hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /home/niguts/usr02/tshini/ykclst/db/Pfam_fs
Sequence file:            hmm3/seq/K12H4.7a
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Query:  K12H4.7a  CE00272    status:Partially_confirmed SW:P34528 protein_id:AAA28099.1

Scores for sequence family classification (score includes all domains):
Model       Description                                 Score    E-value  N
--------    -----------                                 -----    ------- ---
abhydrolase alpha/beta hydrolase fold                   118.9    1.8e-35   1
OmpH        Outer membrane protein (OmpH-like)            4.8        2.6   1
GBP         Guanylate-binding protein, N-terminal dom     2.0        7.1   1
GASA        Gibberellin regulated protein                 1.1        4.2   1

Parsed for domains:
Model       Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------    ------- ----- -----    ----- -----      -----  -------
GBP           1/1      61    79 ..   266   284 .]     2.0      7.1
OmpH          1/1      76   101 ..     1    27 [.     4.8      2.6
GASA          1/1      74   118 ..     1    49 [.     1.1      4.2
abhydrolase   1/1     201   445 ..     1   232 []   118.9  1.8e-35

Alignments of top-scoring domains:
GBP: domain 1 of 1, from 61 to 79: score 2.0, E = 7.1
                   *->eqvaaFcsYIfseakvKtL<-*
                      ++v+   + If+ ++ KtL
    K12H4.7a    61    KKVEGVSRHIFESGNMKTL    79

OmpH: domain 1 of 1, from 76 to 101: score 4.8, E = 2.6
                   *->kkfllfllLaLallatgsaAqateavk<-*
                      +k+ll++lLa+ +l+++++A ++e ++
    K12H4.7a    76    MKTLLAVLLAACVLTQVLSAPSNE-QR    101

GASA: domain 1 of 1, from 74 to 118: score 1.1, E = 4.2
                   *->vkrsvlillLLivLLtlqelhadnimRsevqsqakgnqkrgg.eGsl
                      + + +l+++LL  ++ +q l+a      + ++ ++ n  rg + G+
    K12H4.7a    74    GNMKTLLAVLLAACVLTQVLSAP-----SNEQRVRRNMIRGRpRGGM 115

                   kki<-*
                   kk+
    K12H4.7a   116 KKT    118

abhydrolase: domain 1 of 1, from 201 to 445: score 118.9, E = 1.8e-35
                   *->frvillDlrGfGeSsp.............sdlaeyrfddlaedleal
                      ++v+ + +r++Ge++p+++ + ++ +  +s +a+ +++++++++ a
    K12H4.7a   201    AWVFDIEHRFYGETHPtsdmsvpnlkylsSAQAIEDAAAFIKAMTAK 247

                   ldalglekpvilvGhSmGGaialayaakyPelrvkalvlvspplpaglss
                   + +l   k ++ +G+S+ Ga+a++ +ak+Pe +v a+v +s+    + ++
    K12H4.7a   248 FPQLANAK-WVTFGGSYSGALAAWTRAKHPE-LVYAAVGSSG---PVQAE 292

                   dlfprqgnleglllanfrnrlsrsveallgralkqffllgrplvsdflkq
                   ++f++  +le ++++++rn +++++++ +++++  + ll++ + +++lk+
    K12H4.7a   293 VDFKE--YLEVVQNSITRN-STECAASVTQGFNLVASLLQTSDGRKQLKT 339

                   aedwlsslirqgeddggdgllga........avalgkllqwdls.alkd.
                   a++++++++    dd+++ +++++  ++  + v+ +++++++++++l+ +
    K12H4.7a   340 AFHLCQDIQM---DDKSLKYFWEtvyspymeVVQYSGDAAGSFAtQLTIs 386

                   ikvPtlviwgtdDplvpldasek.lsalipnaevvviddagHlallekpe
                    +++ + i++  +pl +l+++++ + +  + + + +id+   ++++ k+e
    K12H4.7a   387 HAICRYHINTKSTPLQKLKQVNDyFNQVSGYFGCNDIDY-NGFISFMKDE 435

                   evaeli.kfl<-*
                    ++e+ ++++
    K12H4.7a   436 TFGEAQsDRA    445

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