hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /home/niguts/usr02/tshini/ykclst/db/Pfam_fs
Sequence file:            hmm3/seq/K08F8.3
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Query:  K08F8.3  CE03469  locus:fut-1 fucosyltransferase status:Partially_confirmed TR:Q21362 protein_id:CAA91285.1

Scores for sequence family classification (score includes all domains):
Model           Description                             Score    E-value  N
--------        -----------                             -----    ------- ---
Glyco_transf_10 Glycosyltransferase family 10 (fucosy   873.4   7.1e-259   1
zf-C3HC4        Zinc finger, C3HC4 type (RING finger)     3.4        2.9   1

Parsed for domains:
Model           Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------        ------- ----- -----    ----- -----      -----  -------
zf-C3HC4          1/1     411   421 ..     1    11 [.     3.4      2.9
Glyco_transf_10   1/1      22   435 ..     1   502 []   873.4 7.1e-259

Alignments of top-scoring domains:
zf-C3HC4: domain 1 of 1, from 411 to 421: score 3.4, E = 2.9
                   *->CrICleelkep<-*
                      C++C++ ++ep
     K08F8.3   411    CQVCRMAWTEP    421

Glyco_transf_10: domain 1 of 1, from 22 to 435: score 873.4, E = 7.1e-259
                   *->lsdaflrllwrekllGllitvppLllaiaawigleeikewkksplyL
                      ++d+flr+lw++++++++it   +ll+i+a+i+++e+k+wk+++++L
     K08F8.3    22    VDDRFLRFLWKYLMFACCIT---YLLVIYAPISKSEQKDWKEGEIEL 65

                   SNDHELdVpiLlilSqapqGSrfptleenrillwtwpFndrg.aPvppsr
                   SNDHELdVpiL++++++pq  ++p++een+++++t++Fn++g++P+++++
     K08F8.3    66 SNDHELDVPILQKEELKPQ--QRPSFEENVPKKKTFNFNPVGkEPFDVEE 113

                   cslsydntarcrltanRselesAdavlFNAGHhrDlskgppmdlppeftq
                   +++s+d+++++r+ta+++++++++++++NAGH++D+++g+p d+++eftq
     K08F8.3   114 VLTSSDIKLEERMTATVIPGQKRLILSWNAGHSQDNLQGCP-DWNCEFTQ 162

                   vrarAedaDavllayednaaaaeaLatdfpRppgQpwVwaSmESPsnsgR
                   vrarA+daDavl+a++dn         df+++p+Q++V++S+ESP+ns
     K08F8.3   163 VRARAPDADAVLIAHMDN---------DFVPKPNQYVVYFSQESPANS-- 201

                   FAVPGFKiNVLNglqilldgyfNwtlSyradsDafhpYGylepltakark
                               g+qi++++y+N+tl++r+d++a++pYGy+++l+ak+rk
     K08F8.3   202 ------------GIQIPRPDYINMTLGFRHDTPAGSPYGYTVKLGAKSRK 239

                   RGFKVqsqvVeaplnlsaKaklaAWVVSNcntrskRerfykqLkkHlqVD
                        ++qvV+a+l +++Kak+aAW+VS+c+t+skRe+f+k+L+kHlq+D
     K08F8.3   240 -----TGQVVDANL-VNGKAKGAAWFVSHCQTNSKREDFVKKLQKHLQID 283

                   vyGrvanplplksgcskGVelietlsqYkFYLaFENSqheDYvTEKlWkN
                   +yG+ ++p+++++g+sk  ++++++++Y+FY++FENS++eDYvTEKlWk+
     K08F8.3   284 IYGG-CGPMKCARGDSK--CDTMLDTDYHFYVTFENSICEDYVTEKLWKS 330

                   AlqagtiPvVLgPsRavyedFvPpksFIhVDDFkSakElAdYLlyLdknp
                   ++q+++iP+VL+  R+++e+FvPp+sFI++DDFkS+kE++dYL+yL++n+
     K08F8.3   331 GYQNTIIPLVLK--RKLVEPFVPPNSFIAIDDFKSVKEMGDYLNYLMNNK 378

                   tAYLDmLYENPLNTLDGKAYFYQDLSFKKILDFFKTILENDTIYHKYseY
                   tA                                            Y+eY
     K08F8.3   379 TA--------------------------------------------YMEY 384

                   FeWRedlrvrlfswdalrVlEydegfCrvCrllqkapdllelSryktipn
                   FeWR+d++v+++++++++VlE+++gfC+vCr+++++p+     ++++ipn
     K08F8.3   385 FEWRHDYKVVFLDGSHHDVLERPWGFCQVCRMAWTEPR-----QKVLIPN 429

                   lakWFq<-*
                   ++++++
     K08F8.3   430 WDAYWR    435

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