hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /home/niguts/usr02/tshini/ykclst/db/Pfam_fs
Sequence file:            hmm2/seq/F35G12.6
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Query:  F35G12.6  CE00975  locus:mab-21  status:Partially_confirmed TR:Q20054 protein_id:CAA86330.1

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N
-------- -----------                                    -----    ------- ---
Mab-21   Mab-21 protein                                 861.7   2.4e-255   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
Mab-21     1/1       1   319 []     1   365 []   861.7 2.4e-255

Alignments of top-scoring domains:
Mab-21: domain 1 of 1, from 1 to 319: score 861.7, E = 2.4e-255
                   *->MlaaqqklVYqlNkYfnekvQaRkariaktiqeickvVqdiLKEVEv
                      Ml+++q++VYq+N+YfnekvQ+Rk+r++kt+q+i+kvVq+iLKEVE+
    F35G12.6     1    MLGHNQNVVYQVNNYFNEKVQHRKVRVTKTVQRIAKVVQEILKEVEA 47

                   QEPRFIssLnetntgRFeGleViSPtEfEiVLYLNQMGVfNFVDDGtlpG
                   QEPRFI++L+et+tgRF+G++V+SP+E+E+VLYLNQMGVfNFVDDGt++G
    F35G12.6    48 QEPRFINTLSETTTGRFDGIVVHSPSEYEAVLYLNQMGVFNFVDDGTIQG 97

                   CAVLKLSDGRKRSMSLWVEFitaSgyLsarkiraRFqTLVAQAcDKcaYR
                   CAVLKLSDGRKRSMS    F+++S++L++++++aRF+T
    F35G12.6    98 CAVLKLSDGRKRSMS----FGSSSLLLLDIYQLARFAT------------ 131

                   DvVKMvaDtsevkLrireRyvVQITPAFKCaGiwprSaaHWPlPhlPWPh
                          D+++++L++++               +++S+       lPWP+
    F35G12.6   132 -------DSKILWLKFYK---------------LHNSG-------LPWPN 152

                   pnivaevKaEGFdLlSkEcailqgknsNkqAsSmEgDAWvLkfaeAENrL
                   +++++++KaEGFdL+S+E+ai+q++n+NkqAsSmE+DAW++k+++AEN+L
    F35G12.6   153 AALANQTKAEGFDLTSRETAITQQNNPNKQASSMEADAWAMKMHGAENML 202

                   lqGGcRrkcLSiLKtLRDrHLdlPGnPvtnYhLKtLvlYECEKHpreyeW
                   l+GG Rrk+LSiLK+LRD+H+d+PG+PvtnY+LKtLvlYECEKH++eyeW
    F35G12.6   203 LTGG-RRKTLSILKCLRDAHMDFPGTPVTNYILKTLVLYECEKHCSEYEW 251

                   eescigDRlnGIlLQLiSCLQcRRCpHYFLPnLDLfkgKpvsalEnaAkq
                   e+++igDRl+GIlLQL+SCLQcRRC+HYFLP+LDL+++Kpv+++E++A++
    F35G12.6   252 EDPNIGDRLVGILLQLVSCLQCRRCAHYFLPSLDLLRSKPVHSIEHSAQL 301

                   vWrLtRelLtnpnaLekL<-*
                   +W+L+R+l+++pnaL++L
    F35G12.6   302 AWHLVRKLMIDPNALQSL    319

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