hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /home/niguts/usr02/tshini/ykclst/db/Pfam_fs
Sequence file:            hmm5/seq/W10D5.2
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Query:  W10D5.2  CE14780   NADH-ubiquinone oxidoreductase 20 KD subunit status:Confirmed SW:Q94360 protein_id:CAB02132.1

Scores for sequence family classification (score includes all domains):
Model       Description                                 Score    E-value  N
--------    -----------                                 -----    ------- ---
oxidored_q6 NADH ubiquinone oxidoreductase, 20 Kd sub   222.7    5.6e-63   1

Parsed for domains:
Model       Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------    ------- ----- -----    ----- -----      -----  -------
oxidored_q6   1/1      77   184 ..     1   145 []   222.7  5.6e-63

Alignments of top-scoring domains:
oxidored_q6: domain 1 of 1, from 77 to 184: score 222.7, E = 5.6e-63
                   *->vEvvyaplapryDderfGvilreiPrqaDvalVeGgVtlknaenlel
                      vE++ +  apryD +r+Gv++r++PrqaD+++V+G+Vt+k+a++l++
     W10D5.2    77    VEMM-HFAAPRYDMDRYGVVFRASPRQADLIFVAGTVTNKMAPALRR 122

                   iyeqrpdpKiVIAmGaCAvsGGvfrmrnlggeskeevLqeaYietattkn
                   iy+q+p++K+VI+mG+CA++GG++++
     W10D5.2   123 IYDQMPEAKWVISMGSCANGGGYYHY------------------------ 148

                   kgqvPsepiVPplysvvgPvdkvIPVDvyiPGCPPrPEailyaitall<-
                                ysv +++d+vIPVD+y+PGCPP++Ea+ly++++l+
     W10D5.2   149 ------------AYSVLRGCDRVIPVDIYVPGCPPTAEALLYGVLQLQ   184

                   *

     W10D5.2     -   -

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