hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /home/niguts/usr02/tshini/ykclst/db/Pfam_fs
Sequence file:            hmm5/seq/ZK1320.9
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Query:  ZK1320.9  CE01707   acetate utilisation protein status:Confirmed TR:Q09657 protein_id:CAA87047.1

Scores for sequence family classification (score includes all domains):
Model           Description                             Score    E-value  N
--------        -----------                             -----    ------- ---
AcetylCoA_hydro Acetyl-CoA hydrolase/transferase        247.9    1.4e-70   1
CK_II_beta      Casein kinase II regulatory subunit       4.2        7.7   1
Peptidase_C6    Helper component proteinase               1.9       0.86   1

Parsed for domains:
Model           Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------        ------- ----- -----    ----- -----      -----  -------
Peptidase_C6      1/1     359   370 ..     1    13 [.     1.9     0.86
CK_II_beta        1/1     421   432 ..   115   126 ..     4.2      7.7
AcetylCoA_hydro   1/1     111   461 ..    93   505 ..   247.9  1.4e-70

Alignments of top-scoring domains:
Peptidase_C6: domain 1 of 1, from 359 to 370: score 1.9, E = 0.86
                   *->SdditgeqFWkGf<-*
                      Sd ++g++F++Gf
    ZK1320.9   359    SD-SIGRNFFSGF    370

CK_II_beta: domain 1 of 1, from 421 to 432: score 4.2, E = 7.7
                   *->HARYILTerGLq<-*
                      HARYI Te G++
    ZK1320.9   421    HARYIVTEHGIA    432

AcetylCoA_hydro: domain 1 of 1, from 111 to 461: score 247.9, E = 1.4e-70
                   *->apkqsgellrkainqGlvsfvdkhlsevpqlleygFvpdeRkDnkiI
                      ++ ++  + rk +n G++++++++lsevp l + g           +
    ZK1320.9   111    NSLFICPGNRKNVNLGAADYTPIFLSEVPSLYTSGTLN--------V 149

                   DvAlIettaldehGrvylnfGvgnaPeflvdivKviiEvNhyadPrvAel
                   D AlI  +++de G  + ++Gv       +d   +++          A +
    ZK1320.9   150 DFALITVSPPDELG--FCTLGVD------IDTTLAAATS--------AKK 183

                   vvivvpsnpPrvngGydefiaidkvGvDYIvvDpekvVavvpfllpdakn
                    ++ v+s +Pr  g      + +      ++ D   ++a+  +    +
    ZK1320.9   184 IIALVNSTMPRTRG--HTTVHSSHF-AAMVQTDR--PIAFRQSGGEEMS- 227

                   mntPeDeqnPMsrmIAenivefvasevkhGRLiedgltLQvGiGnIpnAV
                       e e          +i++  a+      L  +g tLQ GiG Ip+
    ZK1320.9   228 ----ETE---------QRIGKIIAE-----NLVDNGATLQLGIGAIPDSA 259

                   vemLgeaglKnLgvhTEvlqDglleLlEeGavtnsqktldRGKsVftfal
                   ++  +    K+LgvhTE+ +Dg+++L+  G+++n+ k    GK V +fa
    ZK1320.9   260 LAAMKQH--KDLGVHTEMFSDGVIDLIDRGIINNQKKAFMPGKTVSSFAF 307

                   GsrklYdyldrnpeRvalRpvdytNNPeiIarqpkmiAlNqalEiDlyGq
                   G+   Y   d+npe   + p d tN   i++r  km ++N+a+EiDl+Gq
    ZK1320.9   308 GTKEFYKKIDNNPE-FYFAPCDFTNHIDIVRRNSKMTSINSAIEIDLTGQ 356

                   aNStqvggvsPsGKlyllsGiGGqaDFvrgAvlSnd..rqgisalpsyat
                   + S ++g +       + sG GGq DF+      +d+ +++i alps  t
    ZK1320.9   357 IVSDSIGRN-------FFSGFGGQVDFMAASPHGFDglGKAIIALPSRTT 399

                   engISrIvPmlshGagVtvprhdvqvvvTEqGiAyLrGLsikeRAraiIa
                   ++ +  IvP+l  G gV  +r    ++vTE GiA L G+si++RA ++I+
    ZK1320.9   400 KGQT-KIVPFLTQGSGVVTTRAHARYIVTEHGIANLWGKSIRQRAYELIQ 448

                   klAHPdyRaLLtdwLeRa<-*
                    + HPd R    + Le a
    ZK1320.9   449 -ISHPDDR----EALEKA    461

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