Homology by BLASTX
BLASTX 2.2.4 [Aug-26-2002]
Query= Y62E10A_11
(297 letters)
Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
1,967,186 sequences; 661,712,633 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|17543870|ref|NP_502578.1| guanine nucleotide exchange factor ... 190 7e-48
gi|39587672|emb|CAE58610.1| Hypothetical protein CBG01777 [Caeno... 165 2e-40
gi|24582782|ref|NP_609209.2| CG7787-PA [Drosophila melanogaster]... 75 3e-13
gi|38048201|gb|AAR10003.1| similar to Drosophila melanogaster CG... 74 1e-12
gi|31211879|ref|XP_314924.1| ENSANGP00000012377 [Anopheles gambi... 68 5e-11
gi|48098422|ref|XP_394070.1| similar to ENSANGP00000012377 [Apis... 58 4e-08
gi|50761270|ref|XP_419250.1| PREDICTED: similar to RAB-interacti... 52 4e-06
gi|47222863|emb|CAF96530.1| unnamed protein product [Tetraodon n... 51 7e-06
gi|50540092|ref|NP_001002511.1| zgc:92821 [Danio rerio] >gnl|BL_... 50 2e-05
gi|27712066|ref|XP_222649.1| similar to Guanine nucleotide excha... 49 3e-05
gi|21704004|ref|NP_663485.1| RAB-interacting factor [Mus musculu... 49 3e-05
gi|13399969|pdb|1HXR|A Chain A, Crystal Structure Of Mss4 At 1.6... 49 3e-05
gi|27691280|ref|XP_227241.1| similar to Guanine nucleotide excha... 48 4e-05
gi|2135758|pir||I52427 guanine-nucleotide-releasing protein Mss4... 48 6e-05
gi|19923149|ref|NP_002862.2| RAB-interacting factor; Ras-specifi... 48 6e-05
gi|30584587|gb|AAP36546.1| Homo sapiens RAB interacting factor [... 48 6e-05
gi|38048597|gb|AAR10201.1| similar to Drosophila melanogaster CG... 47 1e-04
gi|19113094|ref|NP_596302.1| putative guanine nucleotide exchang... 40 0.009
gi|50421897|ref|XP_459507.1| unnamed protein product [Debaryomyc... 40 0.012
gi|33300341|emb|CAE18044.1| Hypothetical protein ZK970.8 [Caenor... 37 0.13
gi|39597186|emb|CAE59413.1| Hypothetical protein CBG02782 [Caeno... 37 0.13
gi|46433705|gb|EAK93136.1| hypothetical protein CaO19.6118 [Cand... 36 0.23
gi|1345731|sp|P49454|CENF_HUMAN CENP-F kinetochore protein (Cent... 33 1.5
gi|50291801|ref|XP_448333.1| unnamed protein product [Candida gl... 33 1.9
gi|14670381|ref|NP_057427.2| centromere protein F (350/400kD); m... 33 1.9
gi|50260688|gb|EAL23341.1| hypothetical protein CNBA4570 [Crypto... 32 2.5
gi|50552540|ref|XP_503680.1| hypothetical protein [Yarrowia lipo... 32 3.3
gi|19527264|ref|NP_598809.1| Casitas B-lineage lymphoma-like 1; ... 31 5.6
gi|26339810|dbj|BAC33568.1| unnamed protein product [Mus musculus] 31 5.6
gi|41471239|gb|AAS07390.1| unknown [Homo sapiens] 31 5.6
gi|9622093|gb|AAF89617.1| E-cadherin binding protein E7 [Mus mus... 31 5.6
gi|13376204|ref|NP_079090.1| Cas-Br-M (murine) ecotropic retrovi... 31 5.6
gi|34785057|gb|AAH27460.2| CBLL1 protein [Homo sapiens] 31 5.6
gi|34864203|ref|XP_234039.2| similar to Casitas B-lineage lympho... 31 5.6
gi|50728003|ref|XP_415946.1| PREDICTED: similar to Cas-Br-M (mur... 31 7.4
gi|29348623|ref|NP_812126.1| S-adenosylmethionine:tRNA ribosyltr... 30 9.6
gi|25026575|ref|NP_736629.1| putative lipoprotein [Corynebacteri... 30 9.6
gi|296133|emb|CAA49903.1| DSS4 [Saccharomyces cerevisiae] >gnl|B... 30 9.6
gi|6325274|ref|NP_015342.1| Nucleotide release factor functionin... 30 9.6
>gi|17543870|ref|NP_502578.1| guanine nucleotide exchange factor
mss4 homolog like (4O151) [Caenorhabditis elegans]
gi|20139280|sp|Q9U1X4|MSS4_CAEEL Guanine nucleotide exchange factor
MSS4 homolog
Length = 98
Score = 190 bits (482), Expect = 7e-48
Identities = 90/98 (91%), Positives = 90/98 (91%)
Frame = +1
Query: 1 MTTEYLDEERDLPLPRQKKGIDHTQTEPIRGFFGVKDMFAFENVGFTRSSEGKRYLVCGE 180
MTTEYLDEERDLPLPRQKKGIDHTQTEPIRGFFGVKDMFAFENVGFTRSSEGKRYLVCGE
Sbjct: 1 MTTEYLDEERDLPLPRQKKGIDHTQTEPIRGFFGVKDMFAFENVGFTRSSEGKRYLVCGE 60
Query: 181 CEQGPVGFVDPVTEMNYVSPERLDVLPDXXXXXXXXGK 294
CEQGPVGFVDPVTEMNYVSPERLDVLPD GK
Sbjct: 61 CEQGPVGFVDPVTEMNYVSPERLDVLPDVAAAAVEAGK 98