hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /home/niguts/usr02/tshini/ykclst/db/Pfam_fs
Sequence file:            hmm3/seq/F58G1.3
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Query:  F58G1.3  CE17923   Protein  phosphatase-1 (PP1) (2 domains) status:Partially_confirmed TR:O62272 protein_id:CAB04521.1

Scores for sequence family classification (score includes all domains):
Model       Description                                 Score    E-value  N
--------    -----------                                 -----    ------- ---
Metallophos Calcineurin-like phosphoesterase            144.8    1.5e-39   1
Fic         Fic protein family                            6.5        2.7   1
COX17       Cytochrome C oxidase copper chaperone (CO     4.5        3.1   1

Parsed for domains:
Model       Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------    ------- ----- -----    ----- -----      -----  -------
Fic           1/1      91   133 ..     1    41 [.     6.5      2.7
Metallophos   1/1      86   258 ..     1   124 []   144.8  1.5e-39
COX17         1/1     305   320 ..     1    16 [.     4.5      3.1

Alignments of top-scoring domains:
Fic: domain 1 of 1, from 91 to 133: score 6.5, E = 2.7
                   *->llelHri..lfeddydwaGqfRttqvakvgnfvfpppeaveal<-*
                      + ++H++ ++++ + d +G++ ++  ++ g++v  +p+++e+l
     F58G1.3    91    IGDIHAQfqDMNRLFDLIGRVPEEKLMFLGDYVDRGPQGIEVL    133

Metallophos: domain 1 of 1, from 86 to 258: score 144.8, E = 1.5e-39
                   *->mrilvigDlHggfedlllllela.e.kpdlvlflGDlvdrgppslev
                      ++i vigD+H +f d ++l++l+++ +   + flGD+vdrgp+ +ev
     F58G1.3    86    APIKVIGDIHAQFQDMNRLFDLIgRvPEEKLMFLGDYVDRGPQGIEV 132

                   llllfalklkapgpvylvrGNHDfdsgnsvy..............welfl
                   l llf+lk+++ +++yl+rGNH+ +s+n+ y+++    ++++ + w+ f+
     F58G1.3   133 LILLFCLKIRYRDRIYLLRGNHETPSVNKIYgfyvecqykygvglWWDFQ 182

                   eef.lllla.lvdgkillvHgglspd........................
                    +f++++  +l+ +++l++Hgglsp+  + +  ++ +++ ++ +++ +
     F58G1.3   183 TCFnRMPMSgLISKRVLCMHGGLSPElinldtirniprpcepldrgisym 232

                   .....leellk.ngvdlvirGHtH.p<-*
                    +++ +e+++k++++dl+irGH+  +
     F58G1.3   233 fgkgvVEQACKsLEIDLIIRGHQVvQ    258

COX17: domain 1 of 1, from 305 to 320: score 4.5, E = 3.1
                   *->Patatpskapaaasia<-*
                      P+++ ++ka+aa++ia
     F58G1.3   305    PPLPDGTKAKAAPAIA    320

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