hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /home/niguts/usr02/tshini/ykclst/db/Pfam_fs
Sequence file:            hmm5/seq/Y39F10B.1
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Query:  Y39F10B.1  CE24242    status:Partially_confirmed TR:Q9N510 protein_id:AAF60535.1

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N
-------- -----------                                    -----    ------- ---
C2       C2 domain                                       46.3    6.5e-12   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
C2         1/1      55   139 ..     1    88 []    46.3  6.5e-12

Alignments of top-scoring domains:
C2: domain 1 of 1, from 55 to 139: score 46.3, E = 6.5e-12
                   *->LrVtvieAknLppkDkkngksDPYVkvslggdpkd.qkkkTkvikkt
                      +  ++  A++L  k+  +++ D+Y++v+l g ++ +++  T v +
   Y39F10B.1    55    MLAHITAARGLYMKN--KSSLDAYATVTLQGKGSLrSRCSTDVLNTE 99

                   lNPvWNEtFtFevpppdlqetLeitVyDydrfgrddflGevs<-*
                    + +W+E+++F    +++++ +++ V+ + ++g ++++G+++
   Y39F10B.1   100 GECRWDEVCEFK-LSDKFNS-VVVAVHAKAKLGTNELIGRCE    139

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