hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /home/niguts/usr02/tshini/ykclst/db/Pfam_fs
Sequence file:            hmm3/seq/F58A4.10
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Query:  F58A4.10  CE00216  locus:ubc-7 Ubiquitin conjugating enzyme status:Confirmed SW:P34477 protein_id:CAA80166.1

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N
-------- -----------                                    -----    ------- ---
UQ_con   Ubiquitin-conjugating enzyme                   273.7    2.3e-78   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
UQ_con     1/1       1   160 [.     1   181 []   273.7  2.3e-78

Alignments of top-scoring domains:
UQ_con: domain 1 of 1, from 1 to 160: score 273.7, E = 2.3e-78
                   *->ssaatkRLqkElkelqkdppdpkpgisaspvddrddednlfeWeatl
                      + +++  L+k+l+++++    p++g+sa++vd  d+  ++++We++
    F58A4.10     1    MEQSSLLLKKQLADMRR---VPVDGFSAGLVD--DN--DIYKWEVL- 39

                   iiGPpgTpYegGvFkldieFPedYPfkPPkvrfvtpgevkFlTkiyHPNv
                   +iGPp+T+YegG+Fk+ ++FP dYP kPPk+        kF+++i+HPN+
    F58A4.10    40 VIGPPDTLYEGGFFKAILDFPRDYPQKPPKM--------KFISEIWHPNI 81

                   dsenGeiCLsILkdpgDDP.gYelhperWsPaltlrsvLllsiqsLLseP
                   d ++G++C+sIL+dpgDD+ gYe+++erW P++t++++Ll s++s+L++P
    F58A4.10    82 D-KEGNVCISILHDPGDDKwGYERPEERWLPVHTVETILL-SVISMLTDP 129

                   npesPlnaeaGAklykknrGereefekkvrarvek<-*
                   n esP+n++a Ak+ ++n   ++ef+kkv  +v++
    F58A4.10   130 NFESPANVDA-AKMQREN---YAEFKKKVAQCVRR    160

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