hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /home/niguts/usr02/tshini/ykclst/db/Pfam_fs
Sequence file:            hmm3/seq/K12G11.3
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Query:  K12G11.3  CE12212   alcohol dehydrogenase status:Confirmed SW:Q17334 protein_id:CAB04604.1

Scores for sequence family classification (score includes all domains):
Model      Description                                  Score    E-value  N
--------   -----------                                  -----    ------- ---
ADH_zinc_N Zinc-binding dehydrogenase                   349.7   3.1e-101   1
adh_short  short chain dehydrogenase                      8.9       0.18   1
TDH        Vibrio thermostable direct hemolysin           5.0        2.3   1

Parsed for domains:
Model      Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------   ------- ----- -----    ----- -----      -----  -------
TDH          1/1      21    37 ..     1    17 [.     5.0      2.3
adh_short    1/1     172   204 ..     1    33 [.     8.9     0.18
ADH_zinc_N   1/1      15   347 ..     1   465 []   349.7 3.1e-101

Alignments of top-scoring domains:
TDH: domain 1 of 1, from 21 to 37: score 5.0, E = 2.3
                   *->ieLPsiPFPsPGsDElL<-*
                      +e+  +P PsP  DE+L
    K12G11.3    21    LEVRQVPVPSPADDEIL    37

adh_short: domain 1 of 1, from 172 to 204: score 8.9, E = 0.18
                   *->tgKvaLvTGassGIGlaiAkrLakeGakVvvvd<-*
                      +g++++ TGa++G+G  + +  +++G++Vv+ d
    K12G11.3   172    PGQIIVLTGAGGGLGSLAIQYACAMGMRVVAMD    204

ADH_zinc_N: domain 1 of 1, from 15 to 347: score 349.7, E = 3.1e-101
                   *->lgg.kpleveevpvpepgpgeVlvkvkaaGiCgsDlhiykgglGlmy
                        +++plev +vpvp p+++e+lvk++++GiC+sDlh++ g+    +
    K12G11.3    15    DTWnGPLEVRQVPVPSPADDEILVKIEYSGICHSDLHVWLGD----L 57

                   pgpkdgthlfpvklPlvlGHEgaGvVveVGsgVtgfklkvgkfkvGDrVv
                   +++        +  Plv+GHEgaG Vv++G++Vtg       ++ GD+ +
    K12G11.3    58 KDM--------SVCPLVGGHEGAGSVVQIGKNVTG-------WQLGDKAG 92

                   vlplvgcCgrgsaeCefCkgsGrenlCpkgraqgpgkGlmpndgfggftp
                   v  ++  C     +CefCk +G+e+lC+++          +n gf ++
    K12G11.3    93 VKLMNFNCL----NCEFCK-KGHEPLCHHI----------QNYGFDRS-- 125

                   kkdgaPckGkdgyhfmgdGgfaEYvvvparrndyfvvkiPdglddeiple
                                     G+f+EY+++       +++ki ++     +l
    K12G11.3   126 ------------------GTFQEYLTIRGV----DAAKINKDT----NLA 149

                   eaeaAallgcaglTaygalvraakvgslppGdtVlVhGaGGGVGlaAvql
                   +   Aa+++cag+T+y+al+++++   +p G+ ++  GaGGG+G++A+q+
    K12G11.3   150 A---AAPILCAGVTVYKALKESNV---AP-GQIIVLTGAGGGLGSLAIQY 192

                   AkaaGAarViavdssedpekklelAkelGAdldadfvnnskglptvnddr
                   A  a++ rV+a d+      k++++k lGA     fv+           +
    K12G11.3   193 AC-AMGMRVVAMDHG----SKEAHCKGLGA---EWFVDAF---------E 225

                   kedfveaikeltgGrngagGvDvvldcsGiglggatldaalallkpgGrl
                   ++d+v +i +lt G     G++ v++   + ++ + +++a+++++++G++
    K12G11.3   226 TPDIVSHITKLTEG-----GPHGVIN---FAVARKPMEQAVEYVRKRGTV 267

                   vlvGpkvavGvpgggaeiplppfdlllkeeeklyersikGsflggrkprl
                   v+v      G+p +   +++++ +++++       ++ikGs++g+r
    K12G11.3   268 VFV------GLPKD-SKVTFDTTPFIFNA------ITIKGSIVGSRL--- 301

                   svlsvdttpdelrealdllasgikdkngkgvldplithtlpplddsleea
                             +  ea++++ +g       +v+ pl+ ++l+       ++
    K12G11.3   302 ----------DVDEAMEFVTRG-------IVKVPLELVKLE-------DV 327

                   neAfellesgkh.gkvvlip<-*
                   ++ ++++ +gk++ + v+++
    K12G11.3   328 PAVYQRMLDGKInSRAVVDF    347

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