Homology by BLASTX
BLASTX 2.2.4 [Aug-26-2002]
Query= ZK418_6
(840 letters)
Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
1,967,186 sequences; 661,712,633 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|17556937|ref|NP_498547.1| KH domain-containing transcription ... 556 e-157
gi|39593968|emb|CAE70078.1| Hypothetical protein CBG16519 [Caeno... 368 e-100
gi|19075606|ref|NP_588106.1| hypothetical KH domain RNA-binding ... 47 4e-04
gi|50752150|ref|XP_422677.1| PREDICTED: similar to IGF-II mRNA-b... 47 4e-04
gi|2801766|gb|AAB97457.1| KH domain-containing transcription fac... 46 9e-04
gi|50732686|ref|XP_418716.1| PREDICTED: similar to KH domain-con... 46 0.001
gi|47210842|emb|CAF89578.1| unnamed protein product [Tetraodon n... 45 0.003
gi|45384194|ref|NP_990402.1| zipcode-binding protein [Gallus gal... 44 0.003
gi|34855856|ref|XP_231739.2| similar to igf2 mRNA-binding protei... 44 0.006
gi|30795212|ref|NP_006538.2| IGF-II mRNA-binding protein 3; KH d... 44 0.006
gi|2105469|gb|AAC35208.1| putative RNA binding protein KOC [Homo... 44 0.006
gi|4191608|gb|AAD09826.1| IGF-II mRNA-binding protein 1 [Homo sa... 44 0.006
gi|6753518|ref|NP_034081.1| insulin-like growth factor 2, bindin... 44 0.006
gi|28212254|ref|NP_783184.1| IGF-II mRNA-binding protein 1; zipc... 44 0.006
gi|3136158|gb|AAC41285.1| RNA binding protein Vera [Xenopus laev... 44 0.006
gi|30354044|gb|AAH51679.1| Insulin-like growth factor 2, binding... 44 0.006
gi|26336871|dbj|BAC32119.1| unnamed protein product [Mus musculus] 44 0.006
gi|21361352|ref|NP_006537.2| IGF-II mRNA-binding protein 1 [Homo... 44 0.006
gi|31542992|ref|NP_076159.2| insulin-like growth factor 2, bindi... 43 0.007
gi|11933384|dbj|BAB19755.1| igf2 mRNA-binding protein 3 [Mus mus... 43 0.007
gi|45198501|ref|NP_985530.1| AFL018Cp [Eremothecium gossypii] >g... 43 0.007
gi|49081020|ref|XP_403963.1| hypothetical protein UM06348.1 [Ust... 43 0.010
gi|4883681|gb|AAD31596.1| hepatocellular carcinoma autoantigen [... 42 0.013
gi|27552766|ref|NP_006539.2| IGF-II mRNA-binding protein 2 [Homo... 42 0.013
gi|33942112|ref|NP_898850.1| IGF-II mRNA-binding protein 2 [Mus ... 42 0.013
gi|32405206|ref|XP_323216.1| related to SCP160 protein [MIPS] [N... 42 0.017
gi|50306403|ref|XP_453175.1| unnamed protein product [Kluyveromy... 41 0.028
gi|49256273|gb|AAH74333.1| Unknown (protein for MGC:84166) [Xeno... 41 0.037
gi|18858571|ref|NP_571566.1| decapentaplegic and Vg-related 1, R... 41 0.037
gi|50255668|gb|EAL18401.1| hypothetical protein CNBJ3240 [Crypto... 41 0.037
gi|40792684|gb|AAR90343.1| circadian RNA-binding protein CHLAMY ... 41 0.037
gi|33604078|gb|AAH56323.1| Zgc:65870 protein [Danio rerio] >gnl|... 41 0.037
gi|34869314|ref|XP_221343.2| similar to IGF-II mRNA-binding prot... 41 0.037
gi|26330216|dbj|BAC28838.1| unnamed protein product [Mus musculus] 40 0.063
gi|21753335|dbj|BAC04327.1| unnamed protein product [Homo sapiens] 40 0.063
gi|26348076|dbj|BAC37686.1| unnamed protein product [Mus musculus] 40 0.063
gi|27503479|gb|AAH42440.1| Pcbp3 protein [Mus musculus] 40 0.063
gi|10092617|ref|NP_065389.1| poly(rC) binding protein 3; poly (r... 40 0.063
gi|46577695|sp|P57722|PCB3_MOUSE Poly(rC)-binding protein 3 (Alp... 40 0.063
gi|41055221|ref|NP_957486.1| poly(rC) binding protein 2; wu:fb36... 40 0.083
gi|15082311|gb|AAH12061.1| PCBP3 protein [Homo sapiens] 40 0.083
gi|47214279|emb|CAG01336.1| unnamed protein product [Tetraodon n... 39 0.11
gi|31209325|ref|XP_313629.1| ENSANGP00000012671 [Anopheles gambi... 39 0.11
gi|50736109|ref|XP_419049.1| PREDICTED: similar to Poly(rC)-bind... 39 0.11
gi|31209327|ref|XP_313630.1| ENSANGP00000024619 [Anopheles gambi... 39 0.11
gi|49899939|gb|AAH76949.1| Unknown (protein for MGC:89329) [Xeno... 39 0.11
gi|50750145|ref|XP_421889.1| PREDICTED: similar to Poly(rC)-bind... 39 0.11
gi|10947014|ref|NP_067543.1| poly(rC) binding protein 3; poly(rC... 39 0.11
gi|27882206|gb|AAH44314.1| Hdlbp-prov protein [Xenopus laevis] 39 0.14
gi|6319709|ref|NP_009792.1| RNA binding protein with similarity ... 39 0.14
gi|46135951|ref|XP_389667.1| hypothetical protein FG09491.1 [Gib... 39 0.14
gi|47718038|gb|AAH70981.1| Unknown (protein for MGC:78835) [Xeno... 39 0.18
gi|25992563|gb|AAN77161.1| FUSE binding protein-like protein [Xe... 39 0.18
gi|47222225|emb|CAG11104.1| unnamed protein product [Tetraodon n... 39 0.18
gi|14670369|ref|NP_127501.1| poly(rC) binding protein 4 isoform ... 39 0.18
gi|38014650|gb|AAH60400.1| MGC68532 protein [Xenopus laevis] 38 0.24
gi|49079848|ref|XP_403524.1| hypothetical protein UM05909.1 [Ust... 38 0.24
gi|45384156|ref|NP_990427.1| vigilin [Gallus gallus] >gnl|BL_ORD... 38 0.24
gi|6707736|sp|Q15366|PCB2_HUMAN Poly(rC)-binding protein 2 (Alph... 38 0.24
gi|34865871|ref|XP_343469.1| similar to poly(rC) binding protein... 38 0.24
gi|41393109|ref|NP_958882.1| high density lipoprotein-binding pr... 38 0.24
gi|14141168|ref|NP_005007.2| poly(rC)-binding protein 2 isoform ... 38 0.24
gi|34853556|ref|XP_342410.1| similar to FUSE binding protein 3 [... 38 0.31
gi|14043859|gb|AAH07874.1| FUBP3 protein [Homo sapiens] 38 0.31
gi|38074611|ref|XP_130112.3| RIKEN cDNA A330051M14 gene [Mus mus... 38 0.31
gi|47208134|emb|CAF91968.1| unnamed protein product [Tetraodon n... 38 0.31
gi|47085903|ref|NP_998309.1| zgc:66046 [Danio rerio] >gnl|BL_ORD... 38 0.31
gi|1575609|gb|AAC50893.1| FUSE binding protein 3 [Homo sapiens] 38 0.31
gi|42659055|ref|XP_376917.1| far upstream element (FUSE) binding... 38 0.31
gi|4972720|gb|AAD34755.1| unknown [Drosophila melanogaster] 37 0.41
gi|34364924|emb|CAE45883.1| hypothetical protein [Homo sapiens] 37 0.41
gi|28317389|tpe|CAD29864.1| TPA: hnRNP-E2 b [Xenopus laevis] 37 0.41
gi|5459450|emb|CAB50743.1| hnRNP-E2 protein [Xenopus laevis] 37 0.41
gi|27370875|gb|AAH41241.1| Pcbp2-prov protein [Xenopus laevis] 37 0.41
gi|49250542|gb|AAH74565.1| Unknown (protein for MGC:69512) [Xeno... 37 0.41
gi|47223565|emb|CAF99174.1| unnamed protein product [Tetraodon n... 37 0.41
gi|17384400|emb|CAD13196.1| hnRNP-E2 protein copy b [Xenopus lae... 37 0.41
gi|5734514|emb|CAB52798.1| drosophila dodeca-satellite protein 1... 37 0.41
gi|24655003|ref|NP_523781.2| CG5170-PC [Drosophila melanogaster]... 37 0.41
gi|8699624|gb|AAF78762.1| bancal protein [Drosophila melanogaster] 37 0.54
gi|45361433|ref|NP_989293.1| hypothetical protein MGC75632 [Xeno... 37 0.54
gi|47213916|emb|CAF90739.1| unnamed protein product [Tetraodon n... 37 0.54
gi|45552763|ref|NP_995906.1| CG13425-PC [Drosophila melanogaster... 37 0.54
gi|6687391|emb|CAB64936.1| heterogeneous nuclear ribonucleoprote... 37 0.54
gi|45552765|ref|NP_995907.1| CG13425-PA [Drosophila melanogaster... 37 0.54
gi|17862704|gb|AAL39829.1| LD45549p [Drosophila melanogaster] 37 0.54
gi|50757315|ref|XP_415466.1| PREDICTED: similar to MGC68532 prot... 37 0.54
gi|25012664|gb|AAN71427.1| RE50346p [Drosophila melanogaster] 37 0.54
gi|45552761|ref|NP_995905.1| CG13425-PD [Drosophila melanogaster... 37 0.54
gi|24656342|ref|NP_665890.2| CG13425-PB [Drosophila melanogaster... 37 0.54
gi|6006748|gb|AAF00596.1| hnRNP K protein homolog [Drosophila me... 37 0.54
gi|26325406|dbj|BAC26457.1| unnamed protein product [Mus musculus] 37 0.70
gi|16878077|gb|AAH17247.1| FUBP1 protein [Homo sapiens] 37 0.70
gi|28278093|gb|AAH44277.1| Fubp1-prov protein [Xenopus laevis] 37 0.70
gi|12230430|sp|P57724|PCB4_MOUSE Poly(rC)-binding protein 4 (Alp... 37 0.70
gi|31981202|ref|NP_067542.2| poly(rC) binding protein 4; poly(rC... 37 0.70
gi|14715061|gb|AAH10694.1| Poly(rC) binding protein 4 [Mus muscu... 37 0.70
gi|12837891|dbj|BAB23990.1| unnamed protein product [Mus musculus] 37 0.70
gi|49088848|ref|XP_406205.1| hypothetical protein AN2068.2 [Aspe... 37 0.70
gi|50751416|ref|XP_422387.1| PREDICTED: similar to Far upstream ... 37 0.70
gi|37078490|sp|Q96AE4|FUB1_HUMAN Far upstream element binding pr... 37 0.70
gi|5453854|ref|NP_006187.1| poly(rC) binding protein 1; heteroge... 36 0.91
gi|14670371|ref|NP_127502.1| poly(rC) binding protein 4 isoform ... 36 0.91
gi|19424312|ref|NP_598286.1| MAP2 RNA trans-acting protein MARTA... 36 0.91
gi|6754994|ref|NP_035995.1| poly(rC) binding protein 1; poly(rC)... 36 0.91
gi|25992561|gb|AAN77160.1| RNA-binding protein VgRBP71 [Xenopus ... 36 0.91
gi|14141166|ref|NP_114366.1| poly(rC)-binding protein 2 isoform ... 36 0.91
gi|15639871|ref|NP_219321.1| polyribonucleotide nucleotidyltrans... 36 0.91
gi|50794550|ref|XP_423701.1| PREDICTED: similar to nuclear poly(... 36 0.91
gi|38082738|ref|XP_128746.4| KH-type splicing regulatory protein... 36 0.91
gi|444021|emb|CAA82631.1| sub2.3 [Homo sapiens] 36 0.91
gi|6997239|ref|NP_035172.1| poly(rC) binding protein 2; heteroge... 36 0.91
gi|38110867|gb|EAA56525.1| hypothetical protein MG06496.4 [Magna... 36 0.91
gi|495128|emb|CAA53546.1| mCBP [Mus musculus] 36 0.91
gi|1575607|gb|AAC50892.1| FUSE binding protein 2 [Homo sapiens] 36 1.2
gi|11499533|ref|NP_070775.1| conserved hypothetical protein [Arc... 36 1.2
gi|37078468|sp|Q92945|FUB2_HUMAN Far upstream element binding pr... 36 1.2
gi|17402900|ref|NP_003893.2| far upstream element-binding protei... 36 1.2
gi|1082624|pir||A53184 myc far upstream element-binding protein ... 36 1.2
gi|50418599|ref|XP_457818.1| unnamed protein product [Debaryomyc... 36 1.2
gi|46309399|ref|YP_006289.1| ORF55 [Agrotis segetum granulovirus... 36 1.2
gi|40225729|gb|AAH10083.1| FUBP1 protein [Homo sapiens] 36 1.2
gi|4504865|ref|NP_003676.1| KH-type splicing regulatory protein ... 36 1.2
gi|19682984|gb|AAL92609.1| similar to Mus musculus (Mouse). 8430... 36 1.2
gi|16975504|ref|NP_476513.1| DNA segment, Chr 3, ERATO Doi 330, ... 36 1.2
gi|39593301|emb|CAE64771.1| Hypothetical protein CBG09562 [Caeno... 36 1.2
gi|33150676|gb|AAP97216.1| CBP [Homo sapiens] 35 1.6
gi|31212109|ref|XP_315039.1| ENSANGP00000002408 [Anopheles gambi... 35 1.6
gi|25144314|ref|NP_740869.1| putative RNA binding protein with K... 35 1.6
gi|32564299|ref|NP_497351.2| patterned Expression Site PES-4, po... 35 1.6
gi|45383580|ref|NP_989608.1| KH-type splicing regulatory protein... 35 1.6
gi|32564028|ref|NP_491825.2| putative RNA binding protein with K... 35 1.6
gi|29841392|gb|AAP06424.1| similar to GenBank Accession Number S... 35 1.6
gi|39588859|emb|CAE69489.1| Hypothetical protein CBG15694 [Caeno... 35 1.6
gi|48117763|ref|XP_393198.1| similar to ENSANGP00000002408 [Apis... 35 1.6
gi|9558483|dbj|BAB03404.1| PEM-3 [Ciona savignyi] 35 1.6
gi|39595660|emb|CAE67162.1| Hypothetical protein CBG12588 [Caeno... 35 1.6
gi|31213055|ref|XP_315471.1| ENSANGP00000021202 [Anopheles gambi... 35 1.6
gi|46106240|ref|ZP_00186834.2| COG1185: Polyribonucleotide nucle... 35 1.6
gi|47212720|emb|CAF90458.1| unnamed protein product [Tetraodon n... 35 2.0
gi|47209955|emb|CAF90944.1| unnamed protein product [Tetraodon n... 35 2.0
gi|34857654|ref|XP_218846.2| similar to KIAA2009 protein [Rattus... 35 2.7
gi|31240027|ref|XP_320427.1| ENSANGP00000016890 [Anopheles gambi... 35 2.7
gi|15227534|ref|NP_178410.1| KH domain-containing protein [Arabi... 35 2.7
gi|50311087|ref|XP_455567.1| unnamed protein product [Kluyveromy... 35 2.7
gi|14286189|gb|AAF73434.2| reverse transcriptase [Candida albicans] 35 2.7
gi|46431502|gb|EAK91055.1| hypothetical protein CaO19.559 [Candi... 35 2.7
gi|50760981|ref|XP_418202.1| PREDICTED: similar to methyl-CpG bi... 35 2.7
gi|24638693|ref|NP_651934.1| CG11360-PA [Drosophila melanogaster... 35 2.7
gi|25282449|ref|NP_742036.1| lipoprotein-binding protein [Rattus... 35 2.7
gi|47226335|emb|CAG09303.1| unnamed protein product [Tetraodon n... 35 2.7
gi|24899182|dbj|BAC23105.1| KIAA2009 protein [Homo sapiens] 35 2.7
gi|19527028|ref|NP_598569.1| high density lipoprotein binding pr... 35 2.7
gi|50511245|dbj|BAD32608.1| mKIAA2009 protein [Mus musculus] 35 2.7
gi|23509372|ref|NP_702039.1| hypothetical protein [Plasmodium fa... 35 2.7
gi|39591609|emb|CAE71186.1| Hypothetical protein CBG18043 [Caeno... 35 2.7
gi|29740288|ref|XP_290645.1| hypothetical protein DKFZp434J0617 ... 35 2.7
gi|19570058|gb|AAL92350.1| similar to Emericella nidulans (Asper... 35 2.7
gi|47216238|emb|CAG05934.1| unnamed protein product [Tetraodon n... 35 2.7
gi|38101960|gb|EAA48856.1| hypothetical protein MG00514.4 [Magna... 35 2.7
gi|50557074|ref|XP_505945.1| hypothetical protein [Yarrowia lipo... 34 3.5
gi|22759735|dbj|BAC10968.1| PEM-3 [Halocynthia roretzi] 34 3.5
gi|34534918|dbj|BAC87153.1| unnamed protein product [Homo sapiens] 34 3.5
gi|17557820|ref|NP_505632.1| putative RNA binding protein with K... 34 3.5
gi|39589208|emb|CAE57941.1| Hypothetical protein CBG00996 [Caeno... 34 3.5
gi|17557818|ref|NP_505633.1| putative RNA binding protein with K... 34 3.5
gi|40225995|gb|AAH14305.2| HDLBP protein [Homo sapiens] 34 3.5
gi|4885409|ref|NP_005327.1| high density lipoprotein binding pro... 34 3.5
gi|20150334|pdb|1J4W|A Chain A, Complex Of The Kh3 And Kh4 Domai... 34 3.5
gi|32422371|ref|XP_331629.1| hypothetical protein [Neurospora cr... 34 3.5
gi|19075184|ref|NP_587684.1| RNA-binding protein; contains KH do... 34 3.5
gi|15217969|ref|NP_175569.1| KH domain-containing protein [Arabi... 34 3.5
gi|47077211|dbj|BAD18526.1| unnamed protein product [Homo sapiens] 34 3.5
gi|39585867|emb|CAE61281.1| Hypothetical protein CBG05100 [Caeno... 34 3.5
gi|7504090|pir||T29029 hypothetical protein F53G12.5 - Caenorhab... 34 3.5
gi|42631369|ref|ZP_00156907.1| COG0528: Uridylate kinase [Haemop... 34 4.5
gi|16272996|ref|NP_439223.1| uridylate kinase [Haemophilus influ... 34 4.5
gi|38085997|ref|XP_357713.1| similar to RNA-binding protein Nova... 34 4.5
gi|49074254|ref|XP_401274.1| hypothetical protein UM03659.1 [Ust... 33 5.9
gi|37535668|ref|NP_922136.1| putative RNA-binding protein [Oryza... 33 5.9
gi|10346129|ref|NP_061135.1| DEAD (Asp-Glu-Ala-Asp) box polypept... 33 5.9
gi|45219880|gb|AAH66938.1| DEAD (Asp-Glu-Ala-Asp) box polypeptid... 33 5.9
gi|15612201|ref|NP_223854.1| POLYRIBONUCLEOTIDE NUCLEOTIDYLTRANS... 33 5.9
gi|48097752|ref|XP_393878.1| similar to ENSANGP00000016890 [Apis... 33 7.7
gi|34881395|ref|XP_229088.2| similar to Vigilin (High density li... 33 7.7
gi|50547755|ref|XP_501347.1| hypothetical protein [Yarrowia lipo... 33 7.7
gi|47228349|emb|CAG07744.1| unnamed protein product [Tetraodon n... 33 7.7
gi|17507551|ref|NP_490681.1| KH domain protein, embryonic cell f... 33 7.7
gi|1644450|gb|AAC47313.1| MEX-3 [Caenorhabditis elegans] 33 7.7
gi|25511683|pir||C86460 F14M2.18 protein - Arabidopsis thaliana ... 33 7.7
gi|39545577|ref|NP_057710.2| ring finger and KH domain containin... 33 7.7
gi|38084060|ref|XP_140436.5| similar to KIAA2031 protein [Mus mu... 33 7.7
gi|34932367|ref|XP_225735.2| similar to KIAA2031 protein [Rattus... 33 7.7
gi|15645827|ref|NP_208005.1| polynucleotide phosphorylase (pnp) ... 33 7.7
>gi|17556937|ref|NP_498547.1| KH domain-containing transcription
factor B3 like (3I174) [Caenorhabditis elegans]
gi|7511140|pir||T27854 hypothetical protein ZK418.8 -
Caenorhabditis elegans
gi|470376|gb|AAA50692.1| Hypothetical protein ZK418.8
[Caenorhabditis elegans]
Length = 279
Score = 556 bits (1434), Expect = e-157
Identities = 279/279 (100%), Positives = 279/279 (100%)
Frame = -1
Query: 840 MGKLTNCLLAAMIASPFVIKYLRYRRLSAFVRLKPQLDDTDSENEADGILADASKDYFIR 661
MGKLTNCLLAAMIASPFVIKYLRYRRLSAFVRLKPQLDDTDSENEADGILADASKDYFIR
Sbjct: 1 MGKLTNCLLAAMIASPFVIKYLRYRRLSAFVRLKPQLDDTDSENEADGILADASKDYFIR 60
Query: 660 IPAFAVGAVVGKRGMTLRRLMYETQTECVLRSYTPEELDVASNEVSADAEWTEQFQNEDW 481
IPAFAVGAVVGKRGMTLRRLMYETQTECVLRSYTPEELDVASNEVSADAEWTEQFQNEDW
Sbjct: 61 IPAFAVGAVVGKRGMTLRRLMYETQTECVLRSYTPEELDVASNEVSADAEWTEQFQNEDW 120
Query: 480 FGEESTDTRRKITYLLVRATDEQCVKLVRLRIAEIIDNVQKPWKTAEFEVETQMVGYLVG 301
FGEESTDTRRKITYLLVRATDEQCVKLVRLRIAEIIDNVQKPWKTAEFEVETQMVGYLVG
Sbjct: 121 FGEESTDTRRKITYLLVRATDEQCVKLVRLRIAEIIDNVQKPWKTAEFEVETQMVGYLVG 180
Query: 300 RGGRHIKTLRDKFSVNIQISDPIPDDPTRSLVTVRGRDLTALKEVEVVMKETVLPRNYNC 121
RGGRHIKTLRDKFSVNIQISDPIPDDPTRSLVTVRGRDLTALKEVEVVMKETVLPRNYNC
Sbjct: 181 RGGRHIKTLRDKFSVNIQISDPIPDDPTRSLVTVRGRDLTALKEVEVVMKETVLPRNYNC 240
Query: 120 ARNRNYDEDTFLDNGIYDDVDEEIKDLKKVTELLAQDFF 4
ARNRNYDEDTFLDNGIYDDVDEEIKDLKKVTELLAQDFF
Sbjct: 241 ARNRNYDEDTFLDNGIYDDVDEEIKDLKKVTELLAQDFF 279