hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /home/niguts/usr02/tshini/ykclst/db/Pfam_fs
Sequence file:            hmm1/seq/C01F6.8a
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Query:  C01F6.8a  CE17360  locus:icl-1  status:Confirmed TR:Q17564 protein_id:CAA92573.1

Scores for sequence family classification (score includes all domains):
Model        Description                                Score    E-value  N
--------     -----------                                -----    ------- ---
ICln_channel Nucleotide-sensitive chloride conductanc   174.0    2.5e-48   2
EspF         EspF protein                                 4.2        1.9   1
DPPIV_N_term Dipeptidyl peptidase IV (DPP IV) N-termi     1.2        4.3   1

Parsed for domains:
Model        Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------     ------- ----- -----    ----- -----      -----  -------
DPPIV_N_term   1/1      24    52 ..     1    27 [.     1.2      4.3
EspF           1/1      46    65 ..     1    21 [.     4.2      1.9
ICln_channel   1/2      29   107 ..     1    85 []   178.0  1.5e-49
ICln_channel   2/2     124   159 ..    49    85 .]    -4.6  2.3e+03

Alignments of top-scoring domains:
DPPIV_N_term: domain 1 of 1, from 24 to 52: score 1.2, E = 4.3
                   *->vtledifsgtfrpkdyydinWIss...edg<-*
                      + ++ + +gt ++  ++ ++WIss  +++g
    C01F6.8a    24    FKIDSLGNGTLYIT-DSAVIWISSaagTKG    52

EspF: domain 1 of 1, from 46 to 65: score 4.2, E = 1.9
                   *->vssAGlsGFsvaPqAvRLtPv<-*
                       s+AG  GFsva  A+ L  +
    C01F6.8a    46    -SAAGTKGFSVAYPAIVLHAI    65

ICln_channel: domain 1 of 2, from 29 to 107: score 178.0, E = 1.5e-49
                   *->lGpGTLYIaeskLiWlsgsgmakGFsleYPsISLHAiSRDpsAyPsE
                      lG+GTLYI++s++iW+s+++++kGFs++YP+I+LHAiS+D+s++PsE
    C01F6.8a    29    LGNGTLYITDSAVIWISSAAGTKGFSVAYPAIVLHAISTDVSVFPSE 75

                   HlYVmVnaklddlEeeaaeleDdedEEsEsdedlDeep<-*
                   H++VmV++++++lE++aaeleD     +Esd+d +eep
    C01F6.8a    76 HIFVMVDQRKSGLELAAAELED-----EESDDD-EEEP    107

ICln_channel: domain 2 of 2, from 124 to 159: score -4.6, E = 2.3e+03
                   *->lYVmVnaklddlEeeaaeleDdedEEsEsdedlDeep<-*
                      +Y ++ + + +  ee++++ Dde+EE E++   D
    C01F6.8a   124    IYHQIAVGQEENPEEDDPMYDDEEEEMEEEMG-DDGQ    159

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