hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /home/niguts/usr02/tshini/ykclst/db/Pfam_fs
Sequence file:            hmm2/seq/F22E12.4b
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Query:  F22E12.4b  CE31342  locus:egl-9  status:Confirmed TN:CAD44157 protein_id:CAD44157.1

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N
-------- -----------                                    -----    ------- ---
zf-MYND  MYND finger                                     72.6    9.6e-23   1
zf-TRAF  TRAF-type zinc finger                            4.7        4.2   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
zf-TRAF    1/1      39    52 ..    51    68 .]     4.7      4.2
zf-MYND    1/1      39    79 ..     1    43 []    72.6  9.6e-23

Alignments of top-scoring domains:
zf-TRAF: domain 1 of 1, from 39 to 52: score 4.7, E = 4.2
                   *->CpFkeyGCkvdmkrenLQ<-*
                      C++    C  +++ ++LQ
   F22E12.4b    39    CTY----CGSSCTSSQLQ    52

zf-MYND: domain 1 of 1, from 39 to 79: score 72.6, E = 9.6e-23
                   *->CanCgkeatksrqLkkCsrCknarYCSkeCQrkdWllgHkreC<-*
                      C++Cg ++t+  qL++C +C +++YCSke+Q++dWl +Hk++C
   F22E12.4b    39    CTYCGSSCTS-SQLQTCLFCGTVAYCSKEHQQLDWL-THKMIC    79

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