hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /home/niguts/usr02/tshini/ykclst/db/Pfam_fs
Sequence file:            hmm4/seq/T24B8.1
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Query:  T24B8.1  CE03709  locus:rpl-32 60S ribosomal protein L32 status:Confirmed TR:Q22716 protein_id:CAA92757.1

Scores for sequence family classification (score includes all domains):
Model          Description                              Score    E-value  N
--------       -----------                              -----    ------- ---
Ribosomal_L32e Ribosomal protein L32                    243.5    6.2e-76   1

Parsed for domains:
Model          Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------       ------- ----- -----    ----- -----      -----  -------
Ribosomal_L32e   1/1      15   124 ..     1   117 []   243.5  6.2e-76

Alignments of top-scoring domains:
Ribosomal_L32e: domain 1 of 1, from 15 to 124: score 243.5, E = 6.2e-76
                   *->kkpkFkRhesdRykRvgnqesWRKPrGidskvRrrfkGkisrimPkI
                      k +kFkRhesdRy+Rv+  +sWRKP+Gid++vRrrf+G+++  mP+I
     T24B8.1    15    KLTKFKRHESDRYRRVA--PSWRKPKGIDNRVRRRFRGMRA--MPTI 57

                   GYgSpkkvRgLhPSGyeevLVhNVkdLEaLdkCMqnketqaarIAStVGa
                   G+gS++++R+++P+Gy++vLV+NVkdL++L+  Mq+++ ++++I+++V+a
     T24B8.1    58 GHGSDRRTRFVLPNGYKKVLVQNVKDLDMLL--MQSYK-YIGEIGHGVSA 104

                   RKRieIverAeeLGIKVlNp<-*
                   ++R+ IverA++L+IK++N
     T24B8.1   105 KSRKGIVERAAQLNIKLTNG    124

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