hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /home/niguts/usr02/tshini/ykclst/db/Pfam_fs
Sequence file:            hmm5/seq/Y69H2.4
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Query:  Y69H2.4  CE22822    status:Partially_confirmed TR:Q9U1U6 protein_id:CAB63401.1

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N
-------- -----------                                    -----    ------- ---
TIL      Trypsin Inhibitor like cysteine rich domain    106.4    4.2e-32   4
EB       EB module                                        7.6        2.6   2

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
TIL        1/4     215   270 ..     1    67 []    30.2  3.7e-08
EB         1/2     308   321 ..    47    63 .]     8.5      1.5
TIL        2/4     274   327 ..     1    67 []    28.9    1e-07
TIL        3/4     337   393 ..     1    67 []    30.5    3e-08
EB         2/2     433   447 ..    47    63 .]     5.9      7.1
TIL        4/4     399   453 .]     1    67 []    40.8  1.8e-11

Alignments of top-scoring domains:
TIL: domain 1 of 4, from 215 to 270: score 30.2, E = 3.7e-08
                   *->CpaneqyteCgpsCepsCsnpdgplettppCegtSpkvPstCkegCv
                      C +n++ ++C++ C +  +   g ++   +C+       + C+ gC+
     Y69H2.4   215    CAKNQTMSDCLNTCSEDKCP--G-MSKSMMCT-------KHCGQGCA 251

                   CqpGyVrnndgdkCVprseC<-*
                   C +Gy+r++dg  C ++ +C
     Y69H2.4   252 CASGYLRSSDG-ECYKPKDC    270

EB: domain 1 of 2, from 308 to 321: score 8.5, E = 1.5
                   *->CeCpegvpkttrvngvC<-*
                      C C +g   ++ +ng+C
     Y69H2.4   308    CICAPG---FVKKNGKC    321

TIL: domain 2 of 4, from 274 to 327: score 28.9, E = 1e-07
                   *->CpaneqyteCgpsCepsCsnpdgplettppCegtSpkvPstCkegCv
                      C+ ne+y +C   C  +C np+      p+C+  +pk  ++Ck+ C+
     Y69H2.4   274    CGQNEEY-RCEK-CAGTCKNPE------PNCP--GPKN-KSCKRACI 309

                   CqpGyVrnndgdkCVprseC<-*
                   C pG+V +n   kCV  ++C
     Y69H2.4   310 CAPGFVKKNG--KCVTLASC    327

TIL: domain 3 of 4, from 337 to 393: score 30.5, E = 3e-08
                   *->CpaneqyteCgpsCepsCsnpdgplettppCegtSpkvPstCkegCv
                      C   ++yt+C+p C+  Cs         ++Ce t+ +  ++C +gCv
     Y69H2.4   337    CLGTQEYTDCMPKCQQLCSG-------AQQCE-TGMEI-AMCTPGCV 374

                   CqpGyVrnndgdkCVprseC<-*
                   C+p y ++++g  CV  ++C
     Y69H2.4   375 CRPNYKLDSNG-DCVHNRHC    393

EB: domain 2 of 2, from 433 to 447: score 5.9, E = 7.1
                   *->CeCpegvpkttrvngvC<-*
                      C C +g  + ++ ng C
     Y69H2.4   433    CVCADG--FARNNNGTC    447

TIL: domain 4 of 4, from 399 to 453: score 40.8, E = 1.8e-11
                   *->CpaneqyteCgpsCepsCsnpdgplettppCegtSpkvPstCkegCv
                      Cp ne++++C++  + +C+     ++  ++ +       ++C +gCv
     Y69H2.4   399    CPDNEEWSKCLS-NDNQCDLAS--ISMIAN-K-------DQCFSGCV 434

                   CqpGyVrnndgdkCVprseC<-*
                   C +G+ rnn+g +CV   +C
     Y69H2.4   435 CADGFARNNNG-TCVASDKC    453

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