Motif confirmation by HMMer
hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file: /home/niguts/usr02/tshini/ykclst/db/Pfam_fs
Sequence file: hmm5c/seq/ZK945.1
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Query: ZK945.1 CE01731 esterase status:Confirmed SW:Q09621 protein_id:CAA88435.1
Scores for sequence family classification (score includes all domains):
Model Description Score E-value N
-------- ----------- ----- ------- ---
beta-lactamase Beta-lactamase 293.4 2.7e-84 1
C6 C6 domain 7.7 1 1
Parsed for domains:
Model Domain seq-f seq-t hmm-f hmm-t score E-value
-------- ------- ----- ----- ----- ----- ----- -------
C6 1/1 37 53 .. 80 100 .] 7.7 1
beta-lactamase 1/1 79 448 .. 1 375 [] 293.4 2.7e-84
Alignments of top-scoring domains:
C6: domain 1 of 1, from 37 to 53: score 7.7, E = 1
*->sngqWvytsistgtvvtsvsC<-*
++g+W t+v+s++C
ZK945.1 37 VSGAWLV----VATTVDSLAC 53
beta-lactamase: domain 1 of 1, from 79 to 448: score 293.4, E = 2.7e-84
*->ldrlieelmaddvdggipGvavavvrdGkvvvdagggaaygndcrrG
++r+++++++ + G+++ v+++++v+vd+ g G
ZK945.1 79 FRRNFADGWE------REGASITVYHKDRVIVDLQG----------G 109
vadletgrpvtpdTlFriaSvtKtfTAtavlqLveeGksildLDdPVytk
+ad+++gr++tpdT+ ++S+tK++ A++v++Lv++G+ +++Dd+
ZK945.1 110 YADKASGRKWTPDTRTVVFSTTKAVGAVCVAMLVDRGH--ISYDDKM--- 154
dsvyPvtekYlPgFpedslpvvgvppfgpefag.gkgpvTlrhLLtHtsG
s k + pefa++gk+++T+ +L++H++G
ZK945.1 155 -S------KIW-----------------PEFAQnGKENITIDWLMSHRAG 180
lpdyapd.le.daady.elvralaalpplypPGtrfgYsNtgyglLLGel
l++++ + +++da+d +++ +++a+++p ++PGt+ gY++++yg++++++
ZK945.1 181 LAALDMPiTIeDANDFeKMSEVIASQKPNWEPGTKSGYHAITYGWIVDQI 230
vervtgkGvqsyeellrerilrPLgmtdtglgppesedprdaagyggag.
v+r ++kG +s +++++e++++ ++ d+++g+p+se++++ ++ +
ZK945.1 231 VRRSDPKG-RSVGRFFKEEVADV-HGIDFHIGLPPSEEHTVSRLSMPSTl 278
pvrv.p.pld........................................
++ +++ + + +++++ +++ +++++ + + ++ +++
ZK945.1 279 HLVReIvHDPrvlivlavfnlrppnsiarkiaanptwfkleqdvntfnnp 328
............istarDLarflqgllagglallgglllsaa.laqlt.w
+ ++ ++ +i+ rDLar++ + +g+l s + l++++
ZK945.1 329 tlhameqvaalgITKSRDLARLF-------SLVQQGKLFSTElLEKFRaP 371
lr.gtt.v.giragygweGlGwvladkggga.pglfgHtGswplgggfgt
+++g ++v ++ G+G+ + ++ g++++l+gH+G ++g+
ZK945.1 372 QVqGIDeVvMTPLPK---GHGFLYERHPMGGkKWLVGHPG------YGGS 412
ylavdPerAVvWPPgaglgvvvltNr.gpnpda.adarlialaaa<-*
+++d e g+++++++N+ ++ + ++ +++++l
ZK945.1 413 TVMMDLED--------GITIAYVSNGlKT-GMGeLTRTYRHLRDS 448