hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /home/niguts/usr02/tshini/ykclst/db/Pfam_fs
Sequence file:            hmm3/seq/F46F11.5
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Query:  F46F11.5  CE10604   vacuolar ATPase G subunit status:Confirmed SW:P91303 protein_id:AAK21386.1

Scores for sequence family classification (score includes all domains):
Model      Description                                  Score    E-value  N
--------   -----------                                  -----    ------- ---
V-ATPase_G Vacuolar (H+)-ATPase G subunit               198.5    9.4e-56   1

Parsed for domains:
Model      Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------   ------- ----- -----    ----- -----      -----  -------
V-ATPase_G   1/1       2   107 ..     1   108 []   198.5  9.4e-56

Alignments of top-scoring domains:
V-ATPase_G: domain 1 of 1, from 2 to 107: score 198.5, E = 9.4e-56
                   *->aSqtqQgGIQqLLaAEkeAaeiVskARkrKqqRLKQAKeEAekEIee
                      aSqtq  GIQqLLaAEk+Aae++++ARkrK+qR+KQAK+EA++E+e+
    F46F11.5     2    ASQTQ--GIQQLLAAEKRAAEKINEARKRKLQRTKQAKQEAQAEVEK 46

                   YRaqkErEFkrfeaqasGgrgaaeaeleaeTqvkiaelkksaqknkddVv
                   Y++q+E+EFk+fe+q++G+++++e++++++T+++i+++k+s++ nk++V+
    F46F11.5    47 YKQQREAEFKAFEQQYLGTKEDIESKIRRDTEDQISGMKQSVAGNKQAVI 96

                   kmLLklVctvk<-*
                    +LL+lVc++k
    F46F11.5    97 VRLLQLVCDIK    107

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