Motif confirmation by HMMer
hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file: /home/niguts/usr02/tshini/ykclst/db/Pfam_fs
Sequence file: hmm4/seq/T06D8.10
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Query: T06D8.10 CE13311 peroxidase status:Partially_confirmed TR:Q22216 protein_id:CAA88963.1
Scores for sequence family classification (score includes all domains):
Model Description Score E-value N
-------- ----------- ----- ------- ---
An_peroxidase Animal haem peroxidase 1930.6 0 2
vwc von Willebrand factor type C domain 17.0 0.0015 1
aldedh Aldehyde dehydrogenase family 6.3 0.83 1
FtsL Cell division protein FtsL 5.5 3.3 1
PLRV_ORF5 Potato leaf roll virus readthrough prot 5.3 0.54 1
SOR_SNZ SOR/SNZ family 1.8 7.4 1
Parsed for domains:
Model Domain seq-f seq-t hmm-f hmm-t score E-value
-------- ------- ----- ----- ----- ----- ----- -------
SOR_SNZ 1/1 389 439 .. 156 207 .] 1.8 7.4
An_peroxidase 1/2 159 670 .. 1 596 [] 886.9 6.2e-263
aldedh 1/1 701 727 .. 1 28 [. 6.3 0.83
PLRV_ORF5 1/1 1051 1071 .. 430 450 .. 5.3 0.54
FtsL 1/1 1129 1144 .. 1 16 [. 5.5 3.3
An_peroxidase 2/2 846 1386 .. 1 596 [] 1050.7 0
vwc 1/1 1423 1447 .. 1 33 [. 17.0 0.0015
Alignments of top-scoring domains:
SOR_SNZ: domain 1 of 1, from 389 to 439: score 1.8, E = 7.4
*->vrHmrlvneeirklqsl.sedelytvakelaapyeLvkevakkgkLp
+rH ++++++r +++ ++d+ly+ a+++ a v+++ ++ Lp
T06D8.10 389 IRHHNRIADNLRSINRHwTDDKLYEEARKIVAAQ--VQHITYNEFLP 433
vvnfaa<-*
v +
T06D8.10 434 VLLGRE 439
An_peroxidase: domain 1 of 2, from 159 to 670: score 886.9, E = 6.2e-263
*->rYRtlDGtCNNlenPtwGaanspfrRllpPsYdDGidaPRsrsvdgs
+YR++ G+CNN ++P+wGa+++p+ R++ P+Y+DG+++PR+ +++ +
T06D8.10 159 NYRSFSGICNNVARPEWGASHTPMARIVRPDYADGVSEPRA-AAASK 204
pLPsaRvvSrkllsdrdfpipdpkfgtTlmvmqfGQFmaHDitktsssts
pLPs+R +S++++ r+++ ++ + T m+ +++Q++a D++++++ ++
T06D8.10 205 PLPSVRSLSLTIFTPRGEV--HSDV--TTMMGLWMQLIASDMVNIVPFQA 250
PiEengealeCckcdspvspqlshpeCfPIpvppdDPffgqlgvrClpFv
++E +++al+Cck++ ++h+eC +I++p+ DP++++ +++C+p++
T06D8.10 251 VNEGTSSALPCCKRG------FNHSECDAIDIPAADPAYRT-RLNCIPHA 293
RSlpaprtgpqcrlGgpReQlNqaTayiDaSpiYGssaeearklRaFqgG
RS++apr++ crl gpReQ N+a++y+DaS+iYGs++e+a++lR+F++G
T06D8.10 294 RSIIAPREA--CRL-GPREQANFASSYLDASFIYGSNMEKAKQLRTFRNG 340
lLktspdnggpvrlgrdllPldentqdcgsCvyprsaagsgCfiaGDdRv
+L+t + g lP+++ t ++++a++s+C ++G d+v
T06D8.10 341 QLRTAGSI-G-------ELPATDGT-------LQCQATHSRCALSGTDEV 375
nlqpgLaaLHtLflREHNRiAdaLkalNPhWdDErlFQEARkIviAqmQh
n+ p+ aaLHt+f+R+HNRiAd+L+ +N+hW+D++l++EARkIv Aq+Qh
T06D8.10 376 NILPSVAALHTVFIRHHNRIADNLRSINRHWTDDKLYEEARKIVAAQVQH 425
ItynEyLPilLGrelmkkMrANWyGLLGfgLvygplksGyVgyyngYdpn
ItynE+LP+lLGre+m++ +gL+ ++++G+ + +Y++n
T06D8.10 426 ITYNEFLPVLLGRENMRN----------YGLN--LHSAGF---DSNYEMN 460
vQYnpsianEFatAAFRfGHslipgkfplvdendkiyfgkpisnlsgsvr
+ +++nEFa + ++++ l+p++ ++vd n
T06D8.10 461 L--EGTTFNEFAVTITYYFWALLPSEKSFVDFN----------------- 491
LsdlffnpselylilaeggvdqllrGlatqpaGrmLnrvDrfitdevtnk
nps+ly+ +g+ q++r+ +++++ + + + +dev+
T06D8.10 492 ------NPSRLYE----QGPVQIIRQVLNTNI--Y--QPTLRANDEVKSG 527
LFgtrgeppfglDLasinIqRGRDhGlpsYNeyRefCGLpratsFeDLtd
+ +++ ++fglDL+si+ ++GRDhG+p+Y+++R +CGL+r++sF+DL +
T06D8.10 528 FLKDN--HEFGLDLISIALKQGRDHGIPGYTALRASCGLGRIASFNDLRE 575
lispdeenlarLkslYendvdDvDLyVGgllEkpvpGglvGpTfaCIiae
+ p e+++++ +s+Y +v+DvDL+VG l+Ekp++G+lvGpT+aCIi++
T06D8.10 576 IFLP-EVKFEQVSSAYT-RVEDVDLLVGVLAEKPLKGSLVGPTMACIIGK 623
QFqRlrrGDRFwYEngrgkpsgFTpeVQLaeiRKtsLarliCdNtdvlt<
Q+qR+rr+DRFwYEn+ + +sgF+++ QL+eiR+t+La +iC+N+d+ +
T06D8.10 624 QMQRTRRADRFWYENY-FAQSGFNEA-QLSEIRNTKLAEIICSNIDIRR 670
-*
T06D8.10 - -
aldedh: domain 1 of 1, from 701 to 727: score 6.3, E = 0.83
*->ewvdsasgktfevvNPankgevigrvpe<-*
ew d++++ +f++ + + ++vi +++
T06D8.10 701 EWRDAEGKPVFPIRQETI-EKVISLAKR 727
PLRV_ORF5: domain 1 of 1, from 1051 to 1071: score 5.3, E = 0.54
*->keGRdMlEkREiPDFvAPSER<-*
k+ R++lEkR +P FvA ER
T06D8.10 1051 KDCRSTLEKRHMPCFVAGDER 1071
FtsL: domain 1 of 1, from 1129 to 1144: score 5.5, E = 3.3
*->LpkiIvkDLftsgklp<-*
LpkiI+ DL+ ++ l+
T06D8.10 1129 LPKIIGLDLLNAQNLV 1144
An_peroxidase: domain 2 of 2, from 846 to 1386: score 1050.7, E = 0
*->rYRtlDGtCNNlenPtwGaanspfrRllpPsYdDGidaPRsrsvdgs
rYRt++G+CNNl++P+++++++p+r+llpP+YdDG+daPR+r+++g+
T06D8.10 846 RYRTFNGWCNNLKFPEYANSFAPLRHLLPPQYDDGFDAPRTRAKSGR 892
pLPsaRvvSrkllsdrdfpipdpkfgtTlmvmqfGQFmaHDitktsssts
pLP++R+vS++++ d+d ++++kf T+mvmqfGQ+++H++t++++ ++
T06D8.10 893 PLPNPRRVSNLVCEDKD--VSHVKF--THMVMQFGQLLDHELTHSPVARG 938
PiEengealeCckcdspvspqlshpeCfPIpvppdDPffgq....lgvrC
+n+e+l+C+kcdsp ++++ +C+PI+v++dDPff ++ ++ + rC
T06D8.10 939 ---PNDEILNCTKCDSP---EKISVHCMPIRVEKDDPFFPTnypnGEPRC 982
lpFvRSlpaprtgpqcrlGgpReQlNqaTayiDaSpiYGssaeearklRa
lpF+RSl++ q +l g+R+QlNq+Tay+D+S+iYGs+++ea++lR+
T06D8.10 983 LPFARSLLG-----QLNL-GYRNQLNQLTAYVDGSAIYGSTKCEAKNLRL 1026
FqgGlLktspdnggpvrlgrdllPldentqdcgsCvyprsaagsgCfiaG
F+ GlL ++++++g+++l+ + ++e+ dc+s+ ++++++Cf+aG
T06D8.10 1027 FTRGLLNFTDFGHGQMMLP---QGNQEK--DCRSTL---EKRHMPCFVAG 1068
DdRvnlqpgLaaLHtLflREHNRiAdaLkalNPhWdDErlFQEARkIviA
D+R+++qpgL+++Ht+f+REHNRiA++L+alNP+W+D+++F+EAR+Iv A
T06D8.10 1069 DERNSHQPGLTIMHTFFVREHNRIAMQLSALNPQWNDDTVFEEARRIVTA 1118
qmQhItynEyLPilLGrelmkkMrANWyGLLGfgLvygplksGyVgyyng
+mQhIt+ E+LP+++G +l+++ ++Lv p+k+G y++g
T06D8.10 1119 EMQHITFAEFLPKIIGLDLLNA----------QNLV--PKKNG---YFGG 1153
YdpnvQYnpsianEFatAAFRfGHslipgkfplvdendkiyfgkpisnls
Yd+++ ++si+++FatAAFRfGH+li+++fp++++n +k++ s
T06D8.10 1154 YDNTC--DASISQPFATAAFRFGHTLIRRMFPRMNYN-----YKNM---S 1193
gsvrLsdlffnpselylilaeggvdqllrGlatqpaGrmLnrvDrfitde
+ v+L+++f++ + ly+ +++gg+d++l+Gl+++p+ m ++Dr+itd+
T06D8.10 1194 EPVDLAQHFGHVGPLYE-QEKGGMDSMLMGLLGTPS--M--AFDRHITDA 1238
vtnkLFgtrgeppfglDLasinIqRGRDhGlpsYNeyRefCGLpratsFe
v+n+LF++rge+ +g+DL+++nI R+RDhG+++YN++RefCGL+ra++++
T06D8.10 1239 VRNHLFMRRGEKTSGMDLIVLNILRARDHGVQPYNDLREFCGLRRAVKWD 1288
DLtdlispdeenlarLkslYendvdDvDLyVGgllEkpvpGglvGpTfaC
DL++++++ +n+++L+slYe +vdDvDL++G+++E+p++G+l+G+T++C
T06D8.10 1289 DLKGEMDQ--DNINILQSLYE-SVDDVDLFPGLVSERPLRGALLGTTMSC 1335
IiaeQFqRlrrGDRFwYEngrgkpsgFTpeVQLaeiRKtsLarliCdNtd
IiaeQF Rl+++DRF+YEn + + +FTp QL+eiRK++La+++C+N++
T06D8.10 1336 IIAEQFGRLKKCDRFYYEND-NSAAKFTPG-QLNEIRKVKLASIFCSNSK 1383
vlt<-*
+l+
T06D8.10 1384 YLK 1386
vwc: domain 1 of 1, from 1423 to 1447: score 17.0, E = 0.0015
*->CvqnGvvYengetWkpdsqPnGvdkCtyiCtCd<-*
C nG++++ g++ + + C +CtC+
T06D8.10 1423 CEMNGKIIALGDSVHMTP-------CV-TCTCT 1447