hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /home/niguts/usr02/tshini/ykclst/db/Pfam_fs
Sequence file:            hmm2/seq/F36F12.1
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Query:  F36F12.1  CE17781    status:Partially_confirmed TR:O76403 protein_id:AAC19200.1

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N
-------- -----------                                    -----    ------- ---
DUF23    Domain of unknown function                     550.1   1.5e-161   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
DUF23      1/1      60   518 .]     1   509 []   550.1 1.5e-161

Alignments of top-scoring domains:
DUF23: domain 1 of 1, from 60 to 518: score 550.1, E = 1.5e-161
                   *->kafiycrYydcnskeigknafasvvsmnk.tf.hipnfpesvvsCpr
                      +afi+++Y++ nsk++gkna+a+v +m+k+ ++++++f + +v++++
    F36F12.1    60    NAFIHNAYFYSNSKSLGKNAVAIVATMHKdAVtDLNDFILKIVGTNS 106

                   rygaktvs.....fyvhhscyyvtvvaganllpnlskleivsigtrvsfe
                   ++ ++t ++ ++++++++sc+y+tv++++n+l+++sklei++++++
    F36F12.1   107 TNRFVTDGkltteQNPDESCKYTTVLIQTNTLDSMSKLEIETRNGL---- 152

                   knegdeveeiPvklirrkkttnvdalspepykeppheltvCvaPlYgaEe
                         v+ +P+ +++                 + +++++C+aPl+++ e
    F36F12.1   153 ------VT-FPFSEPKVQ---------------STKPVVFCIAPLFAS-E 179

                   qWlnfvefvEhyklqGAthFyfYlhsiteydfkvLdeYeklGyveiipWp
                   qW+ f++++ +++++GA h+++Y++++ e ++++++e  +lG+v+ +pW+
    F36F12.1   180 QWQSFLMQLQVSNKFGA-HLHVYMMTMLENYYQMVRELGQLGIVTTQPWL 228

                   dmkfrsdsiphkypepnsnVelrnqaaAqnDClLrsKeaskwiafaDlDE
                   + kf+++++p+  +ep +n+elrn aaA++DClL++Kea+++i f+ + +
    F36F12.1   229 TPKFSQVARPF--LEPSRNSELRNPAAAFTDCLLQYKEAAQFIGFMEIED 276

                   rLiptngpttlleflsrfikdpnigalqFrkrwvlkvkkspekyendfqL
                    L+p n  t+++ef++++ ++ +i+al++++++ ++vk+s+++++   +L
    F36F12.1   277 LLFPLNTLTYYEEFEREYEGSYQISALYYQVVEQQSVKYSSPENQ---SL 323

                   eeemsflkyhntseigpswhtlvfldqrktgKvIvrPekvnsmwiHsvrk
                     ++++ ++ +t                k+g+ IvrPe++ns+w +++++
    F36F12.1   324 GALLTRAQSGET---------------LKMGRAIVRPERYNSTWAYYSTE 358

                   fpknt.ytkkvg.gykvlevppvvcsegvirHyRnvedkdfe.nwveslv
                   ++k++ y++++++++++l+++++   ++ ++ + n+e++++++n +
    F36F12.1   359 AEKHPvYLAEQDdKPHYLTRKEI--LTNAFLRFSNLEYTSEIdNSTVI-- 404

                   iepkfyfges.eiiseedikeidddlqkmlkspeikklasklPkidyyhp
                     p+++++++++++see+++eid+ l+ +l++p+i+++ ++lP +dyy++
    F36F12.1   405 --PMNPLTTDrQLLSEEQLAEIDQELKETLLMPSIQEFVKQLPTEDYYST 452

                   ivfkcYnekfygslpkqks.ii.cpNacicklpqrenikcstsdacyqsm
                   +   c        l++qk+++ +c+N++ cklp+++ i+c +sd  y+s+
    F36F12.1   453 KLKAC--------LEAQKQgKGqCVNTKACKLPNNDKIPCRHSDGLYHSG 494

                   pnLtpnvyhrvknvydsrdigCyqq<-*
                   +   p+++h+v+  y++r+ gCy
    F36F12.1   495 KVTKPYTFHFVTEYYFTRNLGCY-E    518

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