hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /home/niguts/usr02/tshini/ykclst/db/Pfam_fs
Sequence file:            hmm3/seq/F52F12.6
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Query:  F52F12.6  CE24995   C2HC type zinc finger protein status:Confirmed TR:O02274 protein_id:CAB05737.2

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N
-------- -----------                                    -----    ------- ---
zf-C2HC  Zinc finger, C2HC type                         115.8    8.3e-31   2

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
zf-C2HC    1/2     261   292 ..     1    32 []    61.4  1.9e-14
zf-C2HC    2/2     307   338 ..     1    32 []    62.2  1.1e-14

Alignments of top-scoring domains:
zf-C2HC: domain 1 of 2, from 261 to 292: score 61.4, E = 1.9e-14
                   *->eelkCPtpGCdGsGHvtGkytsHrslsGCPla<-*
                       +l CPtpGCdGsGH tG yt+HrslsGCP++
    F52F12.6   261    GKLACPTPGCDGSGHQTGLYTHHRSLSGCPRR    292

zf-C2HC: domain 2 of 2, from 307 to 338: score 62.2, E = 1.1e-14
                   *->eelkCPtpGCdGsGHvtGkytsHrslsGCPla<-*
                      ++l+C+t+GC+G+GHv+G++tsHrslsGCP+a
    F52F12.6   307    TVLRCTTAGCSGKGHVNGNRTSHRSLSGCPIA    338

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