hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /home/niguts/usr02/tshini/ykclst/db/Pfam_fs
Sequence file:            hmm1/seq/C25D7.1
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Query:  C25D7.1  CE08387    status:Partially_confirmed TR:Q9U3P3 protein_id:CAB02771.1

Scores for sequence family classification (score includes all domains):
Model      Description                                  Score    E-value  N
--------   -----------                                  -----    ------- ---
MSP_domain MSP (Major sperm protein) domain              88.3    1.3e-24   1

Parsed for domains:
Model      Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------   ------- ----- -----    ----- -----      -----  -------
MSP_domain   1/1      27   134 ..     1   138 []    88.3  1.3e-24

Alignments of top-scoring domains:
MSP_domain: domain 1 of 1, from 27 to 134: score 88.3, E = 1.3e-24
                   *->elklePpvtvtvfpnnlpfdkqggtstltltNpsdkriaFKvKtTnn
                       l ++P+     + +  +     g+s ++++N ++kr+a Kv++ n+
     C25D7.1    27    PLAIDPEEAK-LPNA--G-----GKSEHMVVNFTSKRMAIKVRCGNA 65

                   klYrVrPvyGilePgesvniavtrnvvVtlqrfkglpkpddknkdKfvvq
                    l+rV P++ i+eP+++++++++        r++g+++     kdK +vq
     C25D7.1    66 -LFRVEPTHMIIEPNKCRQLTIN--------RMPGPIQ-----KDKAIVQ 101

                   yleapsedadrqqkraareafkaaaaagvlvgerkipvvfe<-*
                   yl ++ +++d      ++ afkaa +ag  ++  ++++++
     C25D7.1   102 YLQIENDVQD------PKTAFKAADSAG--TKIPHLKIKLV    134

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