hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /home/niguts/usr02/tshini/ykclst/db/Pfam_fs
Sequence file:            hmm5/seq/ZC328.3
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Query:  ZC328.3  CE15185    status:Partially_confirmed TR:O02054 protein_id:AAK39377.1

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N
-------- -----------                                    -----    ------- ---
GRAM     GRAM domain                                     92.5    1.5e-25   1
ACCA     Acetyl co-enzyme A carboxylase carboxyltrans     5.3          4   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
GRAM       1/1      74   144 ..     1    86 []    92.5  1.5e-25
ACCA       1/1     540   560 ..     1    21 [.     5.3        4

Alignments of top-scoring domains:
GRAM: domain 1 of 1, from 74 to 144: score 92.5, E = 1.5e-25
                   *->ekfrkhFke..ilppeEkLiadckkeVtysCplqrsfreeskipvqG
                      ++f+k+F +++ + +++  +a+      ysC++qr      +i++qG
     ZC328.3    74    LQFKKIFVDkgLIEENDQFLAS------YSCAYQR------EILAQG 108

                   rlYlTnnrlcFrSdllgdltkegviklviPladiesvekek<-*
                   r++++ +++cF++++ g++t     +lviP+++i+ v+k+k
     ZC328.3   109 RMFISQFNVCFYANIIGWET-----TLVIPMKEISLVKKMK    144

ACCA: domain 1 of 1, from 540 to 560: score 5.3, E = 4
                   *->vlLeFEkplaELEekIeeLrk<-*
                      +l++ +++++ L+ek+++++k
     ZC328.3   540    MLSTLMDQVKQLKEKVDQIKK    560

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