hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /home/niguts/usr02/tshini/ykclst/db/Pfam_fs
Sequence file:            hmm3/seq/K06A1.3
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Query:  K06A1.3  CE32057   Cuticulin precursor status:Partially_confirmed TR:Q09586 protein_id:AAC24298.2

Scores for sequence family classification (score includes all domains):
Model          Description                              Score    E-value  N
--------       -----------                              -----    ------- ---
zona_pellucida Zona pellucida-like domain               108.7    1.1e-28   1
DUF361         Protein of unknown function (DUF361)       5.4        4.8   1

Parsed for domains:
Model          Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------       ------- ----- -----    ----- -----      -----  -------
DUF361           1/1     211   241 ..   105   136 .]     5.4      4.8
zona_pellucida   1/1      34   268 ..     1   296 []   108.7  1.1e-28

Alignments of top-scoring domains:
DUF361: domain 1 of 1, from 211 to 241: score 5.4, E = 4.8
                   *->sspIiiYistvsysnnttvnivdkyisNitki<-*
                      s +I+i + + +y+ n t+++v+++  N   +
     K06A1.3   211    SEDIYI-MPNLIYNENRTKAFVNSNAFNFPDQ    241

zona_pellucida: domain 1 of 1, from 34 to 268: score 108.7, E = 1.1e-28
                   *->qCtedGqmvVvvskdllgfpglilssllllgldpsCqpvpsgsteaf
                       C++  +m+++v++ +   p  +++++++  +   C+  +s++
     K06A1.3    34    SCHSG-FMSLKVNTEKS-PPSHVFVKGHF--RKDGCS--FSNT---- 70

                   viFqfplndsCGtt...qvtgdglvYeNtlivSsyevisgppggsItrds
                   +  +f +++ C + ++++ +++g+ Y+ t+      v++++p+  +t++
     K06A1.3    71 ANATFEFSK-CDVMrqrEANPKGMAYTATV------VVQLHPL--FTTKV 111

                   dfrlhvsCswdYprtskvsllavdvtwvpfpptpssepgpltGkftlsLr
                   d +++ +C+  Y++++k + + v v+ ++++  +  +p+p+
     K06A1.3   112 DRAYKLRCF--YKEAEKAVGAEVSVSDPTPVQLEDESPQPV--------- 150

                   LyngctKGcEmddsysspytsgdypvtkkLGdplyvevsvlqrsdpplgl
                             +++++++++++g++  ++ LGd ly+++++    +  +++
     K06A1.3   151 ----------CSYTIHKESPNGPIAKFAQLGDVLYHVWEC---PSEAYQM 187

                   fldsCvATpteDpdpnssprydiidngCcldvddkyltsfspvgsssfps
                    + +C +  +e        +  +i +++c   d +++++++++     +
     K06A1.3   188 EVYNCDVVGGE------EYSKKVIGENGCS-EDIYIMPNLIYN----ENR 226

                   hylrFqfkaFkFvdsssslspLrslVYihCsvkvCdpscp.dsdlcnkaC
                    +++   +aF F+d+        ++V i C+++vC+  ++++    +++C
     K06A1.3   227 TKAFVNSNAFNFPDQ--------NNVRISCKISVCPTLSGtC---HQPKC 265

                   sfn<-*
                     +
     K06A1.3   266 DAS    268

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