Homology by BLASTX


BLASTX 2.2.4 [Aug-26-2002]
Query= Y57G11C_20
         (729 letters)

Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
           1,967,186 sequences; 661,712,633 total letters


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|17543768|ref|NP_502792.1| putative nuclear protein family mem...   436   e-121
gi|17557009|ref|NP_498975.1| putative nuclear protein (3K15) [Ca...   325   6e-88
gi|17557015|ref|NP_498973.1| putative nuclear protein (3K9) [Cae...   288   6e-77
gi|102497|pir||S15800 hypothetical protein 5 (cosmid ZK637) - Ca...   270   2e-71
gi|39583446|emb|CAE73904.1| Hypothetical protein CBG21510 [Caeno...   212   7e-54
gi|1346637|sp|P02565|MYH3_CHICK Myosin heavy chain, fast skeleta...    40   0.064
gi|86358|pir||A29320 myosin heavy chain, fast skeletal muscle, e...    40   0.064
gi|50757613|ref|XP_415578.1| PREDICTED: similar to myosin heavy ...    40   0.064
gi|487635|gb|AAA81163.1| paramyosin                                    39   0.083
gi|487637|gb|AAA81164.1| paramyosin                                    39   0.083
gi|3041711|sp|Q05870|MYSP_SCHJA Paramyosin (Antigen Sj97) >gnl|B...    39   0.083
gi|555805|gb|AAA81003.1| paramyosin                                    39   0.083
gi|4761226|gb|AAD29285.1| paramyosin [Schistosoma japonicum]           39   0.11
gi|45383668|ref|NP_989559.1| myosin, heavy polypeptide 2, skelet...    37   0.41
gi|50757921|ref|XP_425359.1| PREDICTED: similar to Myosin heavy ...    37   0.54
gi|86355|pir||JX0178 myosin heavy chain, fast skeletal muscle, a...    37   0.54
gi|22121649|gb|AAM88909.1| fast myosin heavy chain HCII [Gallus ...    37   0.54
gi|50757621|ref|XP_415581.1| PREDICTED: similar to fast myosin h...    37   0.54
gi|13432175|sp|P13538|MYSS_CHICK Myosin heavy chain, skeletal mu...    37   0.54
gi|50757923|ref|XP_425360.1| PREDICTED: similar to fast myosin h...    36   0.71
gi|28502725|gb|AAH47162.1| Nup155-prov protein [Xenopus laevis]        36   0.71
gi|23509386|ref|NP_702053.1| hypothetical protein [Plasmodium fa...    36   0.71
gi|9800488|gb|AAF99315.1| fast myosin heavy chain isoform 3 [Gal...    36   0.92
gi|42476190|ref|NP_060004.2| myosin, heavy polypeptide 2, skelet...    36   0.92
gi|13431716|sp|Q9UKX2|MYH2_HUMAN Myosin heavy chain, skeletal mu...    36   0.92
gi|41386691|ref|NP_776542.1| myosin, heavy polypeptide 1, skelet...    36   0.92
gi|13431707|sp|Q28641|MYH4_RABIT Myosin heavy chain, skeletal mu...    36   0.92
gi|13560269|dbj|BAB40920.1| myosin heavy chain 2a [Bos taurus]         36   0.92
gi|21489941|ref|NP_659210.1| myosin, heavy polypeptide 2, skelet...    36   0.92
gi|21907898|dbj|BAC05679.1| myosin heavy chain 2a [Equus caballus]     36   0.92
gi|34870880|ref|XP_340818.1| myosin, heavy polypeptide 4 [Rattus...    36   0.92
gi|23100105|ref|NP_693571.1| hypothetical protein OB2650 [Oceano...    36   0.92
gi|38091413|ref|XP_354615.1| myosin, heavy polypeptide 1, skelet...    36   0.92
gi|34870884|ref|XP_213345.2| similar to Myosin heavy chain, skel...    36   0.92
gi|1842051|gb|AAB47555.1| myosin heavy chain [Gallus gallus]           36   0.92
gi|5360750|dbj|BAA82146.1| myosin heavy chain 2x [Sus scrofa]          36   0.92
gi|11024712|ref|NP_060003.1| myosin, heavy polypeptide 4, skelet...    36   0.92
gi|5360746|dbj|BAA82144.1| myosin heavy chain 2a [Sus scrofa]          36   0.92
gi|7669506|ref|NP_005954.2| myosin, heavy polypeptide 1, skeleta...    36   0.92
gi|17555362|ref|NP_498314.1| cyclin-like F-box and PPAK motif (3...    35   1.2
gi|21907900|dbj|BAC05680.1| myosin heavy chain 2x [Equus caballus]     35   1.6
gi|7511090|pir||T29011 hypothetical protein ZK328.6 - Caenorhabd...    35   1.6
gi|23379831|gb|AAM88910.1| fast myosin heavy chain HCIII [Gallus...    35   1.6
gi|38091417|ref|XP_354617.1| similar to myosin heavy chain 2b [M...    35   1.6
gi|34870888|ref|XP_340819.1| similar to myosin heavy chain 2b [R...    35   1.6
gi|50757619|ref|XP_415580.1| PREDICTED: similar to myosin, heavy...    35   1.6
gi|50757617|ref|XP_415579.1| PREDICTED: similar to skeletal myos...    35   1.6
gi|38347763|dbj|BAD01607.1| myosin heavy chain [Lethenteron japo...    35   2.1
gi|6683485|dbj|BAA89233.1| skeletal myosin heavy chain [Gallus g...    35   2.1
gi|39582090|emb|CAE63733.1| Hypothetical protein CBG08261 [Caeno...    34   3.5
gi|5360748|dbj|BAA82145.1| myosin heavy chain 2b [Sus scrofa]          34   3.5
gi|23509126|ref|NP_701794.1| hypothetical protein [Plasmodium fa...    34   3.5
gi|21483478|gb|AAM52714.1| LD47517p [Drosophila melanogaster]          33   6.0
gi|50554657|ref|XP_504737.1| hypothetical protein [Yarrowia lipo...    33   6.0
gi|24644359|ref|NP_730981.1| CG2182-PB [Drosophila melanogaster]...    33   6.0
gi|24644357|ref|NP_649570.1| CG2182-PA [Drosophila melanogaster]...    33   6.0
gi|2290158|gb|AAC58917.1| envelope glycoprotein [Human immunodef...    33   7.8
gi|23479108|gb|EAA16028.1| Drosophila melanogaster CG15040 gene ...    33   7.8


>gi|17543768|ref|NP_502792.1| putative nuclear protein family
           member, with a coiled coil domain (4P565)
           [Caenorhabditis elegans]
 gi|7510282|pir||T27226 hypothetical protein Y57G11C.14 -
           Caenorhabditis elegans
 gi|3881190|emb|CAB16515.1| Hypothetical protein Y57G11C.14
           [Caenorhabditis elegans]
          Length = 242

 Score =  436 bits (1122), Expect = e-121
 Identities = 219/242 (90%), Positives = 219/242 (90%)
 Frame = +1

Query: 1   MECVNCDCTVKTMDNLDKAIRELLQRGKHVNRMMDNEKMIREARRMEEVQQLKMQIPKPV 180
           MECVNCDCTVKTMDNLDKAIRELLQRGKHVNRMMDNEKMIREARRMEEVQQLKMQIPKPV
Sbjct: 1   MECVNCDCTVKTMDNLDKAIRELLQRGKHVNRMMDNEKMIREARRMEEVQQLKMQIPKPV 60

Query: 181 DKKPRSSEKNLKLISCEETCMDETLKNSSKPRIIFNKQLGHAESIDFDVPSLSYESSDKG 360
           DKKPRSSEKNLKLISCEETCMDETLKNSSKPRIIFNKQLGHAESIDFDVPSLSYESSDKG
Sbjct: 61  DKKPRSSEKNLKLISCEETCMDETLKNSSKPRIIFNKQLGHAESIDFDVPSLSYESSDKG 120

Query: 361 XXXXXXXXXXXNPXXXXXXXXXXXXEATTISELTTSTFKKAKNPSGGALVLDNHYLINND 540
                      NP            EATTISELTTSTFKKAKNPSGGALVLDNHYLINND
Sbjct: 121 VVESTTSTSVSNPKKTTSSSMFTKSEATTISELTTSTFKKAKNPSGGALVLDNHYLINND 180

Query: 541 DGTVSKLPMKIYVKQHLEDGSLDVQLVFFDENSQKVMDISMLVNGKKIKDVQFCGKDAKL 720
           DGTVSKLPMKIYVKQHLEDGSLDVQLVFFDENSQKVMDISMLVNGKKIKDVQFCGKDAKL
Sbjct: 181 DGTVSKLPMKIYVKQHLEDGSLDVQLVFFDENSQKVMDISMLVNGKKIKDVQFCGKDAKL 240

Query: 721 VN 726
           VN
Sbjct: 241 VN 242




[DB home][top]