hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /home/niguts/usr02/tshini/ykclst/db/Pfam_fs
Sequence file:            hmm3/seq/F54C9.2
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Query:  F54C9.2  CE02252  locus:stc-1 Heat shock 70Kd protein (HSP70) status:Partially_confirmed TR:Q20752 protein_id:CAA90248.1

Scores for sequence family classification (score includes all domains):
Model           Description                             Score    E-value  N
--------        -----------                             -----    ------- ---
HSP70           Hsp70 protein                           370.6   1.2e-107   1
Cys-protease-3C 3C cysteine protease (picornain 3C)       6.4       0.18   1
ketoacyl-synt_C Beta-ketoacyl synthase, C-terminal do     2.9        7.1   1

Parsed for domains:
Model           Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------        ------- ----- -----    ----- -----      -----  -------
ketoacyl-synt_C   1/1     367   383 ..    31    47 ..     2.9      7.1
HSP70             1/1      54   432 ..     1   388 [.   370.6 1.2e-107
Cys-protease-3C   1/1     449   457 ..   175   183 .]     6.4     0.18

Alignments of top-scoring domains:
ketoacyl-synt_C: domain 1 of 1, from 367 to 383: score 2.9, E = 7.1
                   *->rirrALadAgldPedVd<-*
                      +i++ALadA ld +dVd
     F54C9.2   367    PITAALADANLDTADVD    383

HSP70: domain 1 of 1, from 54 to 432: score 370.6, E = 1.2e-107
                   *->viGIDLGTTNScVAVmeg..gkpevIaNaeGnRtTPSvVAFtkkGER
                      + GIDLGTT+S ++++   +g+  ++ ++ G    PSvVAF ++G +
     F54C9.2    54    IAGIDLGTTYSSIGIYHAvtGETIILPDDLGKKSVPSVVAFLPNGTV 100

                   LVGqaAKrQavtNpeNTvfsvKRlIGRrFdd..peVqkdikhvPykvvkd
                   L+G  A  Q+  Np++T++++KR+IGR F+ +++++ +d k  P+k+  d
     F54C9.2   101 LIGTRATEQQEHNPKRTIYDAKRFIGRNFEKnnKDFLSDQKRYPFKINLD 150

                   sngdawveveylGkkktftPeeISAmvLqKmKetAEayLGekVtkAVITV
                   s+g+a  e++    +k+  PeeI++ ++ ++K  A ++LG +  ++VI +
     F54C9.2   151 SEGKAFFEIPLDSGTKNVYPEEIGSLIIGYLKSAAAKHLGVTLGQVVISC 200

                   PAYFNDaQRQATKDAGkIAGLnVlRIiNEPTAAALAYGLDKkdlpeeeke
                   PA FN+ QR  T  A+ IA  +V R+i EPTAAALAYGL+Kk++
     F54C9.2   201 PAEFNEKQRNFTAKAAEIAEMEVRRVISEPTAAALAYGLHKKQG-----V 245

                   rnilVfDLGGGTFDVSiLeigdGVFEVkaTnGDThLGGeDFDnrlvdhlv
                   +n++V+DLGGGT DVS+L +++GVF   a +G+++LGG+DF +r+ +hl+
     F54C9.2   246 ENVVVVDLGGGTLDVSVLWLQGGVFVTQAMAGNNRLGGQDFNDRVQKHLI 295

                   eeFkkk..egiDlskDkrAlqRLreAAEKAKieLSsssqTeinLpfitad
                    +   k +  iD ++D   +q +r + EK Ki L  + +T i+L+  t+
     F54C9.2   296 SKIAEKfgKTIDNKED---IQQIRMEVEKGKIRLTNVPSTTISLNLKTVG 342

                   adGPkhlsetLtRAkFEeLvadLfeRtlePvekaLkDAklsksdIdeVvL
                         ++ +LtR +FE L+ dL++ +  P + aL+DA+l++ d+de+vL
     F54C9.2   343 K-----WNYELTRDEFETLNGDLLKAIELPITAALADANLDTADVDEIVL 387

                   VGGSTRIPkVqelVkefFGdGKePskgvNPDEAVAiGAAvQaGVLsG<-*
                   VGGST +P+V+++V  fF   K ++ gv+P  AV  GA vQaGV  G
     F54C9.2   388 VGGSTQVPAVRKIVGRFFK--KSANYGVDPELAVVTGASVQAGVIGG    432

Cys-protease-3C: domain 1 of 1, from 449 to 457: score 6.4, E = 0.18
                   *->lRrYFteeQ<-*
                      +R++FteeQ
     F54C9.2   449    KRHFFTEEQ    457

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