Homology by BLASTX


BLASTX 2.2.4 [Aug-26-2002]
Query= Y92C3B_3
         (1491 letters)

Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
           1,967,186 sequences; 661,712,633 total letters


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|15487635|gb|AAL00879.1| U2af splicing factor protein 1, isofo...   734   0.0
gi|21245140|gb|AAM44400.1| U2af splicing factor protein 1, isofo...   734   0.0
gi|17556654|ref|NP_497326.1| U2AF splicing factor (55.4 kD) (uaf...   734   0.0
gi|39586050|emb|CAE69126.1| Hypothetical protein CBG15152 [Caeno...   709   0.0
gi|4033483|sp|P90727|U2AF_CAEBR Splicing factor U2AF 65 kDa subu...   709   0.0
gi|31206085|ref|XP_311994.1| ENSANGP00000018558 [Anopheles gambi...   465   e-129
gi|17136764|ref|NP_476891.1| CG9998-PA [Drosophila melanogaster]...   456   e-127
gi|34854490|ref|XP_218195.2| similar to splicing factor U2AF hom...   439   e-121
gi|14250571|gb|AAH08740.1| U2AF2 protein [Homo sapiens] >gnl|BL_...   439   e-121
gi|6005926|ref|NP_009210.1| U2 small nuclear ribonucleoprotein a...   437   e-121
gi|136628|sp|P26369|U2AF_MOUSE Splicing factor U2AF 65 kDa subun...   437   e-121
gi|107723|pir||S20250 splicing factor U2AF large chain - human >...   437   e-121
gi|110998|pir||S22646 splicing factor U2AF homolog - mouse >gnl|...   437   e-121
gi|47575746|ref|NP_001001217.1| hypothetical protein MGC69406 [X...   437   e-121
gi|27882060|gb|AAH44032.1| U2af2-prov protein [Xenopus laevis]        435   e-120
gi|47221657|emb|CAF97922.1| unnamed protein product [Tetraodon n...   431   e-119
gi|45387787|ref|NP_991252.1| hypothetical protein zgc:77804 [Dan...   419   e-116
gi|38087244|ref|XP_141947.2| similar to U2AF65 protein [Mus musc...   417   e-115
gi|38074194|ref|XP_124040.2| similar to U2AF65 protein [Mus musc...   398   e-109
gi|19526824|ref|NP_598432.1| U2 small nuclear ribonucleoprotein ...   359   1e-97
gi|24659166|ref|NP_611769.2| CG3162-PA [Drosophila melanogaster]...   333   8e-90
gi|18446992|gb|AAL68087.1| AT16577p [Drosophila melanogaster]         331   3e-89
gi|13559787|gb|AAK29990.1| U2af splicing factor protein 1, isofo...   290   6e-77
gi|49078454|ref|XP_402978.1| hypothetical protein UM05363.1 [Ust...   261   2e-68
gi|50257310|gb|EAL20019.1| hypothetical protein CNBF3460 [Crypto...   244   5e-63
gi|25404298|pir||E96634 probable U2 snRNP auxiliary factor T7P1....   244   5e-63
gi|30696485|ref|NP_176287.3| U2 snRNP auxiliary factor large sub...   244   5e-63
gi|22655131|gb|AAM98156.1| putative U2 snRNP auxiliary factor [A...   241   3e-62
gi|3850823|emb|CAA77136.1| U2 snRNP auxiliary factor, large subu...   235   2e-60
gi|3850821|emb|CAA77135.1| U2 snRNP auxiliary factor, large subu...   232   2e-59
gi|32419565|ref|XP_330226.1| hypothetical protein [Neurospora cr...   231   3e-59
gi|15234495|ref|NP_195387.1| U2 snRNP auxiliary factor large sub...   229   1e-58
gi|9858779|gb|AAG01126.1| BAC19.11 [Lycopersicon esculentum]          227   6e-58
gi|47217926|emb|CAG02209.1| unnamed protein product [Tetraodon n...   223   1e-56
gi|38101779|gb|EAA48690.1| hypothetical protein MG00348.4 [Magna...   221   3e-56
gi|49099943|ref|XP_410818.1| hypothetical protein AN6681.2 [Aspe...   216   1e-54
gi|46125343|ref|XP_387225.1| hypothetical protein FG07049.1 [Gib...   210   6e-53
gi|29367529|gb|AAO72620.1| putative U2 snRNP auxiliary factor [O...   194   4e-48
gi|30690730|ref|NP_849509.1| U2 snRNP auxiliary factor large sub...   183   1e-44
gi|42573197|ref|NP_974695.1| U2 snRNP auxiliary factor large sub...   181   5e-44
gi|23479360|gb|EAA16211.1| splicing factor-like protein, putativ...   163   1e-38
gi|23509878|ref|NP_702545.1| U2 snRNP auxiliary factor, putative...   160   6e-38
gi|47168466|pdb|1OPI|A Chain A, Solution Structure Of The Third ...   148   4e-34
gi|50552688|ref|XP_503754.1| hypothetical protein [Yarrowia lipo...   146   1e-33
gi|30749814|pdb|1O0P|A Chain A, Solution Structure Of The Third ...   146   1e-33
gi|19112188|ref|NP_595396.1| splicing factor U2AF 59 kd subunit ...   142   2e-32
gi|5822429|pdb|1U2F|A Chain A, Solution Structure Of The First R...   141   5e-32
gi|5822501|pdb|2U2F|A Chain A, Solution Structure Of The Second ...   114   6e-24
gi|25408271|pir||E84745 probable splicing factor U2AF large chai...   104   5e-21
gi|30685703|ref|NP_850210.1| splicing factor family protein [Ara...   100   1e-19
gi|18406905|ref|NP_564764.1| U2 snRNP auxiliary factor large sub...    97   1e-18
gi|34905724|ref|NP_914209.1| OJ1294_F06.3 [Oryza sativa (japonic...    94   6e-18
gi|47201140|emb|CAF88437.1| unnamed protein product [Tetraodon n...    92   3e-17
gi|17556606|ref|NP_497408.1| predicted CDS, u2af splicing factor...    91   7e-17
gi|50426247|ref|XP_461720.1| unnamed protein product [Debaryomyc...    89   2e-16
gi|23612532|ref|NP_704093.1| hypothetical protein [Plasmodium fa...    87   8e-16
gi|40254330|ref|NP_034763.3| kinase interacting with leukemia-as...    86   2e-15
gi|8393668|ref|NP_058989.1| KIS; PAM COOH-terminal interactor pr...    86   2e-15
gi|12850652|dbj|BAB28802.1| unnamed protein product [Mus musculus]     86   2e-15
gi|24211861|sp|P97343|KIST_MOUSE Serine/threonine-protein kinase...    86   2e-15
gi|21726713|emb|CAA71714.2| KIS protein kinase [Mus musculus]          86   2e-15
gi|26326137|dbj|BAC26812.1| unnamed protein product [Mus musculus]     86   2e-15
gi|50750976|ref|XP_422213.1| PREDICTED: similar to KIS kinase [G...    86   3e-15
gi|47215490|emb|CAG01598.1| unnamed protein product [Tetraodon n...    86   3e-15
gi|15928904|gb|AAH14917.1| Similar to kinase interacting with le...    85   5e-15
gi|28467003|ref|NP_787062.1| kinase interacting stathmin; KIS pr...    85   5e-15
gi|32398751|emb|CAD98711.1| splicing factor, possible [Cryptospo...    82   4e-14
gi|46227901|gb|EAK88821.1| splicing factor U2AF U2 SnRNP auxilia...    78   6e-13
gi|23484570|gb|EAA19861.1| KED [Plasmodium yoelii yoelii]              76   2e-12
gi|19920866|ref|NP_609095.1| CG11266-PB [Drosophila melanogaster...    76   2e-12
gi|46436988|gb|EAK96342.1| hypothetical protein CaO19.5828 [Cand...    76   2e-12
gi|46436920|gb|EAK96275.1| hypothetical protein CaO19.13250 [Can...    76   2e-12
gi|1171978|sp|P42731|PAB2_ARATH Polyadenylate-binding protein 2 ...    72   3e-11
gi|24582417|ref|NP_723245.1| CG11266-PC [Drosophila melanogaster...    72   3e-11
gi|46227619|gb|EAK88554.1| splicing factor U2AF like SnRNP auxil...    70   2e-10
gi|50553814|ref|XP_504318.1| hypothetical protein [Yarrowia lipo...    69   2e-10
gi|23487609|gb|EAA21097.1| 19096-22891 [Plasmodium yoelii yoelii]      69   2e-10
gi|30685698|ref|NP_850209.1| RNA recognition motif (RRM)-contain...    68   5e-10
gi|34860256|ref|XP_342558.1| similar to RNA-binding region (RNP1...    68   7e-10
gi|45361397|ref|NP_989276.1| hypothetical protein MGC75625 [Xeno...    67   9e-10
gi|7673355|gb|AAF66823.1| poly(A)-binding protein [Nicotiana tab...    67   1e-09
gi|31221129|ref|XP_317010.1| ENSANGP00000019306 [Anopheles gambi...    66   2e-09
gi|50552626|ref|XP_503723.1| hypothetical protein [Yarrowia lipo...    66   2e-09
gi|19347816|gb|AAL86321.1| putative poly(A)-binding protein [Ara...    66   2e-09
gi|13560783|gb|AAK30205.1| poly(A)-binding protein [Daucus carota]     65   4e-09
gi|31201653|ref|XP_309774.1| ENSANGP00000012477 [Anopheles gambi...    64   9e-09
gi|34015145|gb|AAQ56342.1| putative poly(A)-binding protein [Ory...    64   9e-09
gi|35215045|dbj|BAC92404.1| putative polyadenylate-binding prote...    64   9e-09
gi|24655233|ref|NP_728610.1| CG12085-PB [Drosophila melanogaster...    64   9e-09
gi|6118522|gb|AAF04132.1| poly-U binding splicing factor [Drosop...    64   9e-09
gi|19224321|gb|AAL86452.1| half pint [Drosophila melanogaster]         64   9e-09
gi|24655228|ref|NP_525123.2| CG12085-PA [Drosophila melanogaster...    64   9e-09
gi|16215606|emb|CAC95018.1| TIA-1 protein [Xenopus laevis]             64   1e-08
gi|50416510|gb|AAH77169.1| Unknown (protein for MGC:78766) [Xeno...    64   1e-08
gi|46227417|gb|EAK88352.1| Ro ribonucleoprotein-binding protein ...    64   1e-08
gi|23619211|ref|NP_705173.1| hypothetical protein [Plasmodium fa...    63   2e-08
gi|18398260|ref|NP_565399.1| RNA recognition motif (RRM)-contain...    62   3e-08
gi|21553746|gb|AAM62839.1| putative splicing factor [Arabidopsis...    62   3e-08
gi|20466772|gb|AAM20703.1| putative splicing factor [Arabidopsis...    62   3e-08
gi|31211119|ref|XP_314526.1| ENSANGP00000016235 [Anopheles gambi...    61   6e-08
gi|46389987|dbj|BAD16229.1| putative poly(A)-binding protein [Or...    61   6e-08
gi|50799071|ref|XP_424052.1| PREDICTED: similar to fuse-binding ...    61   6e-08
gi|19113461|ref|NP_596669.1| putative polyadenylation factor [Sc...    60   1e-07
gi|6094480|sp|P31483|TIA1_HUMAN Nucleolysin TIA-1 (RNA-binding p...    60   1e-07
gi|28557621|gb|AAO45216.1| RE27227p [Drosophila melanogaster]          60   1e-07
gi|50797652|ref|XP_423964.1| PREDICTED: similar to RIKEN cDNA 24...    60   1e-07
gi|11863163|ref|NP_071505.1| TIA1 protein isoform 2; TIA1 cytoto...    60   1e-07
gi|19114796|ref|NP_593884.1| putative cleavage or polyadenylatio...    60   1e-07
gi|17137710|ref|NP_477453.1| CG7697-PA [Drosophila melanogaster]...    60   1e-07
gi|1809248|gb|AAB41656.1| siah binding protein 1 [Homo sapiens]        60   1e-07
gi|5524727|gb|AAD44358.1| RNA-binding protein SiahBP [Rattus nor...    60   1e-07
gi|6176532|gb|AAF05605.1| poly-U binding splicing factor PUF60 [...    60   1e-07
gi|17978512|ref|NP_510965.1| fuse-binding protein-interacting re...    60   1e-07
gi|34866841|ref|XP_343269.1| siah binding protein 1; FBP interac...    60   1e-07
gi|48098445|ref|XP_392063.1| similar to ENSANGP00000016235 [Apis...    60   1e-07
gi|15030041|gb|AAH11265.1| SIAHBP1 protein [Homo sapiens] >gnl|B...    60   1e-07
gi|16307289|gb|AAH09734.1| SIAHBP1 protein [Homo sapiens]              60   1e-07
gi|19526862|ref|NP_598452.1| RIKEN cDNA 2410104I19 [Mus musculus...    60   1e-07
gi|17298690|ref|NP_055096.2| fuse-binding protein-interacting re...    60   1e-07
gi|47223170|emb|CAG11305.1| unnamed protein product [Tetraodon n...    60   2e-07
gi|16198525|gb|AAH15944.1| TIA1 protein [Homo sapiens]                 60   2e-07
gi|6755783|ref|NP_035715.1| cytotoxic granule-associated RNA bin...    60   2e-07
gi|15217573|ref|NP_177322.1| polyadenylate-binding protein 5 (PA...    59   2e-07
gi|166786|gb|AAA32832.1| poly(A)-binding protein                       59   2e-07
gi|6325369|ref|NP_015437.1| Essential conserved protein that ass...    59   2e-07
gi|31074960|gb|AAP42138.1| RNA-binding protein UBP-2 [Trypanosom...    59   4e-07
gi|48102436|ref|XP_395357.1| similar to TIA-1 homologue [Apis me...    59   4e-07
gi|173421|gb|AAA35320.1| poly(A)-binding protein                       59   4e-07
gi|19115334|ref|NP_594422.1| putative splicing factor [Schizosac...    58   5e-07
gi|47226485|emb|CAG08501.1| unnamed protein product [Tetraodon n...    58   7e-07
gi|26328597|dbj|BAC28037.1| unnamed protein product [Mus musculus]     58   7e-07
gi|18875338|ref|NP_573459.1| cleavage stimulation factor, 3' pre...    58   7e-07
gi|22478042|gb|AAH36719.1| Unknown (protein for MGC:36412) [Mus ...    58   7e-07
gi|421829|pir||S33706 DNA-damage repair protein DRT111 precursor...    58   7e-07
gi|19114289|ref|NP_593377.1| polyadenylate-binding protein [Schi...    57   9e-07
gi|15220757|ref|NP_174336.1| DNA-damage-repair/toleration protei...    57   9e-07
gi|50286493|ref|XP_445675.1| unnamed protein product [Candida gl...    57   9e-07
gi|27817319|emb|CAD61098.1| SI:zC12P8.2.2 (novel protein similar...    57   9e-07
gi|27817320|emb|CAD61099.1| SI:zC12P8.2.1 (novel protein similar...    57   9e-07
gi|50344898|ref|NP_001002121.1| zgc:86806 [Danio rerio] >gnl|BL_...    57   9e-07
gi|39598264|emb|CAE68956.1| Hypothetical protein CBG14936 [Caeno...    57   9e-07
gi|21667634|gb|AAM74138.1| U-rich RNA-binding protein UBP-2 [Try...    57   1e-06
gi|45187908|ref|NP_984131.1| ADR035Cp [Eremothecium gossypii] >g...    57   1e-06
gi|50546647|ref|XP_500793.1| hypothetical protein [Yarrowia lipo...    57   1e-06
gi|31209465|ref|XP_313699.1| ENSANGP00000003770 [Anopheles gambi...    57   1e-06
gi|41055734|ref|NP_956476.1| TIA1 cytotoxic granule-associated R...    57   2e-06
gi|47221195|emb|CAG05516.1| unnamed protein product [Tetraodon n...    57   2e-06
gi|37681959|gb|AAQ97857.1| TIA1 cytotoxic granule-associated RNA...    56   2e-06
gi|2961399|emb|CAA18091.1| EG:65F1.2 [Drosophila melanogaster]         56   2e-06
gi|2134155|pir||I51678 ribonucleoprotein - African clawed frog >...    56   2e-06
gi|18079265|ref|NP_525033.1| CG4262-PA [Drosophila melanogaster]...    56   2e-06
gi|6321013|ref|NP_011092.1| Poly(A) binding protein, cytoplasmic...    56   2e-06
gi|172092|gb|AAA34838.1| polyadenylate-binding protein                 56   2e-06
gi|18402769|ref|NP_564554.1| polyadenylate-binding protein, puta...    56   2e-06
gi|45382273|ref|NP_990161.1| RNA-binding protein HuD [Gallus gal...    56   2e-06
gi|28059803|gb|AAO30095.1| splicing factor-like protein [Arabido...    56   2e-06
gi|18416114|ref|NP_568220.1| RNA recognition motif (RRM)-contain...    56   2e-06
gi|9294614|dbj|BAB02953.1| DNA/RNA binding protein-like [Arabido...    56   3e-06
gi|2500581|sp|O09032|ELV4_RAT ELAV-like protein 4 (Paraneoplasti...    56   3e-06
gi|3850819|emb|CAA77134.1| U2 snRNP auxiliary factor, small subu...    56   3e-06
gi|26347767|dbj|BAC37532.1| unnamed protein product [Mus musculus]     56   3e-06
gi|14280323|gb|AAK57538.1| HUD3 [Homo sapiens]                         56   3e-06
gi|14280327|gb|AAK57540.1| HUD1 [Homo sapiens]                         56   3e-06
gi|11386163|ref|NP_068771.1| ELAV (embryonic lethal, abnormal vi...    56   3e-06
gi|23271926|gb|AAH36071.1| ELAVL4 protein [Homo sapiens]               56   3e-06
gi|21618243|gb|AAM67293.1| nuclear acid binding protein, putativ...    56   3e-06
gi|2500580|sp|Q61701|ELV4_MOUSE ELAV-like protein 4 (Paraneoplas...    56   3e-06
gi|28879001|gb|AAH48159.1| Elavl4 protein [Mus musculus]               56   3e-06
gi|3850818|emb|CAA77133.1| U2 snRNP auxiliary factor, small subu...    56   3e-06
gi|12851808|dbj|BAB29173.1| unnamed protein product [Mus musculus]     56   3e-06
gi|14280325|gb|AAK57539.1| HUD4 [Homo sapiens]                         56   3e-06
gi|15230291|ref|NP_188544.1| RNA-binding protein, putative [Arab...    56   3e-06
gi|6754266|ref|NP_034618.1| ELAV (embryonic lethal, abnormal vis...    56   3e-06
gi|50254618|gb|EAL17367.1| hypothetical protein CNBN1910 [Crypto...    55   3e-06
gi|21619877|gb|AAH33135.1| Similar to cleavage stimulation facto...    55   3e-06
gi|7439967|pir||T06979 polyadenylate-binding protein - wheat >gn...    55   3e-06
gi|34913374|ref|NP_918034.1| putative DNA damage repair protein ...    55   3e-06
gi|34810648|pdb|1P1T|A Chain A, Nmr Structure Of The N-Terminal ...    55   3e-06
gi|50745788|ref|XP_420243.1| PREDICTED: similar to CstF-64 [Gall...    55   3e-06
gi|50732058|ref|XP_425950.1| PREDICTED: similar to RIKEN cDNA 24...    55   3e-06
gi|27735464|gb|AAH41291.1| Cstf-64-prov protein [Xenopus laevis]       55   3e-06
gi|4557493|ref|NP_001316.1| cleavage stimulation factor subunit ...    55   3e-06
gi|27807239|ref|NP_777110.1| cleavage stimulation factor, 3' pre...    55   3e-06
gi|632500|gb|AAB50269.1| polyadenylation factor 64 kDa subunit         55   3e-06
gi|9758966|dbj|BAB09409.1| splicing factor-like protein [Arabido...    55   4e-06
gi|28830074|gb|AAO52564.1| similar to Plasmodium falciparum. Hyp...    55   4e-06
gi|48102818|ref|XP_395436.1| similar to ENSANGP00000011474 [Apis...    55   4e-06
gi|25411757|pir||B84546 probable splicing factor [imported] - Ar...    55   4e-06
gi|50725435|dbj|BAD32907.1| putative polyadenylate-binding prote...    55   6e-06
gi|15227815|ref|NP_179916.1| polyadenylate-binding protein, puta...    55   6e-06
gi|17432522|gb|AAL39067.1| single-stranded DNA binding protein p...    55   6e-06
gi|13430610|gb|AAK25927.1| putative poly(A) binding protein [Ara...    55   6e-06
gi|50285445|ref|XP_445151.1| unnamed protein product [Candida gl...    54   7e-06
gi|18858615|ref|NP_571524.1| ELAV-like protein 3; elav/huc homol...    54   7e-06
gi|7528270|gb|AAF63202.1| poly(A)-binding protein [Cucumis sativus]    54   7e-06
gi|2134153|pir||I51676 ribonucleoprotein - African clawed frog >...    54   7e-06
gi|38345802|emb|CAE03574.2| OSJNBa0085I10.19 [Oryza sativa (japo...    54   7e-06
gi|29841435|gb|AAP06467.1| similar to GenBank Accession Number A...    54   7e-06
gi|24119253|ref|NP_705947.1| splicing factor 3b, subunit 4; spli...    54   7e-06
gi|46105484|ref|XP_380546.1| hypothetical protein FG00370.1 [Gib...    54   7e-06
gi|12230584|sp|Q08935|ROC1_NICSY 29 kDa ribonucleoprotein A, chl...    54   7e-06
gi|28279908|gb|AAH44184.1| Elavl1 protein [Danio rerio]                54   7e-06
gi|17944383|gb|AAL48083.1| RE71384p [Drosophila melanogaster]          54   1e-05
gi|24649519|ref|NP_732945.1| CG5422-PD [Drosophila melanogaster]...    54   1e-05
gi|10039331|dbj|BAB13308.1| vasa-related protein CnVAS2 [Hydra m...    54   1e-05
gi|17136378|ref|NP_476667.1| CG5119-PA [Drosophila melanogaster]...    54   1e-05
gi|24649513|ref|NP_732942.1| CG5422-PB [Drosophila melanogaster]...    54   1e-05
gi|7767194|pdb|1D8Z|A Chain A, Solution Structure Of The First R...    54   1e-05
gi|45201105|ref|NP_986675.1| AGR010Cp [Eremothecium gossypii] >g...    54   1e-05
gi|49402291|ref|NP_956398.1| heterogeneous nuclear ribonucleopro...    54   1e-05
gi|33356910|pdb|1FNX|H Chain H, Solution Structure Of The Huc Rb...    54   1e-05
gi|41944855|gb|AAH65965.1| Elavl4 protein [Danio rerio]                54   1e-05
gi|8778468|gb|AAF79476.1| F1L3.34 [Arabidopsis thaliana]               54   1e-05
gi|50306049|ref|XP_452986.1| unnamed protein product [Kluyveromy...    54   1e-05
gi|19705459|ref|NP_599180.1| poly(A) binding protein, cytoplasmi...    54   1e-05
gi|31560656|ref|NP_032800.2| poly A binding protein, cytoplasmic...    54   1e-05
gi|18201888|ref|NP_543022.1| poly(A) binding protein, cytoplasmi...    54   1e-05
gi|50400917|sp|Q7JGR2|PAB5_MACMU Polyadenylate-binding protein 5...    54   1e-05
gi|12274833|emb|CAC22160.1| bA31K16.2 (ELAV (embryonic lethal, a...    54   1e-05
gi|4758262|ref|NP_004423.1| ELAV (embryonic lethal, abnormal vis...    54   1e-05
gi|49355765|ref|NP_115657.2| ELAV-like protein 3 isoform 2; Hu a...    54   1e-05
gi|542846|pir||JC2116 hippocampal 38K autoantigen protein - huma...    54   1e-05
gi|50543092|ref|XP_499712.1| hypothetical protein [Yarrowia lipo...    54   1e-05
gi|21265137|gb|AAH30692.1| ELAVL2 protein [Homo sapiens]               54   1e-05
gi|2136127|pir||I39077 RNA-binding protein Hel-N2 - human >gnl|B...    54   1e-05
gi|49355761|ref|NP_001411.2| ELAV-like protein 3 isoform 1; Hu a...    54   1e-05
gi|7512684|pir||T34543 hypothetical protein DKFZp434O1221.1 - hu...    54   1e-05
gi|18858617|ref|NP_571528.1| ELAV (embryonic lethal, abnormal vi...    54   1e-05
gi|27229298|ref|NP_758827.1| ELAV-like protein 3 [Rattus norvegi...    54   1e-05
gi|47847880|dbj|BAD21673.1| putative RNA-binding protein RNP1 pr...    53   2e-05
gi|46592818|ref|NP_997568.1| ELAV-like 2 isoform 1; HU-antigen; ...    53   2e-05
gi|45188003|ref|NP_984226.1| ADR130Wp [Eremothecium gossypii] >g...    53   2e-05
gi|45360881|ref|NP_989116.1| Spx-prov protein [Xenopus tropicali...    53   2e-05
gi|49085942|ref|XP_405054.1| hypothetical protein AN0917.2 [Aspe...    53   2e-05
gi|728726|emb|CAA59430.1| Xel-1 [Xenopus laevis]                       53   2e-05
gi|23346437|ref|NP_694693.1| splicing factor 3b, subunit 4; spli...    53   2e-05
gi|5032069|ref|NP_005841.1| splicing factor 3b, subunit 4; splic...    53   2e-05
gi|15020254|gb|AAK74152.1| ELAV-like neuronal protein-3 [Mus mus...    53   2e-05
gi|2134154|pir||I51677 ribonucleoprotein - African clawed frog >...    53   2e-05
gi|129535|sp|P29341|PAB1_MOUSE Polyadenylate-binding protein 1 (...    53   2e-05
gi|13898849|gb|AAK48899.1| ribonucleoprotein [Labeo rohita]            53   2e-05
gi|47220048|emb|CAG12196.1| unnamed protein product [Tetraodon n...    53   2e-05
gi|19032262|emb|CAD18922.1| RNA-binding protein precursor [Perse...    53   2e-05
gi|34858075|ref|XP_238245.2| similar to Sf3b4 protein [Rattus no...    53   2e-05
gi|34913270|ref|NP_917982.1| putative 29 kDa ribonucleoprotein A...    53   2e-05
gi|50794775|ref|XP_423721.1| PREDICTED: similar to Splicing fact...    53   2e-05
gi|46592826|ref|NP_997569.1| ELAV-like 2 isoform 3; HU-antigen; ...    53   2e-05
gi|47225636|emb|CAG07979.1| unnamed protein product [Tetraodon n...    53   2e-05
gi|15020256|gb|AAK74153.1| ELAV-like neuronal protein-2 [Mus mus...    53   2e-05
gi|34193906|gb|AAH56532.1| Splicing factor 3b, subunit 4 [Danio ...    53   2e-05
gi|6754264|ref|NP_034616.1| ELAV-like 2 isoform 2; HU-antigen; H...    53   2e-05
gi|34869592|ref|XP_346744.1| hypothetical protein XP_346743 [Rat...    53   2e-05
gi|40807107|gb|AAH65343.1| Elavl3 protein [Danio rerio]                53   2e-05
gi|48094614|ref|XP_394225.1| similar to squamous cell carcinoma ...    53   2e-05
gi|47220951|emb|CAG03484.1| unnamed protein product [Tetraodon n...    53   2e-05
gi|46227101|gb|EAK88051.1| T8M16_190-plant like protein with RRM...    53   2e-05
gi|18858613|ref|NP_571527.1| ELAV (embryonic lethal, abnormal vi...    53   2e-05
gi|18463972|gb|AAL73053.1| HUC [Sphoeroides nephelus]                  53   2e-05
gi|50310969|ref|XP_455507.1| unnamed protein product [Kluyveromy...    53   2e-05
gi|14029147|gb|AAK51123.1| polyadenylated mRNA-binding protein 2...    53   2e-05
gi|14091677|gb|AAK53819.1| RNA-binding protein UBP1 [Trypanosoma...    53   2e-05
gi|26351239|dbj|BAC39256.1| unnamed protein product [Mus musculus]     53   2e-05
gi|4507499|ref|NP_003243.1| TIA1 cytotoxic granule-associated RN...    53   2e-05
gi|14714709|gb|AAH10496.1| Tial1 protein [Mus musculus]                53   2e-05
gi|26330250|dbj|BAC28855.1| unnamed protein product [Mus musculu...    53   2e-05
gi|26341156|dbj|BAC34240.1| unnamed protein product [Mus musculus]     53   2e-05
gi|17510027|ref|NP_491177.1| poly U binding factor 68kD like (rn...    53   2e-05
gi|48123509|ref|XP_393252.1| similar to SD14970p [Apis mellifera]      53   2e-05
gi|20072518|gb|AAH26995.1| Cstf2t-pending protein [Mus musculus]       53   2e-05
gi|6321394|ref|NP_011471.1| Cleavage and polyadenylation factor ...    53   2e-05
gi|49098356|ref|XP_410638.1| hypothetical protein AN6501.2 [Aspe...    53   2e-05
gi|34856361|ref|XP_232139.2| similar to Tia1 protein [Rattus nor...    53   2e-05
gi|39587756|emb|CAE67774.1| Hypothetical protein CBG13349 [Caeno...    53   2e-05
gi|20380061|gb|AAH28239.1| Cleavage stimulation factor, 3' pre-R...    53   2e-05
gi|14149675|ref|NP_056050.1| cleavage stimulation factor, 3' pre...    53   2e-05
gi|22329932|ref|NP_174676.2| polyadenylate-binding protein, puta...    53   2e-05
gi|14571652|emb|CAC42812.1| Poly(A)-binding protein cytoplasmic ...    53   2e-05
gi|13752575|ref|NP_112539.1| cleavage stimulation factor, 3' pre...    53   2e-05
gi|34862808|ref|XP_219809.2| similar to Cstf2t-pending protein [...    53   2e-05
gi|7446359|pir||T05727 nucleic acid-binding protein - barley >gn...    53   2e-05
gi|50510589|dbj|BAD32280.1| mKIAA0689 protein [Mus musculus]           53   2e-05
gi|15231200|ref|NP_190806.1| 33 kDa ribonucleoprotein, chloropla...    53   2e-05
gi|681912|dbj|BAA06523.1| cp33 [Arabidopsis thaliana]                  53   2e-05
gi|17064758|gb|AAL32533.1| ubiquitin / ribosomal protein CEP52 [...    53   2e-05
gi|25141353|ref|NP_740829.1| poly U binding factor 68kD like (rn...    53   2e-05
gi|17510025|ref|NP_491176.1| poly U binding factor 68kD like (rn...    53   2e-05
gi|1082703|pir||S52491 polyadenylate binding protein II - human ...    52   3e-05
gi|39580770|emb|CAE58939.1| Hypothetical protein CBG02207 [Caeno...    52   3e-05
gi|18376336|emb|CAD21082.1| RNA splicing factor Pad-1 [Neurospor...    52   3e-05
gi|47225344|emb|CAG09844.1| unnamed protein product [Tetraodon n...    52   3e-05
gi|41386798|ref|NP_776993.1| poly(A) binding protein, cytoplasmi...    52   3e-05
gi|26354649|dbj|BAC40951.1| unnamed protein product [Mus musculus]     52   3e-05
gi|32404272|ref|XP_322749.1| hypothetical protein ( (AF130355) P...    52   3e-05
gi|15021899|dbj|BAB62225.1| Hu/elav class neuron-specific RNA bi...    52   3e-05
gi|7489196|pir||T01932 RNA binding protein homolog - common toba...    52   3e-05
gi|7489112|pir||T03934 DNA binding protein ACBF - common tobacco...    52   3e-05
gi|4530579|gb|AAD22102.1| Pad-1 [Neurospora crassa]                    52   3e-05
gi|47217896|emb|CAG05018.1| unnamed protein product [Tetraodon n...    52   3e-05
gi|38344339|emb|CAD41755.2| OSJNBa0058K23.21 [Oryza sativa (japo...    52   3e-05
gi|34860763|ref|XP_230831.2| similar to embryonic poly(A) bindin...    52   3e-05
gi|15237311|ref|NP_197130.1| RNA recognition motif (RRM)-contain...    52   4e-05
gi|47219575|emb|CAG02281.1| unnamed protein product [Tetraodon n...    52   4e-05
gi|104063|pir||B34840 heterogeneous ribonuclear particle protein...    52   4e-05
gi|47222165|emb|CAG11591.1| unnamed protein product [Tetraodon n...    52   4e-05
gi|11863161|ref|NP_071320.1| TIA1 protein isoform 1; TIA1 cytoto...    52   4e-05
gi|34872835|ref|XP_222279.2| similar to tumor-rejection antigen ...    52   4e-05
gi|133258|sp|P17130|ROA1_XENLA Heterogeneous nuclear ribonucleop...    52   4e-05
gi|24645384|ref|NP_649899.1| CG9373-PA [Drosophila melanogaster]...    52   4e-05
gi|47938744|gb|AAH72090.1| LOC397751 protein [Xenopus laevis]          52   4e-05
gi|27497553|gb|AAO13018.1| RNA-binding protein HU [Oncorhynchus ...    52   4e-05
gi|15240641|ref|NP_199836.1| 31 kDa ribonucleoprotein, chloropla...    52   4e-05
gi|21429908|gb|AAM50632.1| GH11495p [Drosophila melanogaster]          52   4e-05
gi|15223293|ref|NP_171616.1| 33 kDa ribonucleoprotein, chloropla...    52   4e-05
gi|40804404|gb|AAR91698.1| DNA-binding protein [Lycopersicon esc...    52   4e-05
gi|28374170|gb|AAH45264.1| Spx-prov protein [Xenopus laevis]           52   4e-05
gi|39596513|emb|CAE63132.1| Hypothetical protein CBG07431 [Caeno...    52   4e-05
gi|50604232|gb|AAH77458.1| Unknown (protein for MGC:82420) [Xeno...    52   4e-05
gi|13435438|gb|AAH04587.1| Pabpc1 protein [Mus musculus]               52   4e-05
gi|15220810|ref|NP_173208.1| RNA recognition motif (RRM)-contain...    52   4e-05
gi|50419577|ref|XP_458315.1| unnamed protein product [Debaryomyc...    52   5e-05
gi|418855|pir||S30887 polyadenylate-binding protein - fruit fly ...    52   5e-05
gi|1710624|sp|P51990|RO22_XENLA Heterogeneous nuclear ribonucleo...    52   5e-05
gi|50312449|ref|XP_456258.1| unnamed protein product [Kluyveromy...    52   5e-05
gi|7661952|ref|NP_055521.1| squamous cell carcinoma antigen reco...    52   5e-05
gi|585638|sp|P21187|PABP_DROME Polyadenylate-binding protein (Po...    52   5e-05
gi|15242719|ref|NP_198865.1| RNA recognition motif (RRM)-contain...    52   5e-05
gi|17567133|ref|NP_510260.1| PolyA Binding protein (76.0 kD) (pa...    52   5e-05
gi|49071344|ref|XP_399961.1| hypothetical protein UM02346.1 [Ust...    52   5e-05
gi|32422733|ref|XP_331810.1| hypothetical protein [Neurospora cr...    52   5e-05
gi|42407939|dbj|BAD09078.1| putative nucleic acid-binding protei...    52   5e-05
gi|47086779|ref|NP_997793.1| TIA1 cytotoxic granule-associated R...    52   5e-05
gi|14585790|gb|AAK67714.1| HUC [Homo sapiens]                          52   5e-05
gi|431093|gb|AAA58677.1| huc                                           52   5e-05
gi|17540798|ref|NP_502198.1| splicing factor (41.2 kD) (4M403) [...    52   5e-05
gi|41107668|gb|AAH65442.1| Zgc:77730 protein [Danio rerio]             52   5e-05
gi|17567131|ref|NP_510259.1| PolyA Binding protein (pab-2) [Caen...    52   5e-05
gi|50258729|gb|EAL21414.1| hypothetical protein CNBD1090 [Crypto...    52   5e-05
gi|23271442|gb|AAH23813.1| Tia1 protein [Mus musculus]                 52   5e-05
gi|38541222|gb|AAH62832.1| Unknown (protein for IMAGE:6997127) [...    51   6e-05
gi|13096978|gb|AAH03283.1| Poly(A) binding protein, cytoplasmic ...    51   6e-05
gi|38109743|gb|EAA55566.1| hypothetical protein MG01217.4 [Magna...    51   6e-05
gi|31209491|ref|XP_313712.1| ENSANGP00000017004 [Anopheles gambi...    51   6e-05
gi|9663769|emb|CAC01238.1| RNA Binding Protein 47 [Nicotiana plu...    51   6e-05
gi|28386187|gb|AAH46812.1| Tia1 protein [Mus musculus]                 51   6e-05
gi|48106130|ref|XP_396057.1| similar to ENSANGP00000022280 [Apis...    51   6e-05
gi|50307487|ref|XP_453723.1| unnamed protein product [Kluyveromy...    51   6e-05
gi|39593790|emb|CAE62083.1| Hypothetical protein CBG06106 [Caeno...    51   6e-05
gi|7446357|pir||T06817 RNA-binding protein - garden pea >gnl|BL_...    51   6e-05
gi|27924240|gb|AAH45086.1| Tia1 protein [Xenopus laevis]               51   6e-05
gi|1710623|sp|P51989|RO21_XENLA Heterogeneous nuclear ribonucleo...    51   6e-05
gi|28302301|gb|AAH46692.1| Hnrpa2b1-prov protein [Xenopus laevis]      51   6e-05
gi|34365067|emb|CAE45890.1| hypothetical protein [Homo sapiens]        51   6e-05
gi|32189747|ref|NP_859477.1| RNA binding protein, putative [Leis...    51   6e-05
gi|37534740|ref|NP_921672.1| putative splicing factor-like prote...    51   6e-05
gi|22507391|ref|NP_683717.1| poly(A) binding protein, cytoplasmi...    51   8e-05
gi|19526272|gb|AAL89666.1| polyA-binding protein [Takifugu rubri...    51   8e-05
gi|50729326|ref|XP_416473.1| PREDICTED: similar to 45kDa splicin...    51   8e-05
gi|34419622|ref|NP_570951.2| poly(A) binding protein, cytoplasmi...    51   8e-05
gi|31205973|ref|XP_311938.1| ENSANGP00000011011 [Anopheles gambi...    51   8e-05
gi|22779924|ref|NP_690037.1| RNA binding motif protein 17 [Mus m...    51   8e-05
gi|40253662|dbj|BAD05605.1| putative nucleolin [Oryza sativa (ja...    51   8e-05
gi|31242473|ref|XP_321667.1| ENSANGP00000011474 [Anopheles gambi...    51   8e-05
gi|50758995|ref|XP_425690.1| PREDICTED: similar to RNA-binding r...    51   8e-05
gi|41054740|ref|NP_957426.1| similar to TIA1 cytotoxic granule-a...    51   8e-05
gi|50345000|ref|NP_001002172.1| zgc:91918 [Danio rerio] >gnl|BL_...    51   8e-05
gi|4757926|ref|NP_004893.1| RNA-binding region containing protei...    51   8e-05
gi|27545382|ref|NP_775431.1| RNA binding protein HuB [Rattus nor...    51   8e-05
gi|47228429|emb|CAG05249.1| unnamed protein product [Tetraodon n...    51   8e-05
gi|14249678|ref|NP_116294.1| RNA binding motif protein 17; splic...    51   8e-05
gi|35493822|ref|NP_909129.1| RNA-binding region containing prote...    51   8e-05
gi|14290573|gb|AAH09064.1| RBM17 protein [Homo sapiens]                51   8e-05
gi|35493811|ref|NP_909122.1| RNA-binding region containing prote...    51   8e-05
gi|31873732|emb|CAD97833.1| hypothetical protein [Homo sapiens]        51   8e-05
gi|35493817|ref|NP_909125.1| RNA-binding region containing prote...    51   8e-05
gi|13278367|gb|AAH04000.1| Rnpc2 protein [Mus musculus]                51   8e-05
gi|12053297|emb|CAB66834.1| hypothetical protein [Homo sapiens]        50   1e-04
gi|45383446|ref|NP_989687.1| TIA1 cytotoxic granule-associated R...    50   1e-04
gi|38078078|ref|XP_124207.2| similar to Poly(A) binding protein,...    50   1e-04
gi|41053419|ref|NP_956615.1| hypothetical protein MGC56258 [Dani...    50   1e-04
gi|13812116|ref|NP_113243.1| polyadenylate-binding protein [Guil...    50   1e-04
gi|47219550|emb|CAG09904.1| unnamed protein product [Tetraodon n...    50   1e-04
gi|7446360|pir||T09108 RNA binding protein, 24K, chloroplast - s...    50   1e-04
gi|29654256|ref|NP_819948.1| RNA-binding protein [Coxiella burne...    50   1e-04
gi|14334958|gb|AAK59656.1| putative spliceosome associated prote...    50   1e-04
gi|42658041|ref|XP_208373.4| similar to Heterogeneous nuclear ri...    50   1e-04
gi|49523277|gb|AAH75485.1| Unknown (protein for MGC:89320) [Xeno...    50   1e-04
gi|27882534|gb|AAH44487.1| Rnpc2 protein [Danio rerio]                 50   1e-04
gi|18412143|ref|NP_567249.1| RNA-binding protein, putative [Arab...    50   1e-04
gi|30923530|gb|EAA46008.1| CG17540-PA.3 [Drosophila melanogaster]      50   1e-04
gi|19112391|ref|NP_595599.1| RNA binding protein; 5 rrm RNA reco...    50   1e-04
gi|7488303|pir||T01382 ribonucleoprotein homolog T4I9.1 - Arabid...    50   1e-04
gi|6678349|ref|NP_033409.1| Tial1 cytotoxic granule-associated R...    50   1e-04
gi|15226983|ref|NP_181084.1| 33 kDa ribonucleoprotein, chloropla...    50   1e-04
gi|23619530|ref|NP_705492.1| polyadenylate binding protein, puta...    50   1e-04
gi|17946228|gb|AAL49154.1| RE57542p [Drosophila melanogaster]          50   1e-04
gi|9930616|gb|AAG02117.1| poly(A) binding protein [Arabidopsis t...    50   1e-04
gi|15219945|ref|NP_173690.1| polyadenylate-binding protein 3 (PA...    50   1e-04
gi|46227640|gb|EAK88575.1| cleavage stimulation factor subunit 2...    50   1e-04
gi|46409234|gb|AAS93774.1| AT25717p [Drosophila melanogaster]          50   1e-04
gi|30923532|gb|EAA46010.1| CG17540-PB.3 [Drosophila melanogaster]      50   1e-04
gi|7417424|gb|AAF62554.1| nucleolin [Oncorhynchus mykiss]              50   1e-04
gi|30679366|ref|NP_849294.1| RNA-binding protein, putative [Arab...    50   1e-04
gi|30923531|gb|EAA46009.1| CG17540-PC.3 [Drosophila melanogaster...    50   1e-04
gi|7439965|pir||T00768 polyadenylate-binding protein T22J18.7 - ...    50   1e-04
gi|45680441|gb|AAS75242.1| 'contains similar to RNA recognition ...    50   1e-04
gi|119265|sp|P23241|ELAV_DROVI Elav protein (Embryonic lethal ab...    50   2e-04
gi|103516|pir||A40252 elav protein - fruit fly (Drosophila virilis)    50   2e-04
gi|49903495|gb|AAH76931.1| Unknown (protein for MGC:89198) [Xeno...    50   2e-04
gi|22330574|ref|NP_177325.2| cleavage stimulation factor, putati...    50   2e-04
gi|21591633|gb|AAM64164.1| cleavage stimulation factor 64 [Arabi...    50   2e-04
gi|49658982|emb|CAE01482.1| HUR [Tetraodon nigroviridis]               50   2e-04
gi|46227309|gb|EAK88259.1| musashi.  RRM domain containing prote...    50   2e-04
gi|48734702|gb|AAH71591.1| PABPC4 protein [Homo sapiens]               50   2e-04
gi|23481012|gb|EAA17420.1| polyA binding protein-related [Plasmo...    50   2e-04
gi|34870953|ref|XP_216517.2| similar to poly(A)-binding protein,...    50   2e-04
gi|19032260|emb|CAD18921.1| RNA-binding protein precursor [Perse...    50   2e-04
gi|41152034|ref|NP_958453.1| poly(A) binding protein, cytoplasmi...    50   2e-04
gi|998355|gb|AAA76605.1| colony 1                                      50   2e-04
gi|21593441|gb|AAM65408.1| putative spliceosome associated prote...    50   2e-04
gi|15224186|ref|NP_179441.1| pre-mRNA splicing factor, putative ...    50   2e-04
gi|38345560|emb|CAE03434.2| OSJNBa0032F06.17 [Oryza sativa (japo...    50   2e-04
gi|27753638|gb|AAO22167.1| bruno-like 4 protein [Mus musculus]         50   2e-04
gi|100903|pir||S23780 nucleic acid-binding protein - maize >gnl|...    50   2e-04
gi|543010|pir||S41768 splicing factor homolog - human >gnl|BL_OR...    50   2e-04
gi|4504715|ref|NP_003810.1| poly A binding protein, cytoplasmic ...    50   2e-04
gi|39592368|emb|CAE63445.1| Hypothetical protein CBG07904 [Caeno...    50   2e-04
gi|133249|sp|P19684|ROC5_NICSY 33 kDa ribonucleoprotein, chlorop...    50   2e-04
gi|480602|pir||S37085 polyadenylate-binding protein - fern (Anem...    50   2e-04
gi|28883273|gb|AAO49720.1| TIA-1 [Gallus gallus]                       50   2e-04
gi|18875412|ref|NP_573505.1| RNA-binding region containing prote...    50   2e-04
gi|38566951|emb|CAE76253.1| related to heterogeneous nuclear rib...    49   2e-04
gi|45549052|ref|NP_476936.2| CG3151-PD [Drosophila melanogaster]...    49   2e-04
gi|45549053|ref|NP_476937.2| CG3151-PA [Drosophila melanogaster]...    49   2e-04
gi|7496180|pir||T19347 hypothetical protein C17D12.2 - Caenorhab...    49   2e-04
gi|28175300|gb|AAH45128.1| Efna2-prov protein [Xenopus laevis]         49   2e-04
gi|33469616|gb|AAQ19851.1| putative RNA-binding protein [Caenorh...    49   2e-04
gi|50511477|gb|AAT77399.1| 'U2 snRNP auxiliary factor, small sub...    49   2e-04
gi|3850816|emb|CAA77132.1| U2 snRNP auxiliary factor, small subu...    49   2e-04
gi|25141355|ref|NP_492958.2| RNA binding protein bruno-like (1M1...    49   2e-04
gi|28374304|gb|AAH45260.1| Hnrpa1-prov protein [Xenopus laevis]        49   2e-04
gi|6273351|gb|AAF06330.1| vitamin D response element binding pro...    49   2e-04
gi|32419407|ref|XP_330147.1| hypothetical protein [Neurospora cr...    49   2e-04
gi|50428185|ref|XP_459242.1| unnamed protein product [Debaryomyc...    49   2e-04
gi|7446358|pir||T05725 cp31AHv protein - barley >gnl|BL_ORD_ID|1...    49   2e-04
gi|9246977|gb|AAF86232.1| RNA-binding protein BRUNOL4 [Homo sapi...    49   2e-04
gi|7322081|gb|AAB25519.2| RRM9 [Drosophila melanogaster]               49   2e-04
gi|19549688|ref|NP_599124.1| CG3151-PB [Drosophila melanogaster]...    49   2e-04
gi|19549690|ref|NP_599125.1| CG3151-PE [Drosophila melanogaster]...    49   2e-04
gi|38078076|ref|XP_355472.1| similar to Poly(A) binding protein,...    49   2e-04
gi|47218242|emb|CAF96279.1| unnamed protein product [Tetraodon n...    49   2e-04
gi|28279033|gb|AAH45711.1| BRUNOL4 protein [Homo sapiens]              49   2e-04
gi|45238849|ref|NP_112241.2| poly(A) binding protein, cytoplasmi...    49   3e-04
gi|11610605|gb|AAG38953.1| testis-specific poly(A)-binding prote...    49   3e-04
gi|50426851|ref|XP_462023.1| unnamed protein product [Debaryomyc...    49   3e-04
gi|46806500|dbj|BAD17624.1| putative heterogeneous nuclearribonu...    49   3e-04
gi|46806499|dbj|BAD17623.1| putative heterogeneous nuclearribonu...    49   3e-04
gi|15228191|ref|NP_188259.1| polyadenylate-binding protein, puta...    49   3e-04
gi|39583263|emb|CAE60055.1| Hypothetical protein CBG03568 [Caeno...    49   3e-04
gi|780291|gb|AAA65224.1| polyadenylate-binding protein                 49   3e-04
gi|17510879|ref|NP_492727.1| polyadenylate-binding protein, Poly...    49   3e-04
gi|7446356|pir||T06232 Ps16 protein - wheat >gnl|BL_ORD_ID|15835...    49   3e-04
gi|32407122|ref|XP_324156.1| hypothetical protein [Neurospora cr...    49   3e-04
gi|47226530|emb|CAG08546.1| unnamed protein product [Tetraodon n...    49   3e-04
gi|18858877|ref|NP_570984.1| HuG; etID19626.11 [Danio rerio] >gn...    49   3e-04
gi|7446342|pir||S77714 RNA-binding protein precursor, 33K - wood...    49   3e-04
gi|41388837|gb|AAH65540.1| PABPC4 protein [Homo sapiens]               49   4e-04
gi|39580421|emb|CAE69303.1| Hypothetical protein CBG15358 [Caeno...    49   4e-04
gi|87650|pir||S02061 heterogeneous ribonuclear particle protein ...    49   4e-04
gi|50289655|ref|XP_447259.1| unnamed protein product [Candida gl...    49   4e-04
gi|45382281|ref|NP_990163.1| RNA-binding protein HuC [Gallus gal...    49   4e-04
gi|32490269|emb|CAE05558.1| OSJNBb0116K07.11 [Oryza sativa (japo...    49   4e-04
gi|41151222|ref|XP_114158.3| similar to Polyadenylate-binding pr...    49   4e-04
gi|29841314|gb|AAP06346.1| similar to myelin gene expression fac...    49   4e-04
gi|31241499|ref|XP_321180.1| ENSANGP00000020835 [Anopheles gambi...    49   4e-04
gi|47213373|emb|CAF90992.1| unnamed protein product [Tetraodon n...    49   4e-04
gi|50553138|ref|XP_503979.1| hypothetical protein [Yarrowia lipo...    49   4e-04
gi|50801542|ref|XP_428547.1| PREDICTED: similar to Polyadenylate...    49   4e-04
gi|50425585|ref|XP_461388.1| unnamed protein product [Debaryomyc...    49   4e-04
gi|7484802|pir||T01307 alternative splicing factor ASF-2 homolog...    49   4e-04
gi|30679143|ref|NP_567235.3| pre-mRNA splicing factor, putative ...    49   4e-04
gi|542588|pir||S41644 polyadenylate-binding protein - fruit fly ...    49   4e-04
gi|27730131|ref|XP_217884.1| similar to RIKEN cDNA 4932702K14 [R...    49   4e-04
gi|30679138|ref|NP_849537.1| pre-mRNA splicing factor, putative ...    49   4e-04
gi|38346724|emb|CAE04874.2| OSJNBa0086O06.22 [Oryza sativa (japo...    49   4e-04
gi|31200419|ref|XP_309157.1| ENSANGP00000018039 [Anopheles gambi...    49   4e-04
gi|50545625|ref|XP_500351.1| hypothetical protein [Yarrowia lipo...    48   5e-04
gi|16215602|emb|CAC95017.1| TIAR protein [Xenopus laevis]              48   5e-04
gi|46443655|gb|EAL02935.1| hypothetical protein CaO19.1646 [Cand...    48   5e-04
gi|42521960|ref|NP_967340.1| RNA-binding protein [Bdellovibrio b...    48   5e-04
gi|38091386|ref|XP_122209.4| similar to Poly(A) binding protein,...    48   5e-04
gi|7446361|pir||T12196 RNA-binding protein - fava bean (fragment...    48   5e-04
gi|46443527|gb|EAL02808.1| hypothetical protein CaO19.9215 [Cand...    48   5e-04
gi|30353795|gb|AAH52100.1| Pabpc1-prov protein [Xenopus laevis]        48   5e-04
gi|64970|emb|CAA40721.1| polyA binding protein [Xenopus laevis]        48   5e-04
gi|538581|pir||DNHUPA polyadenylate-binding protein - human >gnl...    48   5e-04
gi|13096196|pdb|1FXL|A Chain A, Crystal Structure Of Hud And Au-...    48   5e-04
gi|48094405|ref|XP_394166.1| similar to ENSANGP00000018039 [Apis...    48   5e-04
gi|49522239|gb|AAH75146.1| Unknown (protein for MGC:81970) [Xeno...    48   5e-04
gi|27924235|gb|AAH45063.1| Pabpn1-prov protein [Xenopus laevis]        48   7e-04
gi|49072414|ref|XP_400496.1| hypothetical protein UM02881.1 [Ust...    48   7e-04


>gi|15487635|gb|AAL00879.1| U2af splicing factor protein 1, isoform c
            [Caenorhabditis elegans]
          Length = 474

 Score =  734 bits (1896), Expect = 0.0
 Identities = 361/361 (100%), Positives = 361/361 (100%)
 Frame = -1

Query: 1086 YRFWDVPPTGFETTTPMEYKNMQAAGQVPRGSVQSAVPVVGPSVTCQSRRLYVGNIPFGC 907
            YRFWDVPPTGFETTTPMEYKNMQAAGQVPRGSVQSAVPVVGPSVTCQSRRLYVGNIPFGC
Sbjct: 114  YRFWDVPPTGFETTTPMEYKNMQAAGQVPRGSVQSAVPVVGPSVTCQSRRLYVGNIPFGC 173

Query: 906  NEEAMLDFFNQQMHLCGLAQAPGNPILLCQINLDKNFAFIEFRSIDETTAGMAFDGINFM 727
            NEEAMLDFFNQQMHLCGLAQAPGNPILLCQINLDKNFAFIEFRSIDETTAGMAFDGINFM
Sbjct: 174  NEEAMLDFFNQQMHLCGLAQAPGNPILLCQINLDKNFAFIEFRSIDETTAGMAFDGINFM 233

Query: 726  GQQLKVRRPRDYQPSQNTFDMNSRMPVSTIVVDSANKIFIGGLPNYLTEDQVKELLCSFG 547
            GQQLKVRRPRDYQPSQNTFDMNSRMPVSTIVVDSANKIFIGGLPNYLTEDQVKELLCSFG
Sbjct: 234  GQQLKVRRPRDYQPSQNTFDMNSRMPVSTIVVDSANKIFIGGLPNYLTEDQVKELLCSFG 293

Query: 546  PLKAFSLNVDSQGNSKGYAFAEYLDPTLTDQAIAGLNGMQLGDKQLVVQLACANQQRHNT 367
            PLKAFSLNVDSQGNSKGYAFAEYLDPTLTDQAIAGLNGMQLGDKQLVVQLACANQQRHNT
Sbjct: 294  PLKAFSLNVDSQGNSKGYAFAEYLDPTLTDQAIAGLNGMQLGDKQLVVQLACANQQRHNT 353

Query: 366  NLPNSASAIAGIDLSQGAGRATEILCLMNMVTEDELKADDEYEEILEDVRDECSKYGIVR 187
            NLPNSASAIAGIDLSQGAGRATEILCLMNMVTEDELKADDEYEEILEDVRDECSKYGIVR
Sbjct: 354  NLPNSASAIAGIDLSQGAGRATEILCLMNMVTEDELKADDEYEEILEDVRDECSKYGIVR 413

Query: 186  SLEIPRPYEDHPVPGVGKVFVEFASTSDCQRAQAALTGRKFANRTVVTSYYDVDKYHNRQ 7
            SLEIPRPYEDHPVPGVGKVFVEFASTSDCQRAQAALTGRKFANRTVVTSYYDVDKYHNRQ
Sbjct: 414  SLEIPRPYEDHPVPGVGKVFVEFASTSDCQRAQAALTGRKFANRTVVTSYYDVDKYHNRQ 473

Query: 6    F 4
            F
Sbjct: 474  F 474



 Score = 90.1 bits (222), Expect = 1e-16
 Identities = 43/43 (100%), Positives = 43/43 (100%)
 Frame = -1

Query: 1491 MSDHQDGMKLEDIERQFLDVAQREGGLEAIQPTTGPLENEENL 1363
            MSDHQDGMKLEDIERQFLDVAQREGGLEAIQPTTGPLENEENL
Sbjct: 1    MSDHQDGMKLEDIERQFLDVAQREGGLEAIQPTTGPLENEENL 43


>gi|21245140|gb|AAM44400.1| U2af splicing factor protein 1, isoform d
            [Caenorhabditis elegans]
          Length = 471

 Score =  734 bits (1896), Expect = 0.0
 Identities = 361/361 (100%), Positives = 361/361 (100%)
 Frame = -1

Query: 1086 YRFWDVPPTGFETTTPMEYKNMQAAGQVPRGSVQSAVPVVGPSVTCQSRRLYVGNIPFGC 907
            YRFWDVPPTGFETTTPMEYKNMQAAGQVPRGSVQSAVPVVGPSVTCQSRRLYVGNIPFGC
Sbjct: 111  YRFWDVPPTGFETTTPMEYKNMQAAGQVPRGSVQSAVPVVGPSVTCQSRRLYVGNIPFGC 170

Query: 906  NEEAMLDFFNQQMHLCGLAQAPGNPILLCQINLDKNFAFIEFRSIDETTAGMAFDGINFM 727
            NEEAMLDFFNQQMHLCGLAQAPGNPILLCQINLDKNFAFIEFRSIDETTAGMAFDGINFM
Sbjct: 171  NEEAMLDFFNQQMHLCGLAQAPGNPILLCQINLDKNFAFIEFRSIDETTAGMAFDGINFM 230

Query: 726  GQQLKVRRPRDYQPSQNTFDMNSRMPVSTIVVDSANKIFIGGLPNYLTEDQVKELLCSFG 547
            GQQLKVRRPRDYQPSQNTFDMNSRMPVSTIVVDSANKIFIGGLPNYLTEDQVKELLCSFG
Sbjct: 231  GQQLKVRRPRDYQPSQNTFDMNSRMPVSTIVVDSANKIFIGGLPNYLTEDQVKELLCSFG 290

Query: 546  PLKAFSLNVDSQGNSKGYAFAEYLDPTLTDQAIAGLNGMQLGDKQLVVQLACANQQRHNT 367
            PLKAFSLNVDSQGNSKGYAFAEYLDPTLTDQAIAGLNGMQLGDKQLVVQLACANQQRHNT
Sbjct: 291  PLKAFSLNVDSQGNSKGYAFAEYLDPTLTDQAIAGLNGMQLGDKQLVVQLACANQQRHNT 350

Query: 366  NLPNSASAIAGIDLSQGAGRATEILCLMNMVTEDELKADDEYEEILEDVRDECSKYGIVR 187
            NLPNSASAIAGIDLSQGAGRATEILCLMNMVTEDELKADDEYEEILEDVRDECSKYGIVR
Sbjct: 351  NLPNSASAIAGIDLSQGAGRATEILCLMNMVTEDELKADDEYEEILEDVRDECSKYGIVR 410

Query: 186  SLEIPRPYEDHPVPGVGKVFVEFASTSDCQRAQAALTGRKFANRTVVTSYYDVDKYHNRQ 7
            SLEIPRPYEDHPVPGVGKVFVEFASTSDCQRAQAALTGRKFANRTVVTSYYDVDKYHNRQ
Sbjct: 411  SLEIPRPYEDHPVPGVGKVFVEFASTSDCQRAQAALTGRKFANRTVVTSYYDVDKYHNRQ 470

Query: 6    F 4
            F
Sbjct: 471  F 471



 Score = 90.1 bits (222), Expect = 1e-16
 Identities = 43/43 (100%), Positives = 43/43 (100%)
 Frame = -1

Query: 1491 MSDHQDGMKLEDIERQFLDVAQREGGLEAIQPTTGPLENEENL 1363
            MSDHQDGMKLEDIERQFLDVAQREGGLEAIQPTTGPLENEENL
Sbjct: 1    MSDHQDGMKLEDIERQFLDVAQREGGLEAIQPTTGPLENEENL 43


>gi|17556654|ref|NP_497326.1| U2AF splicing factor (55.4 kD) (uaf-1)
            [Caenorhabditis elegans]
 gi|6226906|sp|P90978|U2AF_CAEEL Splicing factor U2AF 65 kDa subunit
            (U2 auxiliary factor 65 kDa subunit) (U2 snRNP auxiliary
            factor large subunit) (U2AF65)
 gi|3334906|gb|AAC26982.1| splicing factor U2AF65 [Caenorhabditis
            elegans]
 gi|13559786|gb|AAK29989.1| U2af splicing factor protein 1, isoform a
            [Caenorhabditis elegans]
          Length = 496

 Score =  734 bits (1896), Expect = 0.0
 Identities = 361/361 (100%), Positives = 361/361 (100%)
 Frame = -1

Query: 1086 YRFWDVPPTGFETTTPMEYKNMQAAGQVPRGSVQSAVPVVGPSVTCQSRRLYVGNIPFGC 907
            YRFWDVPPTGFETTTPMEYKNMQAAGQVPRGSVQSAVPVVGPSVTCQSRRLYVGNIPFGC
Sbjct: 136  YRFWDVPPTGFETTTPMEYKNMQAAGQVPRGSVQSAVPVVGPSVTCQSRRLYVGNIPFGC 195

Query: 906  NEEAMLDFFNQQMHLCGLAQAPGNPILLCQINLDKNFAFIEFRSIDETTAGMAFDGINFM 727
            NEEAMLDFFNQQMHLCGLAQAPGNPILLCQINLDKNFAFIEFRSIDETTAGMAFDGINFM
Sbjct: 196  NEEAMLDFFNQQMHLCGLAQAPGNPILLCQINLDKNFAFIEFRSIDETTAGMAFDGINFM 255

Query: 726  GQQLKVRRPRDYQPSQNTFDMNSRMPVSTIVVDSANKIFIGGLPNYLTEDQVKELLCSFG 547
            GQQLKVRRPRDYQPSQNTFDMNSRMPVSTIVVDSANKIFIGGLPNYLTEDQVKELLCSFG
Sbjct: 256  GQQLKVRRPRDYQPSQNTFDMNSRMPVSTIVVDSANKIFIGGLPNYLTEDQVKELLCSFG 315

Query: 546  PLKAFSLNVDSQGNSKGYAFAEYLDPTLTDQAIAGLNGMQLGDKQLVVQLACANQQRHNT 367
            PLKAFSLNVDSQGNSKGYAFAEYLDPTLTDQAIAGLNGMQLGDKQLVVQLACANQQRHNT
Sbjct: 316  PLKAFSLNVDSQGNSKGYAFAEYLDPTLTDQAIAGLNGMQLGDKQLVVQLACANQQRHNT 375

Query: 366  NLPNSASAIAGIDLSQGAGRATEILCLMNMVTEDELKADDEYEEILEDVRDECSKYGIVR 187
            NLPNSASAIAGIDLSQGAGRATEILCLMNMVTEDELKADDEYEEILEDVRDECSKYGIVR
Sbjct: 376  NLPNSASAIAGIDLSQGAGRATEILCLMNMVTEDELKADDEYEEILEDVRDECSKYGIVR 435

Query: 186  SLEIPRPYEDHPVPGVGKVFVEFASTSDCQRAQAALTGRKFANRTVVTSYYDVDKYHNRQ 7
            SLEIPRPYEDHPVPGVGKVFVEFASTSDCQRAQAALTGRKFANRTVVTSYYDVDKYHNRQ
Sbjct: 436  SLEIPRPYEDHPVPGVGKVFVEFASTSDCQRAQAALTGRKFANRTVVTSYYDVDKYHNRQ 495

Query: 6    F 4
            F
Sbjct: 496  F 496



 Score = 90.1 bits (222), Expect = 1e-16
 Identities = 43/43 (100%), Positives = 43/43 (100%)
 Frame = -1

Query: 1491 MSDHQDGMKLEDIERQFLDVAQREGGLEAIQPTTGPLENEENL 1363
            MSDHQDGMKLEDIERQFLDVAQREGGLEAIQPTTGPLENEENL
Sbjct: 1    MSDHQDGMKLEDIERQFLDVAQREGGLEAIQPTTGPLENEENL 43


>gi|39586050|emb|CAE69126.1| Hypothetical protein CBG15152
            [Caenorhabditis briggsae]
          Length = 488

 Score =  709 bits (1829), Expect = 0.0
 Identities = 345/361 (95%), Positives = 356/361 (98%)
 Frame = -1

Query: 1086 YRFWDVPPTGFETTTPMEYKNMQAAGQVPRGSVQSAVPVVGPSVTCQSRRLYVGNIPFGC 907
            YRFWDVPPTGFE  TPMEYKNMQA+G VPRGSVQSAVPVVGPSVTCQSRRLYVGNIPFGC
Sbjct: 127  YRFWDVPPTGFENITPMEYKNMQASGAVPRGSVQSAVPVVGPSVTCQSRRLYVGNIPFGC 186

Query: 906  NEEAMLDFFNQQMHLCGLAQAPGNPILLCQINLDKNFAFIEFRSIDETTAGMAFDGINFM 727
            NEEAMLDFFNQQMHLC LAQAPGNPILLCQINLDKNFAFIEFRSIDETTAGMAFDGINFM
Sbjct: 187  NEEAMLDFFNQQMHLCNLAQAPGNPILLCQINLDKNFAFIEFRSIDETTAGMAFDGINFM 246

Query: 726  GQQLKVRRPRDYQPSQNTFDMNSRMPVSTIVVDSANKIFIGGLPNYLTEDQVKELLCSFG 547
            GQQLKVRRPRDYQPSQNTFDMN+RMPVS+IVVDSANKIFIGGLPNYLTEDQVKELLCSFG
Sbjct: 247  GQQLKVRRPRDYQPSQNTFDMNARMPVSSIVVDSANKIFIGGLPNYLTEDQVKELLCSFG 306

Query: 546  PLKAFSLNVDSQGNSKGYAFAEYLDPTLTDQAIAGLNGMQLGDKQLVVQLACANQQRHNT 367
            PLKAFSLNVDSQGNSKGYAFAEYLDPTLTDQAIAGLNGMQLGDKQLVVQLACANQ RHNT
Sbjct: 307  PLKAFSLNVDSQGNSKGYAFAEYLDPTLTDQAIAGLNGMQLGDKQLVVQLACANQTRHNT 366

Query: 366  NLPNSASAIAGIDLSQGAGRATEILCLMNMVTEDELKADDEYEEILEDVRDECSKYGIVR 187
            +LPNSASAIAGIDLSQGAGRATEILCLMNMVTEDEL++D++YEEILEDVR+ECSKYGIVR
Sbjct: 367  HLPNSASAIAGIDLSQGAGRATEILCLMNMVTEDELRSDEDYEEILEDVREECSKYGIVR 426

Query: 186  SLEIPRPYEDHPVPGVGKVFVEFASTSDCQRAQAALTGRKFANRTVVTSYYDVDKYHNRQ 7
            SLEIPRPY+DHPVPGVGKVFVEFA+TSDCQRAQAALTGRKFANRTVVTSYYDVDKYHNRQ
Sbjct: 427  SLEIPRPYDDHPVPGVGKVFVEFATTSDCQRAQAALTGRKFANRTVVTSYYDVDKYHNRQ 486

Query: 6    F 4
            F
Sbjct: 487  F 487



 Score = 35.4 bits (80), Expect = 3.6
 Identities = 18/27 (66%), Positives = 22/27 (80%)
 Frame = -1

Query: 1464 LEDIERQFLDVAQREGGLEAIQPTTGP 1384
            LE+IERQFLDVAQR+ GLE++Q    P
Sbjct: 9    LEEIERQFLDVAQRD-GLESLQEDVKP 34


>gi|4033483|sp|P90727|U2AF_CAEBR Splicing factor U2AF 65 kDa subunit
            (U2 auxiliary factor 65 kDa subunit) (U2 SNRNP auxiliary
            factor large subunit) (U2AF65)
 gi|1710361|gb|AAB38280.1| splicing factor U2AF65 [Caenorhabditis
            briggsae]
          Length = 488

 Score =  709 bits (1829), Expect = 0.0
 Identities = 345/361 (95%), Positives = 356/361 (98%)
 Frame = -1

Query: 1086 YRFWDVPPTGFETTTPMEYKNMQAAGQVPRGSVQSAVPVVGPSVTCQSRRLYVGNIPFGC 907
            YRFWDVPPTGFE  TPMEYKNMQA+G VPRGSVQSAVPVVGPSVTCQSRRLYVGNIPFGC
Sbjct: 127  YRFWDVPPTGFENITPMEYKNMQASGAVPRGSVQSAVPVVGPSVTCQSRRLYVGNIPFGC 186

Query: 906  NEEAMLDFFNQQMHLCGLAQAPGNPILLCQINLDKNFAFIEFRSIDETTAGMAFDGINFM 727
            NEEAMLDFFNQQMHLC LAQAPGNPILLCQINLDKNFAFIEFRSIDETTAGMAFDGINFM
Sbjct: 187  NEEAMLDFFNQQMHLCNLAQAPGNPILLCQINLDKNFAFIEFRSIDETTAGMAFDGINFM 246

Query: 726  GQQLKVRRPRDYQPSQNTFDMNSRMPVSTIVVDSANKIFIGGLPNYLTEDQVKELLCSFG 547
            GQQLKVRRPRDYQPSQNTFDMN+RMPVS+IVVDSANKIFIGGLPNYLTEDQVKELLCSFG
Sbjct: 247  GQQLKVRRPRDYQPSQNTFDMNARMPVSSIVVDSANKIFIGGLPNYLTEDQVKELLCSFG 306

Query: 546  PLKAFSLNVDSQGNSKGYAFAEYLDPTLTDQAIAGLNGMQLGDKQLVVQLACANQQRHNT 367
            PLKAFSLNVDSQGNSKGYAFAEYLDPTLTDQAIAGLNGMQLGDKQLVVQLACANQ RHNT
Sbjct: 307  PLKAFSLNVDSQGNSKGYAFAEYLDPTLTDQAIAGLNGMQLGDKQLVVQLACANQTRHNT 366

Query: 366  NLPNSASAIAGIDLSQGAGRATEILCLMNMVTEDELKADDEYEEILEDVRDECSKYGIVR 187
            +LPNSASAIAGIDLSQGAGRATEILCLMNMVTEDEL++D++YEEILEDVR+ECSKYGIVR
Sbjct: 367  HLPNSASAIAGIDLSQGAGRATEILCLMNMVTEDELRSDEDYEEILEDVREECSKYGIVR 426

Query: 186  SLEIPRPYEDHPVPGVGKVFVEFASTSDCQRAQAALTGRKFANRTVVTSYYDVDKYHNRQ 7
            SLEIPRPY+DHPVPGVGKVFVEFA+TSDCQRAQAALTGRKFANRTVVTSYYDVDKYHNRQ
Sbjct: 427  SLEIPRPYDDHPVPGVGKVFVEFATTSDCQRAQAALTGRKFANRTVVTSYYDVDKYHNRQ 486

Query: 6    F 4
            F
Sbjct: 487  F 487



 Score = 35.4 bits (80), Expect = 3.6
 Identities = 18/27 (66%), Positives = 22/27 (80%)
 Frame = -1

Query: 1464 LEDIERQFLDVAQREGGLEAIQPTTGP 1384
            LE+IERQFLDVAQR+ GLE++Q    P
Sbjct: 9    LEEIERQFLDVAQRD-GLESLQEDVKP 34




[DB home][top]