Homology by BLASTX
BLASTX 2.2.4 [Aug-26-2002]
Query= ZC308_4
(2616 letters)
Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
1,967,186 sequences; 661,712,633 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|7510679|pir||T32275 hypothetical protein ZC308.1 - Caenorhabd... 1290 0.0
gi|27714040|gb|AAO21479.1| Defective in germ line development pr... 1015 0.0
gi|32563609|ref|NP_491842.2| regulatory cytoplasmic polyA polyme... 1015 0.0
gi|32562829|ref|NP_491841.2| defective in germ line development ... 1015 0.0
gi|39595675|emb|CAE67177.1| Hypothetical protein CBG12609 [Caeno... 975 0.0
gi|31243171|ref|XP_322031.1| ENSANGP00000012042 [Anopheles gambi... 191 6e-47
gi|49903424|gb|AAH76832.1| Unknown (protein for MGC:83852) [Xeno... 191 8e-47
gi|45550788|ref|NP_651012.2| CG5732-PA [Drosophila melanogaster]... 190 1e-46
gi|34853040|ref|XP_342174.1| similar to RIKEN cDNA 8030446C20 [R... 187 8e-46
gi|28839666|gb|AAH47581.1| PAPD4 protein [Homo sapiens] 184 1e-44
gi|38081927|ref|XP_124512.2| similar to RIKEN cDNA 8030446C20 [M... 183 2e-44
gi|19527122|ref|NP_598666.1| PAP associated domain containing 4 ... 182 3e-44
gi|27883868|ref|NP_776158.1| PAP associated domain containing 4 ... 178 5e-43
gi|45708664|gb|AAH26061.1| PAPD4 protein [Homo sapiens] 178 5e-43
gi|26328863|dbj|BAC28170.1| unnamed protein product [Mus musculus] 160 2e-37
gi|31210483|ref|XP_314208.1| ENSANGP00000014419 [Anopheles gambi... 159 2e-37
gi|24641449|ref|NP_572766.1| CG15737-PA [Drosophila melanogaster... 157 9e-37
gi|17507031|ref|NP_493623.1| PAP/25A-associated domain containin... 156 2e-36
gi|38422295|emb|CAE54892.1| Hypothetical protein F31C3.2b [Caeno... 156 2e-36
gi|39584413|emb|CAE72551.1| Hypothetical protein CBG19735 [Caeno... 153 2e-35
gi|31237113|ref|XP_319544.1| ENSANGP00000017841 [Anopheles gambi... 134 9e-30
gi|47226704|emb|CAG07863.1| unnamed protein product [Tetraodon n... 117 1e-24
gi|41052754|dbj|BAD07610.1| putative caffeine-induced death prot... 115 4e-24
gi|18406841|ref|NP_566048.1| nucleotidyltransferase family prote... 110 2e-22
gi|38100945|gb|EAA47994.1| hypothetical protein MG09124.4 [Magna... 106 3e-21
gi|46105240|ref|XP_380424.1| hypothetical protein FG00248.1 [Gib... 102 4e-20
gi|49112537|ref|XP_411885.1| hypothetical protein AN7748.2 [Aspe... 102 5e-20
gi|19112002|ref|NP_595210.1| conserved hypothetical protein [Sch... 99 4e-19
gi|47226593|emb|CAG08609.1| unnamed protein product [Tetraodon n... 98 1e-18
gi|49077568|ref|XP_402628.1| hypothetical protein UM05013.1 [Ust... 97 2e-18
gi|16550803|dbj|BAB71052.1| unnamed protein product [Homo sapiens] 96 3e-18
gi|12697967|dbj|BAB21802.1| KIAA1711 protein [Homo sapiens] 96 3e-18
gi|46403037|gb|AAS92532.1| CID1 [Cryptococcus bacillisporus] 95 7e-18
gi|50258672|gb|EAL21357.1| hypothetical protein CNBD0540 [Crypto... 95 7e-18
gi|47059476|ref|NP_705766.2| zinc finger, CCHC domain containing... 95 1e-17
gi|23272242|gb|AAH23880.1| Zcchc6 protein [Mus musculus] 95 1e-17
gi|50762378|ref|XP_425036.1| PREDICTED: similar to the gene is e... 94 2e-17
gi|48132931|ref|XP_393329.1| similar to ENSANGP00000012042 [Apis... 94 2e-17
gi|39583240|emb|CAE60032.1| Hypothetical protein CBG03540 [Caeno... 93 4e-17
gi|19115813|ref|NP_594901.1| nucleotidyltransferase required for... 92 5e-17
gi|17554126|ref|NP_498100.1| the gene is expressed protein retai... 92 6e-17
gi|25395735|pir||D88451 protein K10D2.2 [imported] - Caenorhabdi... 92 6e-17
gi|19114069|ref|NP_593157.1| hypothetical protein [Schizosacchar... 91 2e-16
gi|41107445|ref|XP_038288.9| KIAA0191 protein [Homo sapiens] 87 2e-15
gi|1228035|dbj|BAA12105.1| The KIAA0191 gene is expressed ubiqui... 87 2e-15
gi|25573216|gb|AAN75184.1| CID1 [Cryptococcus neoformans var. gr... 87 3e-15
gi|25573185|gb|AAN75161.1| CID1 [Cryptococcus neoformans var. gr... 87 3e-15
gi|25777814|gb|AAN75620.1| CID1 [Cryptococcus neoformans var. ne... 87 3e-15
gi|25956316|gb|AAN75730.1| CID1 [Cryptococcus neoformans var. ne... 87 3e-15
gi|7485629|pir||T00875 hypothetical protein At2g45620 [imported]... 85 8e-15
gi|23479890|gb|EAA16601.1| hypothetical protein [Plasmodium yoel... 85 1e-14
gi|23509011|ref|NP_701679.1| hypothetical protein [Plasmodium fa... 84 1e-14
gi|17507815|ref|NP_491621.1| the gene is expressed protein retai... 84 2e-14
gi|42659026|ref|XP_372124.2| zinc finger, CCHC domain containing... 84 2e-14
gi|46116842|ref|XP_384439.1| hypothetical protein FG04263.1 [Gib... 83 3e-14
gi|29246242|gb|EAA37846.1| GLP_74_2638_4671 [Giardia lamblia ATC... 83 4e-14
gi|39595578|emb|CAE67079.1| Hypothetical protein CBG12488 [Caeno... 82 5e-14
gi|32406208|ref|XP_323717.1| hypothetical protein [Neurospora cr... 82 7e-14
gi|17554128|ref|NP_498099.1| the gene is expressed protein retai... 80 3e-13
gi|23507956|ref|NP_700626.1| hypothetical protein [Plasmodium fa... 79 4e-13
gi|32564963|ref|NP_871880.1| DNA polymerase, beta-like region an... 78 1e-12
gi|17508045|ref|NP_491834.1| DNA polymerase, beta-like region an... 78 1e-12
gi|17560916|ref|NP_505067.1| putative protein family member, wit... 77 2e-12
gi|39590416|emb|CAE66155.1| Hypothetical protein CBG11386 [Caeno... 76 4e-12
gi|34908258|ref|NP_915476.1| P0446B05.18 [Oryza sativa (japonica... 76 5e-12
gi|15225547|ref|NP_181504.1| expressed protein [Arabidopsis thal... 76 5e-12
gi|39595665|emb|CAE67167.1| Hypothetical protein CBG12597 [Caeno... 75 6e-12
gi|34876220|ref|XP_225468.2| similar to RIKEN cDNA 0610027A18 [R... 75 8e-12
gi|21312970|ref|NP_080433.1| PAP associated domain containing 1 ... 75 1e-11
gi|26345490|dbj|BAC36396.1| unnamed protein product [Mus musculus] 75 1e-11
gi|50761565|ref|XP_424767.1| PREDICTED: similar to PAPD4 protein... 74 2e-11
gi|7022551|dbj|BAA91641.1| unnamed protein product [Homo sapiens] 72 7e-11
gi|21361704|ref|NP_060579.2| PAP associated domain containing 1 ... 72 7e-11
gi|50732321|ref|XP_418580.1| PREDICTED: similar to PAP associate... 72 9e-11
gi|38197606|gb|AAH61703.1| PAP associated domain containing 1 [H... 71 1e-10
gi|47225120|emb|CAF98747.1| unnamed protein product [Tetraodon n... 71 2e-10
gi|50751606|ref|XP_422475.1| PREDICTED: similar to The KIAA0191 ... 68 1e-09
gi|23479769|gb|EAA16506.1| caffeine-induced death protein 1 [Pla... 67 3e-09
gi|47226027|emb|CAG04401.1| unnamed protein product [Tetraodon n... 67 3e-09
gi|19114483|ref|NP_593571.1| hypothetical protein [Schizosacchar... 65 1e-08
gi|39594513|emb|CAE72091.1| Hypothetical protein CBG19180 [Caeno... 64 2e-08
gi|31236975|ref|XP_319519.1| ENSANGP00000017807 [Anopheles gambi... 64 2e-08
gi|20128857|ref|NP_569904.1| CG11418-PA [Drosophila melanogaster... 63 3e-08
gi|21430928|gb|AAM51142.1| SD27341p [Drosophila melanogaster] 63 3e-08
gi|32408473|ref|XP_324718.1| hypothetical protein [Neurospora cr... 63 3e-08
gi|32565538|ref|NP_495546.2| putative protein family member of e... 60 3e-07
gi|7503310|pir||T34046 hypothetical protein F43E2.1 - Caenorhabd... 60 3e-07
gi|31218656|ref|XP_316693.1| ENSANGP00000020984 [Anopheles gambi... 60 3e-07
gi|50405595|ref|XP_456434.1| unnamed protein product [Debaryomyc... 59 5e-07
gi|19113797|ref|NP_592885.1| putative topoisomerase 1-related pr... 58 1e-06
gi|2130260|pir||S62544 hypothetical protein SPAC12G12.13c - fiss... 58 1e-06
gi|37574078|ref|NP_932110.1| RIKEN cDNA 2700038E08 [Mus musculus... 57 2e-06
gi|39589880|emb|CAE60878.1| Hypothetical protein CBG04590 [Caeno... 57 3e-06
gi|49069002|ref|XP_398790.1| hypothetical protein UM01175.1 [Ust... 56 4e-06
gi|5565687|gb|AAD45198.1| topoisomerase-related function protein... 56 5e-06
gi|50795986|ref|XP_428151.1| PREDICTED: similar to RNA binding m... 56 5e-06
gi|18376835|gb|AAK38334.1| 3' terminal uridylyl transferase [Try... 56 5e-06
gi|34873448|ref|XP_225072.2| similar to polymerase (DNA directed... 55 7e-06
gi|18676470|dbj|BAB84887.1| FLJ00132 protein [Homo sapiens] 55 9e-06
gi|12383074|ref|NP_073741.1| RNA binding motif protein 21; PAP a... 55 9e-06
gi|50255372|gb|EAL18107.1| hypothetical protein CNBK1280 [Crypto... 55 9e-06
gi|10438584|dbj|BAB15282.1| unnamed protein product [Homo sapien... 55 1e-05
gi|39589172|emb|CAE57905.1| Hypothetical protein CBG00955 [Caeno... 55 1e-05
gi|50557292|ref|XP_506054.1| hypothetical protein [Yarrowia lipo... 54 1e-05
gi|6324030|ref|NP_014100.1| TRF4 homolog; TRF4/5 function is req... 54 1e-05
gi|18376833|gb|AAK38333.1| 3' terminal uridylyl transferase [Lei... 54 1e-05
gi|1493831|gb|AAC49397.1| Trf5p 53 3e-05
gi|50736317|ref|XP_426058.1| PREDICTED: similar to topoisomerase... 53 4e-05
gi|17558884|ref|NP_506597.1| tRNA modification enzyme (5P0) [Cae... 53 4e-05
gi|39582358|emb|CAE67607.1| Hypothetical protein CBG13152 [Caeno... 52 6e-05
gi|46437507|gb|EAK96852.1| hypothetical protein CaO19.429 [Candi... 52 6e-05
gi|38073441|gb|AAR10842.1| RET2; TcMP57 [Trypanosoma cruzi] 51 1e-04
gi|38089392|ref|XP_134422.4| similar to hypothetical protein [Mu... 51 1e-04
gi|34851487|ref|XP_226334.2| similar to hypothetical protein [Ra... 51 1e-04
gi|31242233|ref|XP_321547.1| ENSANGP00000017407 [Anopheles gambi... 51 2e-04
gi|50761563|ref|XP_424766.1| PREDICTED: similar to RIKEN cDNA 80... 51 2e-04
gi|31242235|ref|XP_321548.1| ENSANGP00000023289 [Anopheles gambi... 51 2e-04
gi|45553899|ref|NP_996325.1| CG11418-PB [Drosophila melanogaster... 51 2e-04
gi|50302781|ref|XP_451327.1| unnamed protein product [Kluyveromy... 50 2e-04
gi|42565594|ref|NP_190161.2| expressed protein [Arabidopsis thal... 50 3e-04
gi|38348448|ref|NP_941002.1| polymerase (DNA directed) sigma [Mu... 50 3e-04
gi|5902142|ref|NP_008930.1| polymerase (DNA directed) sigma; top... 50 3e-04
gi|45190400|ref|NP_984654.1| AEL207Wp [Eremothecium gossypii] >g... 50 3e-04
gi|11358395|pir||T47515 hypothetical protein T6D9.80 - Arabidops... 50 3e-04
gi|38073407|gb|AAR10825.1| RET2; LmMP57 [Leishmania major] 49 5e-04
gi|50753709|ref|XP_414098.1| PREDICTED: similar to hypothetical ... 49 5e-04
gi|28828897|gb|AAL92333.2| similar to conserved hypothetical pro... 49 6e-04
gi|50751608|ref|XP_422476.1| PREDICTED: similar to The KIAA0191 ... 49 6e-04
gi|49899785|gb|AAH76872.1| Unknown (protein for IMAGE:6859184) [... 49 6e-04
gi|29293910|gb|AAO63567.1| RNA editing complex protein MP57 [Try... 49 8e-04
gi|46229540|gb|EAK90358.1| TRF4/5 nucletotidyl transferase [Cryp... 49 8e-04
gi|38101453|gb|EAA48415.1| hypothetical protein MG00073.4 [Magna... 48 0.001
gi|47229501|emb|CAF99489.1| unnamed protein product [Tetraodon n... 48 0.001
gi|24649854|ref|NP_651313.1| CG17462-PA [Drosophila melanogaster... 47 0.002
gi|45554544|ref|NP_996381.1| CG11265-PE [Drosophila melanogaster... 47 0.003
gi|24640625|ref|NP_572490.1| CG11265-PA [Drosophila melanogaster... 47 0.003
gi|5565689|gb|AAD45199.1| topoisomerase-related function protein... 46 0.004
gi|49068484|ref|XP_398531.1| hypothetical protein UM00916.1 [Ust... 46 0.004
gi|21240658|gb|AAM44369.1| putative protein contains similarity ... 46 0.005
gi|21739473|emb|CAD38778.1| hypothetical protein [Homo sapiens] 46 0.005
gi|31202723|ref|XP_310310.1| ENSANGP00000015229 [Anopheles gambi... 46 0.005
gi|45643057|gb|AAS72421.1| monkey king protein [Drosophila simul... 45 0.007
gi|45643059|gb|AAS72422.1| monkey king protein [Drosophila seche... 45 0.007
gi|45643063|gb|AAS72424.1| monkey king protein [Drosophila mauri... 45 0.009
gi|50294195|ref|XP_449509.1| unnamed protein product [Candida gl... 45 0.009
gi|45643055|gb|AAS72420.1| monkey king protein [Drosophila mauri... 45 0.012
gi|50258612|gb|EAL21299.1| hypothetical protein CNBD3530 [Crypto... 44 0.020
gi|11875977|emb|CAC18866.1| possible caffeine-induced death prot... 44 0.020
gi|13518085|gb|AAK27383.1| hypothetical protein [Leishmania dono... 44 0.020
gi|45643051|gb|AAS72418.1| monkey king protein [Drosophila simul... 42 0.057
gi|46361675|gb|AAS89332.1| monkey-king [Drosophila simulans] 42 0.057
gi|21355937|ref|NP_648219.1| CG7163-PB [Drosophila melanogaster]... 42 0.098
gi|45643047|gb|AAS72416.1| monkey king protein [Drosophila melan... 42 0.098
gi|46127561|ref|XP_388334.1| hypothetical protein FG08158.1 [Gib... 41 0.13
gi|7530121|emb|CAB86702.1| hypothetical L3640.07 [Leishmania major] 41 0.13
gi|45643053|gb|AAS72419.1| monkey king protein [Drosophila seche... 40 0.22
gi|30425216|ref|NP_780681.1| zinc finger, CCHC domain containing... 40 0.22
gi|23481547|gb|EAA17794.1| topoisomerase-related function protei... 40 0.29
gi|31202725|ref|XP_310311.1| ENSANGP00000015102 [Anopheles gambi... 40 0.29
gi|50512170|gb|AAT77544.1| terminal uridylyltransferase 3 [Trypa... 40 0.29
gi|34870168|ref|XP_233345.2| similar to developmental control pr... 40 0.37
gi|37531868|ref|NP_920236.1| unknown protein [Oryza sativa (japo... 39 0.83
gi|10435416|dbj|BAB14584.1| unnamed protein product [Homo sapiens] 38 1.1
gi|45736111|dbj|BAD13142.1| unknown protein [Oryza sativa (japon... 38 1.1
gi|49096742|ref|XP_409831.1| hypothetical protein AN5694.2 [Aspe... 37 1.8
gi|38109740|gb|EAA55563.1| predicted protein [Magnaporthe grisea... 37 1.8
gi|23619265|ref|NP_705227.1| hypothetical protein [Plasmodium fa... 37 2.4
gi|29245161|gb|EAA36817.1| GLP_397_15207_14431 [Giardia lamblia ... 37 2.4
gi|34898120|ref|NP_910406.1| poly(A) polymerase-like protein [Or... 36 4.1
gi|47208938|emb|CAF89885.1| unnamed protein product [Tetraodon n... 36 5.4
gi|31077327|gb|EAA46453.1| GLP_90_20924_22486 [Giardia lamblia A... 35 9.2
>gi|7510679|pir||T32275 hypothetical protein ZC308.1 - Caenorhabditis
elegans
gi|27714038|gb|AAO21477.1| Defective in germ line development protein
2, isoform b [Caenorhabditis elegans]
Length = 871
Score = 1290 bits (3338), Expect = 0.0
Identities = 662/871 (76%), Positives = 662/871 (76%)
Frame = +1
Query: 1 MPSSIICDVSHEGEAXXXXXXXXRISNGFSHTVCDLHHNFPIVKNRRKYHNXXXXXXXXX 180
MPSSIICDVSHEGEA RISNGFSHTVCDLHHNFPIVKNRRKYHN
Sbjct: 1 MPSSIICDVSHEGEASGGPSPSSRISNGFSHTVCDLHHNFPIVKNRRKYHNSISTQSSSS 60
Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXEKDVQTFLVSXXXXXXXXXXXXXXXXXXXXXX 360
EKDVQTFLVS
Sbjct: 61 TTTSLERISTSTCTSTSSSASDAIISRAEKDVQTFLVSDESTTGDHEEEEEDDEDGDDES 120
Query: 361 XXXXXXXXXXXXRSXXXXXXXXXXXXXXXXXPFVSSWCFAMGTQRSVMSSVGEKAPKSNV 540
RS PFVSSWCFAMGTQRSVMSSVGEKAPKSNV
Sbjct: 121 DHNDYDYEDDGERSEHDHEQTDNDDDEDEIEPFVSSWCFAMGTQRSVMSSVGEKAPKSNV 180
Query: 541 KSMEDWELDVVERAHRESHLAELYADLSWRFYTHPPTSFCLARVFLRHGLTGNEGVSSWK 720
KSMEDWELDVVERAHRESHLAELYADLSWRFYTHPPTSFCLARVFLRHGLTGNEGVSSWK
Sbjct: 181 KSMEDWELDVVERAHRESHLAELYADLSWRFYTHPPTSFCLARVFLRHGLTGNEGVSSWK 240
Query: 721 LPRKANRRNXXXXXXXXXXXXXXXXALDESTLTKILPTDNFRGGRGFAXXXXXXXXXXXX 900
LPRKANRRN ALDESTLTKILPTDNFRGGRGFA
Sbjct: 241 LPRKANRRNSSCSSISSVSESSSPSALDESTLTKILPTDNFRGGRGFASPSPPTSLLSEP 300
Query: 901 XXRMDVLSEKIWDYHNKVSQTDEMLQRKLHLRDMLYTAISPVFPLSGLYVVXXXXXXXXX 1080
RMDVLSEKIWDYHNKVSQTDEMLQRKLHLRDMLYTAISPVFPLSGLYVV
Sbjct: 301 LSRMDVLSEKIWDYHNKVSQTDEMLQRKLHLRDMLYTAISPVFPLSGLYVVGSSLNGFGN 360
Query: 1081 XXXDMDLCLMITNKDLDQKNDAVVVLNLILSTLQYEKFVESQKLILAKVPILRINFAAPF 1260
DMDLCLMITNKDLDQKNDAVVVLNLILSTLQYEKFVESQKLILAKVPILRINFAAPF
Sbjct: 361 NSSDMDLCLMITNKDLDQKNDAVVVLNLILSTLQYEKFVESQKLILAKVPILRINFAAPF 420
Query: 1261 DDITVDLNANNSVAIRNTHLLCYYSSYDWRVRPLVSVVKEWAKRKGINDANKSSFTSYSL 1440
DDITVDLNANNSVAIRNTHLLCYYSSYDWRVRPLVSVVKEWAKRKGINDANKSSFTSYSL
Sbjct: 421 DDITVDLNANNSVAIRNTHLLCYYSSYDWRVRPLVSVVKEWAKRKGINDANKSSFTSYSL 480
Query: 1441 VLMVIHFLQCGPTKVLPNLQQSYPNRFSNKVDVRTLNVTMALEEVADDIDQSLSEKTTLG 1620
VLMVIHFLQCGPTKVLPNLQQSYPNRFSNKVDVRTLNVTMALEEVADDIDQSLSEKTTLG
Sbjct: 481 VLMVIHFLQCGPTKVLPNLQQSYPNRFSNKVDVRTLNVTMALEEVADDIDQSLSEKTTLG 540
Query: 1621 ELLIGFLDYYANEFNYDRDAISIRQGRRVERAALAVRPKIHSNSEGDKEXXXXXXXXXXX 1800
ELLIGFLDYYANEFNYDRDAISIRQGRRVERAALAVRPKIHSNSEGDKE
Sbjct: 541 ELLIGFLDYYANEFNYDRDAISIRQGRRVERAALAVRPKIHSNSEGDKETPPPSSSASTS 600
Query: 1801 XIHNGGTPGIPMHHSISNPHFWRSQWRCVCIEEPFTNSNTAHSIYDEMVFEAIKKAFREA 1980
IHNGGTPGIPMHHSISNPHFWRSQWRCVCIEEPFTNSNTAHSIYDEMVFEAIKKAFREA
Sbjct: 601 SIHNGGTPGIPMHHSISNPHFWRSQWRCVCIEEPFTNSNTAHSIYDEMVFEAIKKAFREA 660
Query: 1981 HGELQHNHDLDKLMECEPIKASTTNTGAAVFAATYEGERPLAQQPNTIACASLRVLNSIP 2160
HGELQHNHDLDKLMECEPIKASTTNTGAAVFAATYEGERPLAQQPNTIACASLRVLNSIP
Sbjct: 661 HGELQHNHDLDKLMECEPIKASTTNTGAAVFAATYEGERPLAQQPNTIACASLRVLNSIP 720
Query: 2161 VSSGPGHYHYQQQSNQNLSRPQRPGSNQGYQMXXXXXXXXXXXXXXXXXXXXXXXXXXXX 2340
VSSGPGHYHYQQQSNQNLSRPQRPGSNQGYQM
Sbjct: 721 VSSGPGHYHYQQQSNQNLSRPQRPGSNQGYQMNNNRGFNGNNQQQHQNRRSFNNQSSSNP 780
Query: 2341 XXXXXXXXXXXXXENVRDSSRXXXXXXXXXXXXXXXXXXASTTGVPVDKKQQNSNRKDDG 2520
ENVRDSSR ASTTGVPVDKKQQNSNRKDDG
Sbjct: 781 GNGSTGPRSSRSNENVRDSSRQQNSQKGSSGVSVSKENVASTTGVPVDKKQQNSNRKDDG 840
Query: 2521 NRTKRSPMVQSPEPAKTKSEKTPMASSNVSQ 2613
NRTKRSPMVQSPEPAKTKSEKTPMASSNVSQ
Sbjct: 841 NRTKRSPMVQSPEPAKTKSEKTPMASSNVSQ 871
>gi|27714040|gb|AAO21479.1| Defective in germ line development protein
2, isoform d [Caenorhabditis elegans]
Length = 807
Score = 1015 bits (2625), Expect = 0.0
Identities = 520/640 (81%), Positives = 522/640 (81%)
Frame = +1
Query: 694 GNEGVSSWKLPRKANRRNXXXXXXXXXXXXXXXXALDESTLTKILPTDNFRGGRGFAXXX 873
G E + +LPRKANRRN ALDESTLTKILPTDNFRGGRGFA
Sbjct: 168 GTEEKALNELPRKANRRNSSCSSISSVSESSSPSALDESTLTKILPTDNFRGGRGFASPS 227
Query: 874 XXXXXXXXXXXRMDVLSEKIWDYHNKVSQTDEMLQRKLHLRDMLYTAISPVFPLSGLYVV 1053
RMDVLSEKIWDYHNKVSQTDEMLQRKLHLRDMLYTAISPVFPLSGLYVV
Sbjct: 228 PPTSLLSEPLSRMDVLSEKIWDYHNKVSQTDEMLQRKLHLRDMLYTAISPVFPLSGLYVV 287
Query: 1054 XXXXXXXXXXXXDMDLCLMITNKDLDQKNDAVVVLNLILSTLQYEKFVESQKLILAKVPI 1233
DMDLCLMITNKDLDQKNDAVVVLNLILSTLQYEKFVESQKLILAKVPI
Sbjct: 288 GSSLNGFGNNSSDMDLCLMITNKDLDQKNDAVVVLNLILSTLQYEKFVESQKLILAKVPI 347
Query: 1234 LRINFAAPFDDITVDLNANNSVAIRNTHLLCYYSSYDWRVRPLVSVVKEWAKRKGINDAN 1413
LRINFAAPFDDITVDLNANNSVAIRNTHLLCYYSSYDWRVRPLVSVVKEWAKRKGINDAN
Sbjct: 348 LRINFAAPFDDITVDLNANNSVAIRNTHLLCYYSSYDWRVRPLVSVVKEWAKRKGINDAN 407
Query: 1414 KSSFTSYSLVLMVIHFLQCGPTKVLPNLQQSYPNRFSNKVDVRTLNVTMALEEVADDIDQ 1593
KSSFTSYSLVLMVIHFLQCGPTKVLPNLQQSYPNRFSNKVDVRTLNVTMALEEVADDIDQ
Sbjct: 408 KSSFTSYSLVLMVIHFLQCGPTKVLPNLQQSYPNRFSNKVDVRTLNVTMALEEVADDIDQ 467
Query: 1594 SLSEKTTLGELLIGFLDYYANEFNYDRDAISIRQGRRVERAALAVRPKIHSNSEGDKEXX 1773
SLSEKTTLGELLIGFLDYYANEFNYDRDAISIRQGRRVERAALAVRPKIHSNSEGDKE
Sbjct: 468 SLSEKTTLGELLIGFLDYYANEFNYDRDAISIRQGRRVERAALAVRPKIHSNSEGDKETP 527
Query: 1774 XXXXXXXXXXIHNGGTPGIPMHHSISNPHFWRSQWRCVCIEEPFTNSNTAHSIYDEMVFE 1953
IHNGGTPGIPMHHSISNPHFWRSQWRCVCIEEPFTNSNTAHSIYDEMVFE
Sbjct: 528 PPSSSASTSSIHNGGTPGIPMHHSISNPHFWRSQWRCVCIEEPFTNSNTAHSIYDEMVFE 587
Query: 1954 AIKKAFREAHGELQHNHDLDKLMECEPIKASTTNTGAAVFAATYEGERPLAQQPNTIACA 2133
AIKKAFREAHGELQHNHDLDKLMECEPIKASTTNTGAAVFAATYEGERPLAQQPNTIACA
Sbjct: 588 AIKKAFREAHGELQHNHDLDKLMECEPIKASTTNTGAAVFAATYEGERPLAQQPNTIACA 647
Query: 2134 SLRVLNSIPVSSGPGHYHYQQQSNQNLSRPQRPGSNQGYQMXXXXXXXXXXXXXXXXXXX 2313
SLRVLNSIPVSSGPGHYHYQQQSNQNLSRPQRPGSNQGYQM
Sbjct: 648 SLRVLNSIPVSSGPGHYHYQQQSNQNLSRPQRPGSNQGYQMNNNRGFNGNNQQQHQNRRS 707
Query: 2314 XXXXXXXXXXXXXXXXXXXXXXENVRDSSRXXXXXXXXXXXXXXXXXXASTTGVPVDKKQ 2493
ENVRDSSR ASTTGVPVDKKQ
Sbjct: 708 FNNQSSSNPGNGSTGPRSSRSNENVRDSSRQQNSQKGSSGVSVSKENVASTTGVPVDKKQ 767
Query: 2494 QNSNRKDDGNRTKRSPMVQSPEPAKTKSEKTPMASSNVSQ 2613
QNSNRKDDGNRTKRSPMVQSPEPAKTKSEKTPMASSNVSQ
Sbjct: 768 QNSNRKDDGNRTKRSPMVQSPEPAKTKSEKTPMASSNVSQ 807
>gi|32563609|ref|NP_491842.2| regulatory cytoplasmic polyA polymerase
family member, defective in Germ Line Development GLD-2,
LEThal LET-606 (124.6 kD) (gld-2) [Caenorhabditis
elegans]
gi|23306648|gb|AAM94369.1| regulatory cytoplasmic polyA polymerase
[Caenorhabditis elegans]
gi|26251509|gb|AAB70342.2| Defective in germ line development protein
2, isoform a [Caenorhabditis elegans]
Length = 1113
Score = 1015 bits (2625), Expect = 0.0
Identities = 520/640 (81%), Positives = 522/640 (81%)
Frame = +1
Query: 694 GNEGVSSWKLPRKANRRNXXXXXXXXXXXXXXXXALDESTLTKILPTDNFRGGRGFAXXX 873
G E + +LPRKANRRN ALDESTLTKILPTDNFRGGRGFA
Sbjct: 474 GTEEKALNELPRKANRRNSSCSSISSVSESSSPSALDESTLTKILPTDNFRGGRGFASPS 533
Query: 874 XXXXXXXXXXXRMDVLSEKIWDYHNKVSQTDEMLQRKLHLRDMLYTAISPVFPLSGLYVV 1053
RMDVLSEKIWDYHNKVSQTDEMLQRKLHLRDMLYTAISPVFPLSGLYVV
Sbjct: 534 PPTSLLSEPLSRMDVLSEKIWDYHNKVSQTDEMLQRKLHLRDMLYTAISPVFPLSGLYVV 593
Query: 1054 XXXXXXXXXXXXDMDLCLMITNKDLDQKNDAVVVLNLILSTLQYEKFVESQKLILAKVPI 1233
DMDLCLMITNKDLDQKNDAVVVLNLILSTLQYEKFVESQKLILAKVPI
Sbjct: 594 GSSLNGFGNNSSDMDLCLMITNKDLDQKNDAVVVLNLILSTLQYEKFVESQKLILAKVPI 653
Query: 1234 LRINFAAPFDDITVDLNANNSVAIRNTHLLCYYSSYDWRVRPLVSVVKEWAKRKGINDAN 1413
LRINFAAPFDDITVDLNANNSVAIRNTHLLCYYSSYDWRVRPLVSVVKEWAKRKGINDAN
Sbjct: 654 LRINFAAPFDDITVDLNANNSVAIRNTHLLCYYSSYDWRVRPLVSVVKEWAKRKGINDAN 713
Query: 1414 KSSFTSYSLVLMVIHFLQCGPTKVLPNLQQSYPNRFSNKVDVRTLNVTMALEEVADDIDQ 1593
KSSFTSYSLVLMVIHFLQCGPTKVLPNLQQSYPNRFSNKVDVRTLNVTMALEEVADDIDQ
Sbjct: 714 KSSFTSYSLVLMVIHFLQCGPTKVLPNLQQSYPNRFSNKVDVRTLNVTMALEEVADDIDQ 773
Query: 1594 SLSEKTTLGELLIGFLDYYANEFNYDRDAISIRQGRRVERAALAVRPKIHSNSEGDKEXX 1773
SLSEKTTLGELLIGFLDYYANEFNYDRDAISIRQGRRVERAALAVRPKIHSNSEGDKE
Sbjct: 774 SLSEKTTLGELLIGFLDYYANEFNYDRDAISIRQGRRVERAALAVRPKIHSNSEGDKETP 833
Query: 1774 XXXXXXXXXXIHNGGTPGIPMHHSISNPHFWRSQWRCVCIEEPFTNSNTAHSIYDEMVFE 1953
IHNGGTPGIPMHHSISNPHFWRSQWRCVCIEEPFTNSNTAHSIYDEMVFE
Sbjct: 834 PPSSSASTSSIHNGGTPGIPMHHSISNPHFWRSQWRCVCIEEPFTNSNTAHSIYDEMVFE 893
Query: 1954 AIKKAFREAHGELQHNHDLDKLMECEPIKASTTNTGAAVFAATYEGERPLAQQPNTIACA 2133
AIKKAFREAHGELQHNHDLDKLMECEPIKASTTNTGAAVFAATYEGERPLAQQPNTIACA
Sbjct: 894 AIKKAFREAHGELQHNHDLDKLMECEPIKASTTNTGAAVFAATYEGERPLAQQPNTIACA 953
Query: 2134 SLRVLNSIPVSSGPGHYHYQQQSNQNLSRPQRPGSNQGYQMXXXXXXXXXXXXXXXXXXX 2313
SLRVLNSIPVSSGPGHYHYQQQSNQNLSRPQRPGSNQGYQM
Sbjct: 954 SLRVLNSIPVSSGPGHYHYQQQSNQNLSRPQRPGSNQGYQMNNNRGFNGNNQQQHQNRRS 1013
Query: 2314 XXXXXXXXXXXXXXXXXXXXXXENVRDSSRXXXXXXXXXXXXXXXXXXASTTGVPVDKKQ 2493
ENVRDSSR ASTTGVPVDKKQ
Sbjct: 1014 FNNQSSSNPGNGSTGPRSSRSNENVRDSSRQQNSQKGSSGVSVSKENVASTTGVPVDKKQ 1073
Query: 2494 QNSNRKDDGNRTKRSPMVQSPEPAKTKSEKTPMASSNVSQ 2613
QNSNRKDDGNRTKRSPMVQSPEPAKTKSEKTPMASSNVSQ
Sbjct: 1074 QNSNRKDDGNRTKRSPMVQSPEPAKTKSEKTPMASSNVSQ 1113
>gi|32562829|ref|NP_491841.2| defective in germ line development
protein 2 family member (1G953) [Caenorhabditis elegans]
gi|27714039|gb|AAO21478.1| Defective in germ line development protein
2, isoform c [Caenorhabditis elegans]
Length = 1036
Score = 1015 bits (2625), Expect = 0.0
Identities = 520/640 (81%), Positives = 522/640 (81%)
Frame = +1
Query: 694 GNEGVSSWKLPRKANRRNXXXXXXXXXXXXXXXXALDESTLTKILPTDNFRGGRGFAXXX 873
G E + +LPRKANRRN ALDESTLTKILPTDNFRGGRGFA
Sbjct: 397 GTEEKALNELPRKANRRNSSCSSISSVSESSSPSALDESTLTKILPTDNFRGGRGFASPS 456
Query: 874 XXXXXXXXXXXRMDVLSEKIWDYHNKVSQTDEMLQRKLHLRDMLYTAISPVFPLSGLYVV 1053
RMDVLSEKIWDYHNKVSQTDEMLQRKLHLRDMLYTAISPVFPLSGLYVV
Sbjct: 457 PPTSLLSEPLSRMDVLSEKIWDYHNKVSQTDEMLQRKLHLRDMLYTAISPVFPLSGLYVV 516
Query: 1054 XXXXXXXXXXXXDMDLCLMITNKDLDQKNDAVVVLNLILSTLQYEKFVESQKLILAKVPI 1233
DMDLCLMITNKDLDQKNDAVVVLNLILSTLQYEKFVESQKLILAKVPI
Sbjct: 517 GSSLNGFGNNSSDMDLCLMITNKDLDQKNDAVVVLNLILSTLQYEKFVESQKLILAKVPI 576
Query: 1234 LRINFAAPFDDITVDLNANNSVAIRNTHLLCYYSSYDWRVRPLVSVVKEWAKRKGINDAN 1413
LRINFAAPFDDITVDLNANNSVAIRNTHLLCYYSSYDWRVRPLVSVVKEWAKRKGINDAN
Sbjct: 577 LRINFAAPFDDITVDLNANNSVAIRNTHLLCYYSSYDWRVRPLVSVVKEWAKRKGINDAN 636
Query: 1414 KSSFTSYSLVLMVIHFLQCGPTKVLPNLQQSYPNRFSNKVDVRTLNVTMALEEVADDIDQ 1593
KSSFTSYSLVLMVIHFLQCGPTKVLPNLQQSYPNRFSNKVDVRTLNVTMALEEVADDIDQ
Sbjct: 637 KSSFTSYSLVLMVIHFLQCGPTKVLPNLQQSYPNRFSNKVDVRTLNVTMALEEVADDIDQ 696
Query: 1594 SLSEKTTLGELLIGFLDYYANEFNYDRDAISIRQGRRVERAALAVRPKIHSNSEGDKEXX 1773
SLSEKTTLGELLIGFLDYYANEFNYDRDAISIRQGRRVERAALAVRPKIHSNSEGDKE
Sbjct: 697 SLSEKTTLGELLIGFLDYYANEFNYDRDAISIRQGRRVERAALAVRPKIHSNSEGDKETP 756
Query: 1774 XXXXXXXXXXIHNGGTPGIPMHHSISNPHFWRSQWRCVCIEEPFTNSNTAHSIYDEMVFE 1953
IHNGGTPGIPMHHSISNPHFWRSQWRCVCIEEPFTNSNTAHSIYDEMVFE
Sbjct: 757 PPSSSASTSSIHNGGTPGIPMHHSISNPHFWRSQWRCVCIEEPFTNSNTAHSIYDEMVFE 816
Query: 1954 AIKKAFREAHGELQHNHDLDKLMECEPIKASTTNTGAAVFAATYEGERPLAQQPNTIACA 2133
AIKKAFREAHGELQHNHDLDKLMECEPIKASTTNTGAAVFAATYEGERPLAQQPNTIACA
Sbjct: 817 AIKKAFREAHGELQHNHDLDKLMECEPIKASTTNTGAAVFAATYEGERPLAQQPNTIACA 876
Query: 2134 SLRVLNSIPVSSGPGHYHYQQQSNQNLSRPQRPGSNQGYQMXXXXXXXXXXXXXXXXXXX 2313
SLRVLNSIPVSSGPGHYHYQQQSNQNLSRPQRPGSNQGYQM
Sbjct: 877 SLRVLNSIPVSSGPGHYHYQQQSNQNLSRPQRPGSNQGYQMNNNRGFNGNNQQQHQNRRS 936
Query: 2314 XXXXXXXXXXXXXXXXXXXXXXENVRDSSRXXXXXXXXXXXXXXXXXXASTTGVPVDKKQ 2493
ENVRDSSR ASTTGVPVDKKQ
Sbjct: 937 FNNQSSSNPGNGSTGPRSSRSNENVRDSSRQQNSQKGSSGVSVSKENVASTTGVPVDKKQ 996
Query: 2494 QNSNRKDDGNRTKRSPMVQSPEPAKTKSEKTPMASSNVSQ 2613
QNSNRKDDGNRTKRSPMVQSPEPAKTKSEKTPMASSNVSQ
Sbjct: 997 QNSNRKDDGNRTKRSPMVQSPEPAKTKSEKTPMASSNVSQ 1036
>gi|39595675|emb|CAE67177.1| Hypothetical protein CBG12609
[Caenorhabditis briggsae]
Length = 859
Score = 975 bits (2520), Expect = 0.0
Identities = 514/871 (59%), Positives = 569/871 (65%), Gaps = 2/871 (0%)
Frame = +1
Query: 7 SSIICDVSHEGEAXXXXXXXXRISNGFSHTVCD-LHHNFPIVKNRRKYHNXXXXXXXXXX 183
SS+IC+V H G+ S+ S T+ D +H F NRRKY+N
Sbjct: 1 SSMICNVLHGGDRTVAGEDSPTQSSPSSRTMNDGFNHTFST--NRRKYYNSISTQSSSST 58
Query: 184 XXXXXXXXXXXXXXXXXXXXXXXXXXXEKDVQTFLVSXXXXXXXXXXXXXXXXXXXXXXX 363
EKDVQT LVS
Sbjct: 59 TTSLDRISTSTYTSSVSSASEACMSRAEKDVQTMLVSDASVEGDDEKEENDSDSYDYDDV 118
Query: 364 XXXXXXXXXXXRSXXXXXXXXXXXXXXXXXPFVSSWCFAMGTQRSVMSSVGEKAPKSNVK 543
+ W FAMG QR +++SVGEKAPKSNV+
Sbjct: 119 ESDTMGTEEDHMGDEDAGEHGEGDS-------MEPWSFAMGQQRYMINSVGEKAPKSNVE 171
Query: 544 SMEDWELDVVERAHRESHLAELYADLSWRFYTHPPTSFCLARVFLRHGLTGNEGVSSWKL 723
SMEDWELDVVERAHR+S LAELY+DL+WRFYTHPPTSFCLARVF+RHGL+GNEG++ WKL
Sbjct: 172 SMEDWELDVVERAHRDSRLAELYSDLAWRFYTHPPTSFCLARVFMRHGLSGNEGITVWKL 231
Query: 724 PRKANRRNXXXXXXXXXXXXXXXXALDESTLTKILPTDNFRGGRGFAXXXXXXXXXXXXX 903
PRK NRR+ LDESTLTK+ P + FRGG G A
Sbjct: 232 PRKTNRRDSICSNASSASDVCSP-VLDESTLTKVYPNEEFRGGPGLASPSPPAALLSEPL 290
Query: 904 XRMDVLSEKIWDYHNKVSQTDEMLQRKLHLRDMLYTAISPVFPLSGLYVVXXXXXXXXXX 1083
RMDVLSEKIWDYHNKVSQTDEMLQRKLHLRDMLYTAISPVFPLSGLYVV
Sbjct: 291 SRMDVLSEKIWDYHNKVSQTDEMLQRKLHLRDMLYTAISPVFPLSGLYVVGSSLNGFGNN 350
Query: 1084 XXDMDLCLMITNKDLDQKNDAVVVLNLILSTLQYEKFVESQKLILAKVPILRINFAAPFD 1263
DMDLCLMITNKDLDQKNDAVVVLNLILSTLQYEKFV SQKLILAKVPILRI FAAPFD
Sbjct: 351 SSDMDLCLMITNKDLDQKNDAVVVLNLILSTLQYEKFVASQKLILAKVPILRIKFAAPFD 410
Query: 1264 DITVDLNANNSVAIRNTHLLCYYSSYDWRVRPLVSVVKEWAKRKGINDANKSSFTSYSLV 1443
DITVDLNANNSVAIRNTHLLCYYSSYDWRVRPLVSVVKEWAKRKGINDANKSSFTSYSLV
Sbjct: 411 DITVDLNANNSVAIRNTHLLCYYSSYDWRVRPLVSVVKEWAKRKGINDANKSSFTSYSLV 470
Query: 1444 LMVIHFLQCG-PTKVLPNLQQSYPNRFSNKVDVRTLNVTMALEEVADDIDQSLSEKTTLG 1620
LMVIH+LQCG +VLPNLQQSYP RFSNKVDVRTLNVTM LE V DDID SLSE TTLG
Sbjct: 471 LMVIHYLQCGTEARVLPNLQQSYPTRFSNKVDVRTLNVTMPLEPVQDDIDPSLSENTTLG 530
Query: 1621 ELLIGFLDYYANEFNYDRDAISIRQGRRVERAALAVRPKIHSNSEGDKEXXXXXXXXXXX 1800
ELLIGFLDYYANEFNYDRDAISIRQG+RVERAALAVRPK+H +SEG+KE
Sbjct: 531 ELLIGFLDYYANEFNYDRDAISIRQGKRVERAALAVRPKVHLSSEGEKEAPLPSSSASSS 590
Query: 1801 XIHNGGTPGIPMHHSISNPHFWRSQWRCVCIEEPFTNSNTAHSIYDEMVFEAIKKAFREA 1980
+HNG G+PMHHS+SNPHFWRSQWRCVCIEEPFTNSNTAHSIYDEMVF AIK+AFREA
Sbjct: 591 SVHNG--IGVPMHHSLSNPHFWRSQWRCVCIEEPFTNSNTAHSIYDEMVFGAIKEAFREA 648
Query: 1981 HGELQHNHDLDKLMECEPIKASTTNTGAAVFAATYEGERPLAQQPNTIACASLRVLNSIP 2160
H ELQ N DLD+L+ECEPIKASTTN GAAVFAATYEGERP AQQP +IA ASLR +N +P
Sbjct: 649 HSELQDNRDLDRLLECEPIKASTTNAGAAVFAATYEGERPSAQQPTSIASASLRTMNVVP 708
Query: 2161 VSSGPGHYHYQQQSNQNLSRPQRPGSNQGYQMXXXXXXXXXXXXXXXXXXXXXXXXXXXX 2340
+G GHYHYQQQS+Q + + QR G+NQ Y
Sbjct: 709 TPAGGGHYHYQQQSSQQVLKQQRSGNNQSYPSSNNRSSNSNQQQNRRVYNSQSAFNGSGS 768
Query: 2341 XXXXXXXXXXXXXENVRDSSRXXXXXXXXXXXXXXXXXXASTTGVPVDKKQQNSNRKDDG 2520
N + S R ++ ++ ++++KD+G
Sbjct: 769 RPSKSSDSLKDSTSNSQQSHRQHHHNQRSNAGSTKENIALTSGATSSTDRKNSTSKKDEG 828
Query: 2521 NRTKRSPMVQSPEPAKTKSEKTPMASSNVSQ 2613
+RTKRS M+QSPEP K K+EKT SQ
Sbjct: 829 SRTKRSSMIQSPEPTKAKTEKTATTQKKESQ 859