hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /home/niguts/usr02/tshini/ykclst/db/Pfam_fs
Sequence file:            hmm1/seq/C04F12.1
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Query:  C04F12.1  CE19674    status:Partially_confirmed TR:Q9XVF1 protein_id:CAB03833.1

Scores for sequence family classification (score includes all domains):
Model          Description                              Score    E-value  N
--------       -----------                              -----    ------- ---
Piwi           Piwi domain                              119.5    6.1e-32   1
gpW            gpW                                        4.1        6.5   1
Osteopontin    Osteopontin                                3.6        1.6   1
Glyco_hydro_76 Glycosyl hydrolase family 76               3.6        5.4   1

Parsed for domains:
Model          Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------       ------- ----- -----    ----- -----      -----  -------
Osteopontin      1/1     206   221 ..   319   334 .]     3.6      1.6
gpW              1/1     762   773 ..     1    12 [.     4.1      6.5
Glyco_hydro_76   1/1     764   789 ..    71    98 ..     3.6      5.4
Piwi             1/1     605   902 ..    24   341 .]   119.5  6.1e-32

Alignments of top-scoring domains:
Osteopontin: domain 1 of 1, from 206 to 221: score 3.6, E = 1.6
                   *->klRiSHELdSaSsEvN<-*
                      k+ +S EL+S  sE N
    C04F12.1   206    KFHVSIELNSKQSELN    221

gpW: domain 1 of 1, from 762 to 773: score 4.1, E = 6.5
                   *->MvrveELaAlRa<-*
                      Mvr eE +A+ +
    C04F12.1   762    MVRNEEFQAIKQ    773

Glyco_hydro_76: domain 1 of 1, from 764 to 789: score 3.6, E = 5.4
                   *->YkdlHVFQAlktallaqaGddfDYmPsn<-*
                      ++++  FQA+k+++  ++++  +++Ps+
    C04F12.1   764    RNEE--FQAIKQSIMNVFNEKKAKAPSF    789

Piwi: domain 1 of 1, from 605 to 902: score 119.5, E = 6.1e-32
                   *->kreltelgipsQcvllktlkkkskqGgrltltNvilkanmKlGGlNy
                      k+++  + +++Q v l++  k++++  + t  N+++k+n+K GG N
    C04F12.1   605    KLQERLCEVITQQVALDKSLKRTPG--KVTANNLLMKLNLKYGGVNH 649

                   klniekeprckVCNemrvip.lkptliiGfDvshppaRTkfDrenggrln
                   k+ ++++  +       ++ ++++tlii +Dv+h++        +    +
    C04F12.1   650 KVRVDNSISH-------LWGdTSNTLIISYDVCHSSGK---VYKKDEICD 689

                   npsvagvvasmdsphgtkfrgdvrlqpagqElltdlkkgiires..Lrsf
                   +ps +g+  +     ++ f+gd+ +q ++ E +++     +r +  L+ +
    C04F12.1   690 EPSCVGFGFNGTA-CPEAFIGDFHYQLPRHEQVDEHLL-KLRARfmLNHY 737

                   ykntrkkkPkrIivYRDGvSEGqfsqvlnyEvnqikeackklsesyqe..
                    ++++ k P+++++ RDGvSEGq+++v n+E ++ik+   ++   ++e++
    C04F12.1   738 ITSRK-KYPQQVVILRDGVSEGQHKMVRNEEFQAIKQ---SIMNVFNEkk 783

                   qe.PkltvIvvqKrHhtRfFasdksdggskakaqNvpPGTvVDdkitspe
                      P+++++vv+KrH  R+  +d+++        NvpP T +D +i+
    C04F12.1   784 AKaPSFALLVVTKRHANRLLIKDQNGY------TNVPPLTAIDQTIVKKQ 827

                   yydFylcsqagrqGTvkPthYtVlyDdigeyylsadelqdLTykLCymyq
                    ++ + +s+ ++ GT+ P   + l++d      + d+l + + +LC ++q
    C04F12.1   828 GNEVIFVSHCPLNGTAQPIVINTLVNDGI--FKTNDQLVQFITALCCAHQ 875

                   rvtrpvslPaPvyYAhllAkrgrnnlk<-*
                    +t  vslP  +y+A+++Akrg+ +
    C04F12.1   876 KSTNIVSLPESIYAADEYAKRGADLFQ    902

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