hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /home/niguts/usr02/tshini/ykclst/db/Pfam_fs
Sequence file:            hmm4/seq/M03D4.6
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Query:  M03D4.6  CE28619    status:Partially_confirmed TR:Q21495 protein_id:AAC24409.2

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N
-------- -----------                                    -----    ------- ---
Piwi     Piwi domain                                    417.0   1.7e-121   1
PAZ      PAZ domain                                     162.4    1.8e-45   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PAZ        1/1      45   183 ..     1   161 []   162.4  1.8e-45
Piwi       1/1     193   488 ..     1   341 []   417.0 1.7e-121

Alignments of top-scoring domains:
PAZ: domain 1 of 1, from 45 to 183: score 162.4, E = 1.8e-45
                   *->lpvlelledyltertsiklsdrdrkkvkealkGlkVetthrnnkglq
                      +p++el+++y++++++ik+++rd+kk+++a+kGl++ +++++nk+lq
     M03D4.6    45    QPLSELIMSYNLYYHGIKCNSRDGKKLSQAFKGLNISVNYGKNKNLQ 91

                   eaprkykiaglssnpaplskFplkdnnGneegkeitvaeYFkekYnirLk
                   e+++++ki+g+s+++++ ++F++++       +eitv+ YF++k++i+L+
     M03D4.6    92 EDAVMFKIKGFSHSSRE-QRFVNEG-------VEITVESYFRRKFGIHLR 133

                   ypdlPllvvggrsknlNlLPRfnkrnsqknylPpELcsivpgQrytkklf
                   yp+l+++v++gr++                y+PpEL+ ++p Q++  +
     M03D4.6   134 YPELMTVVAEGRTSL--------------LYFPPELMLCSPSQKMASASP 169

                   erqtsalikkraqr<-*
                   +  +  + +    +
     M03D4.6   170 FIRHDVTERLVEEV    183

Piwi: domain 1 of 1, from 193 to 488: score 417.0, E = 1.7e-121
                   *->livvvlpddnkedlekflydeiKkreltelgipsQcvllktlkkksk
                      +i v+ +++++ ++++    +i++r+ +e+++++Q +++ t++ +
     M03D4.6   193    FITVGESVEVDGIVLP--TPRIFFRDGQETSLNNQSFRNPTDFAQ-- 235

                   qGgrltltNvilkanmKlGGlNyklniekeprckVCNemrviplkptlii
                          t+++++a+++lGGlNy++n+e+++            ++++l i
     M03D4.6   236 -------TGFFVDAKQQLGGLNYVVNSETWN------------DSGLLLI 266

                   GfDvshppaRTkfDrenggrlnnpsvagvvasmdsphgtkfrgdvrlqpa
                   G+ ++ +         n++ ++n++++g+v+++++ h++kf+g+++++++
     M03D4.6   267 GLSTAPY--------LNSYSSENVTTIGFVSNTMD-HPQKFAGGYKYVKS 307

                   gqElltdlkkgiiresLrsfykntrkkkPkrIivYRDGvSEGqfsqvlny
                   g++++++++++i+++sLrs++k+++  kP++I++Y +G+SE++fs v+++
     M03D4.6   308 GSDVFGQVMPEILLNSLRSARKARK-IKPMNIVIYLCGMSESRFSIVKEE 356

                   EvnqikeackklsesyqeqePkltvIvvqKrHhtRfFasdksdggskaka
                   +v++++ ++k+l+e+y    P+lt+Iv +K H+tR++a++++d+
     M03D4.6   357 YVRNCHSVFKTLGEKYS---PQLTIIVGSKGHSTRLYARGERDQ-----I 398

                   qNvpPGTvVDdkitspeyydFylcsqagrqGTvkPthYtVlyDdigeyyl
                    N++PGT+VD++i+sp+y+ F++c++++rqGT+k+t+YtVly +++
     M03D4.6   399 SNLQPGTIVDSVIVSPDYNKFFHCGAVARQGTCKATKYTVLYPESP---- 444

                   sadelqdLTykLCymyqrvtrpvslPaPvyYAhllAkrgrnnlk<-*
                   +++++q++T++LCym+ +v++pvslPaP+y   ++A+rg++nl+
     M03D4.6   445 KMEWIQRMTNDLCYMHEIVFHPVSLPAPLYLTAEMAERGTKNLA    488

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