Motif confirmation by HMMer
hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file: /home/niguts/usr02/tshini/ykclst/db/Pfam_fs
Sequence file: hmm5/seq/Y87G2A.8
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Query: Y87G2A.8 CE24687 glucose-6-phosphate isomerase status:Confirmed TR:Q9U1Q2 protein_id:CAB60430.1
Scores for sequence family classification (score includes all domains):
Model Description Score E-value N
-------- ----------- ----- ------- ---
PGI Phosphoglucose isomerase 1036.7 0 1
Parsed for domains:
Model Domain seq-f seq-t hmm-f hmm-t score E-value
-------- ------- ----- ----- ----- ----- ----- -------
PGI 1/1 53 544 .. 1 513 [] 1036.7 0
Alignments of top-scoring domains:
PGI: domain 1 of 1, from 53 to 544: score 1036.7, E = 0
*->DYSKnhiddeilsaLlkLaeeaklkaareamFnGekiNvTEnRaVlH
D+SKn+i+de + L++La+++++++ r amF+ ekiN+TEnRaVlH
Y87G2A.8 53 DFSKNRITDESFQLLMRLAKSRGVEESRNAMFSAEKINFTENRAVLH 99
vALRnrsnrpilvdGkdvvpeVdkvldkmKefservrsGawkGytgkait
vALRnr nrpilvdGkdv+p+V+ vl++mKef+ ++ sG+w Gytgk it
Y87G2A.8 100 VALRNRANRPILVDGKDVMPDVNRVLAHMKEFCNEIISGSWTGYTGKKIT 149
dvvnIGIGGSdLGPlmvteALkpyseralnakgRedtdlkvffvsNvDgt
dvvnIGIGGSdLGPlmvte Lk y + ++v+fvsNvDgt
Y87G2A.8 150 DVVNIGIGGSDLGPLMVTESLKNYQIG-----------PNVHFVSNVDGT 188
hiaevLkklnpettliiVaSKTFTTaETmtNArsarewllkklgeGieks
h+aev kkln ettl+i+aSKTFTT+ET+tNA++a+ew+l k+g+ +
Y87G2A.8 189 HVAEVTKKLNAETTLFIIASKTFTTQETITNAETAKEWFLAKAGD---AG 235
avaKhfvAlStNakkvekfGIDteGYnmFaFwDwVGGRYSvwSAiGlLpi
avaKhfvAlStN +k+ +fGID++ nmF+FwDwVGGRYS+wSAiG L+i
Y87G2A.8 236 AVAKHFVALSTNVTKAVEFGIDEK--NMFEFWDWVGGRYSLWSAIG-LSI 282
aLsiGfenfeelLeGAasmdkhFlstplEkNiPvllAlvgvwyvnflGaq
a++iGf+n e+lL GA s+d+hF++tplEkNiPv lA++gv y+n Ga+
Y87G2A.8 283 AVHIGFDNYEKLLDGAFSVDEHFVNTPLEKNIPVILAMIGVLYNNIYGAE 332
thailpYdqyLhrlaaYlQQLsMESNGKgVdrdGvlvdlqtGsIdFGEpG
tha+lpYdqy hr+aaY+QQ++MESNGK V+r G +vd++tG+I++GEpG
Y87G2A.8 333 THALLPYDQYMHRFAAYFQQGDMESNGKFVTRHGQRVDYSTGPIVWGEPG 382
TngQHsfyQLIHQGtrliPcdFIlavksqnPvylkienlvhhkellsNFf
TngQH+fyQLIHQGtrliP dFI++vk+ n +i+ ++hh++ll+NF+
Y87G2A.8 383 TNGQHAFYQLIHQGTRLIPADFIAPVKTLN----PIRGGLHHQILLANFL 428
AQteALavGKtpeevnkelvkgGkSaddietLlPhktFtGnrPslsIllp
AQteAL+ GKt+ +++el +G+S++ i ++lPhk+F+Gn+P++sI+lp
Y87G2A.8 429 AQTEALMKGKTAAVAEAELKSSGMSPESIAKILPHKVFEGNKPTTSIVLP 478
eLtpytLGaLiafYEHkvfvqGvlwGINSFDQwGVELGKvlAkailpeLe
tp+tLGaLiafYEHk+fvqG++w+I S+DQwGVELGK+lAk i peL+
Y87G2A.8 479 VVTPFTLGALIAFYEHKIFVQGIIWDICSYDQWGVELGKQLAKVIQPELA 528
gsrkvsgfdssTngLi<-*
+ v+++d+sTngLi
Y87G2A.8 529 SADTVTSHDASTNGLI 544