Motif confirmation by HMMer
hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file: /home/niguts/usr02/tshini/ykclst/db/Pfam_fs
Sequence file: hmm5/seq/ZK455.4
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Query: ZK455.4 CE31674 sphingomyelin phosphodiesterase status:Partially_confirmed TN:CAA91493 protein_id:CAA91493.2
Scores for sequence family classification (score includes all domains):
Model Description Score E-value N
-------- ----------- ----- ------- ---
Metallophos Calcineurin-like phosphoesterase 60.1 8.6e-15 1
SapB_1 Saposin-like type B, region 1 40.9 8.3e-11 1
Parsed for domains:
Model Domain seq-f seq-t hmm-f hmm-t score E-value
-------- ------- ----- ----- ----- ----- ----- -------
SapB_1 1/1 69 107 .. 1 39 [] 40.9 8.3e-11
Metallophos 1/1 182 465 .. 1 124 [] 60.1 8.6e-15
Alignments of top-scoring domains:
SapB_1: domain 1 of 1, from 69 to 107: score 40.9, E = 8.3e-11
*->dilCelCemvVkevenlLkdnkTqeeIlkaLeklCdlLP<-*
++ C +C ++V+ v+ l+++n T++eI ++L +lCdl
ZK455.4 69 KMSCLFCTFAVDGVQALIAQNSTDNEIAAFLVNLCDLFD 107
Metallophos: domain 1 of 1, from 182 to 465: score 60.1, E = 8.6e-15
*->mrilvigDlHggfedl...............................
+++l+++D+H+++ + +++ ++ ++ ++ + ++ + +
ZK455.4 182 FKVLHLSDIHIDHQYVvgteaycqldsalgtyamccrdysqdsqgap 228
..............................llllela.e.kpdlvlflGD
++ ++++ + ++ + + + + + ++ + ++ ++ d+++++GD
ZK455.4 229 tnlkdkpiyvpagpwgmpylcdlpyqtfesAMKHISKtFkDLDYIIITGD 278
lvdrgppslevllll........falklkapgpvylvrGNHDfdsgnsvy
+ ++++ ++l ++ ++ ++++l+ +++pvy+ GNH+ + + +
ZK455.4 279 FEAHDSWDYTEDLTRenmnnmtnVFLEYFPGVPVYVSIGNHEGVPQDAMA 328
..................................................
++ + ++ ++ + ++ + ++++ + + + ++ +++++ +
ZK455.4 329 phtmpeydtrgpqwlykimsemwshwipqealdtvqyrasyavypkpglk 378
........................welfleef.lllla.lvdgkillvHg
+ + + + ++++ + + ++++ l + +++l +++++ +++++H
ZK455.4 379 lislntiycsefnfylyvnevdpdATLEWLIEeLQDSEnKGELVHIISHI 428
glspd...........leellk.ngvdlvirGHtH.p<-*
++ + ++++++ + ++n + ++GHtH +
ZK455.4 429 PPGDNyclkgwswnffEIVKRYeNTIAQMFYGHTHyD 465