hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /home/niguts/usr02/tshini/ykclst/db/Pfam_fs
Sequence file:            hmm5c/seq/ZK858.5
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Query:  ZK858.5  CE15429    status:Partially_confirmed TR:Q94421 protein_id:CAB02140.1

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N
-------- -----------                                    -----    ------- ---
TM2      TM2 domain                                      66.8    1.4e-16   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
TM2        1/1       6    55 ..     1    52 []    66.8  1.4e-16

Alignments of top-scoring domains:
TM2: domain 1 of 1, from 6 to 55: score 66.8, E = 1.4e-16
                   *->tgykklialllllflGifGlhRFYlGqigkGilfLftfwlgilgigw
                      t++k +i+ ++l++ G+fG+hR+Yl+q+ ++++f++t  lg+l+igw
     ZK858.5     6    TEVKPWIVRIILIVGGLFGAHRLYLKQVPEAFVFFST--LGVLLIGW 50

                   lidli<-*
                   l+d++
     ZK858.5    51 LYDSF    55

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