Motif confirmation by HMMer
hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file: /home/niguts/usr02/tshini/ykclst/db/Pfam_fs
Sequence file: hmm1/seq/B0238.1
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Query: B0238.1 CE07691 carboxylesterase status:Partially_confirmed TR:O16497 protein_id:AAB65983.1
Scores for sequence family classification (score includes all domains):
Model Description Score E-value N
-------- ----------- ----- ------- ---
COesterase Carboxylesterase 642.0 3.3e-189 1
DUF244 Uncharacterized protein family (ORF7) DUF 5.9 0.33 1
Parsed for domains:
Model Domain seq-f seq-t hmm-f hmm-t score E-value
-------- ------- ----- ----- ----- ----- ----- -------
DUF244 1/1 246 264 .. 1 20 [. 5.9 0.33
COesterase 1/1 1 519 [. 1 592 [] 642.0 3.3e-189
Alignments of top-scoring domains:
DUF244: domain 1 of 1, from 246 to 264: score 5.9, E = 0.33
*->mLKGKELEnLGFREFiKAhG<-*
++ K++E L FREF K hG
B0238.1 246 -IRSKDVEGLIFREFAKHHG 264
COesterase: domain 1 of 1, from 1 to 519: score 642.0, E = 3.3e-189
*->mglllllllllllllavvataptspedpvVeTsyvgGkvrGlrvkvd
mg++l++l ++++ + +a++ G++rG+++++d
B0238.1 1 MGGFLSHLKPEHNTEVLNASC---------------GPIRGNIYEHD 32
ggnkpvyaFlGIPYAkPPvGeLRFkkPqPipepWtgvldATkygpaCpQ.
+ k v+ +lGIP+Ak+P+GeLRFkk + +e+Wt++ld++kygp CpQ+
B0238.1 33 D--KIVDGYLGIPFAKAPIGELRFKKSVE-AEKWTEPLDCYKYGPGCPQs 79
ndlgfpgfpLAlevmgsemwnkntgvsmSEDCLYLNVytPklasenk..k
+ lg +m ++ ++++ + +CL+LNV++Pk++s +++++
B0238.1 80 GALG---------AMIVPQASAIRE-FAEDNCLTLNVFAPKWKSAEFpnG 119
lPVmVwIHGGGFqsGsassfslddydgpdlaaekdVVVVtiNYRLGalGF
lPV+V+++GGGF++G +s ++ddy+ ++++ kdV++Vt+NYR G+lGF
B0238.1 120 LPVIVYFYGGGFEVGFSS--MFDDYSLTGTLPLKDVILVTPNYRIGPLGF 167
LstgdselpvppGNaGLlDQvlALrWVqeNIaaFGGDPdnVTlFGeSAGA
++tgd++ + GN+GL+DQ lAL+WVq++I++FGGDP+nVT+ G SAG+
B0238.1 168 FATGDDVSR---GNWGLWDQALALQWVQKHIKSFGGDPSNVTISGTSAGG 214
aSVsllllSppqsrgLFhrAIlqSGsalspwaits.pearnrakrlAkll
aSV++l+lS p++ +Fh+ I++SG+a++p+ i+s+++ +++++Ak+
B0238.1 215 ASVDFLSLS-PHANKYFHKFIPMSGAATCPFGIRSkDVEGLIFREFAKHH 263
GCpgedstelleCLRkksaeelldaqeklllldevgffpffaFgPvvdGd
G+ g+ds+ ll+++++++ae +l+a+ + ++ +g+f+ F+P++dGd
B0238.1 264 GYAGNDSESLLHWYQSQDAEIFLKAEG--FKYPASGMFS---FVPNYDGD 308
tpdaflpkdPeellkegnfnkvPlliGvtsdEGllflayll.dp.esadl
f+pk+ +el+ke ++k + +++v ++EGl f ++++++++
B0238.1 309 ----FFPKPFDELRKE--APKLDAIVSVAEYEGLGFEEFYPgQKsP---- 348
lslldnedlflellpellpgaselltpklreeiadalkeeYtdd.ddnse
+e+l + l + + +ree++++ +e Y+++ +d s
B0238.1 349 ----------QEVLTAALG-PEVVR---NREEVVKKAVEAYLENiEDKSG 384
esr.ealvdllsDylFvcpilrlaaarlakggapvYlYrFdyrssfsfnq
e ++++lv++++Dy+F ++ +++lak g++vYl +F+y ++ +
B0238.1 385 EKIgKKLVEIFGDYYFSVG-VFDTVRSLAKYGNNVYLSSFNYFNPE---T 430
ylinllwppwmgvsHgdelsYvFGnpls.klyteeeeklssrrmmrywtn
++ p+ ++sHg ++ Y++G ++ ++ + e++k ++++m +y+tn
B0238.1 431 PIMFGENRPFNAASHGCDIRYILGDGIGeFSK--EDRK-VMDMMGTYLTN 477
FAktGnPNngessglpkWppytseeqkYyllntlltistk.lreedprkv
FAk+GnP ++ +++ W++y+ + ++ ++++i++++++++d
B0238.1 478 FAKYGNP--NGKGVSIPWEKYSLD-----NPGRYFKIDYPkCEMAD---- 516
kcafw<-*
+f
B0238.1 517 --NFL 519