hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /home/niguts/usr02/tshini/ykclst/db/Pfam_fs
Sequence file:            hmm1/seq/C32D5.12
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Query:  C32D5.12  CE01841    status:Partially_confirmed TR:Q09491 protein_id:AAC46799.1

Scores for sequence family classification (score includes all domains):
Model     Description                                   Score    E-value  N
--------  -----------                                   -----    ------- ---
3Beta_HSD 3-beta hydroxysteroid dehydrogenase/isomera    51.2    3.6e-13   2
Epimerase NAD dependent epimerase/dehydratase family     17.4    0.00031   1

Parsed for domains:
Model     Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------  ------- ----- -----    ----- -----      -----  -------
Epimerase   1/1       4    71 ..     1    82 [.    17.4  0.00031
3Beta_HSD   1/2       2    73 ..    11   105 ..    43.0  6.4e-11
3Beta_HSD   2/2     174   220 ..   245   291 ..     8.3      0.2

Alignments of top-scoring domains:
Epimerase: domain 1 of 1, from 4 to 71: score 17.4, E = 0.00031
                   *->ILVTGGAGFIGShlvreLlnnygddkVvvLDnLtdyYqyagnearle
                      + VTGGAG +G  +v +Ll+n + +++ ++D  +    ++++e+r
    C32D5.12     4    VAVTGGAGLVGRYVVQRLLENEQIAEIRIIDRQS----TSRDESRK- 45

                   vvegnprytFvkGDIcDrdlldkvfaehqpDaViH<-*
                          +++++ D++Dr  l+ +++    D+ViH
    C32D5.12    46 -------VKLYQIDLNDRKSLENALRGC--DGVIH    71

3Beta_HSD: domain 1 of 2, from 2 to 73: score 43.0, E = 6.4e-11
                   *->ysclVTGGgGFlGrhIVreLlregeslqevRvfDvrfspelledssk
                      y+++VTGG+G +Gr+ V++Ll+ +   +e+R++D+  ++    +s+k
    C32D5.12     2    YTVAVTGGAGLVGRYVVQRLLENEQ-IAEIRIIDRQSTSRD--ESRK 45

                   lqvitSGkikyieGDvtDkqdlaaAlqgiSCCTLLDmTLmDdvvIHtA<-
                   ++          + D++D   l++Al+g             d vIH A
    C32D5.12    46 VKLY--------QIDLNDRKSLENALRGC------------DGVIHCA   73

                   *

    C32D5.12     -   -

3Beta_HSD: domain 2 of 2, from 174 to 220: score 8.3, E = 0.2
                   *->LRPagIfGeGdqflvpflrqlvknGlakfriGdknalsdrVYVgNVA
                      LRP++++G G     +++++l +n    f +G++   + ++Y+gN+A
    C32D5.12   174    LRPTFVYGLGKSKKIDTIKELILNSALPFVTGERRGMHQFIYAGNLA 220

                   <-*

    C32D5.12     -     -

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