hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /home/niguts/usr02/tshini/ykclst/db/Pfam_fs
Sequence file:            hmm5b/seq/ZK678.5
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Query:  ZK678.5  CE24735  locus:wrt-4 Hint module status:Partially_confirmed TR:Q94410 protein_id:CAB01902.2

Scores for sequence family classification (score includes all domains):
Model         Description                               Score    E-value  N
--------      -----------                               -----    ------- ---
Hint          Hint module                               389.3     6e-120   1
Man-6-P_recep Cation-dependent mannose-6-phosphate re     2.2          9   1

Parsed for domains:
Model         Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------      ------- ----- -----    ----- -----      -----  -------
Man-6-P_recep   1/1     436   453 ..   154   171 ..     2.2        9
Hint            1/1     327   547 ..     1   239 []   389.3   6e-120

Alignments of top-scoring domains:
Man-6-P_recep: domain 1 of 1, from 436 to 453: score 2.2, E = 9
                   *->nFnPvsEERGKvqDCFYL<-*
                      n nPv  ER  + DCFY+
     ZK678.5   436    NANPVPAERVNIGDCFYI    453

Hint: domain 1 of 1, from 327 to 547: score 389.3, E = 6e-120
                   *->AenSvAAkllaplGvqsGGCFPGdAtVtledGgrKplkdLkpGDrVL
                      A++++A++++ap+G+q+++CFPGdA+V++++Gg+K++++L +GD+V+
     ZK678.5   327    APAGYAPMGFAPSGLQLYYCFPGDAMVNVYNGGFKRMDELAVGDWVQ 373

                   AaDeagGrlvySdvLlFLDRepeqravFyvIeTedgpekltLTpaHLlFv
                   A+D++g ++++ +v+++L+R+p+q+a+F+++++++g e+++LT++HL+Fv
     ZK678.5   374 ALDKNGSQVTFIPVQYWLHRDPKQVADFVEFTLDNG-ETFSLTEKHLVFV 422

                   adcsv.nkstPeyikSsgsmgpagfravFAsrvrpGdcvlvadkekggkl
                   ++csv++++++          +++ ++v+A+rv++Gdc+++a+++k++++
     ZK678.5   423 TQCSVpYSEDE----------NINANPVPAERVNIGDCFYIAHRKKSQMY 462

                   rpvkVvrvsreeatGiYAPLTahGTivVndVlASCYAvIeshsLAhwaFa
                   ++vkV++++++++tGiY+P+T++G+++V++++ASC+++ +++sL++++F+
     ZK678.5   463 QRVKVLDINIVQKTGIYSPMTSRGHLLVDRIHASCHSETDNYSLQNTFFT 512

                   PylRLlssLlsflgpqdssaatqqeGvHWYsnlLYglgtllld<-*
                   ++lR++s++++++++         e++++++n++Ygl+ ++ +
     ZK678.5   513 NVLRWKSQIRNYFWT--------VEDSTNEDNIGYGLNGVMAV    547

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