Homology by BLASTX
BLASTX 2.2.4 [Aug-26-2002]
Query= Y57E12AL_4
(753 letters)
Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
1,967,186 sequences; 661,712,633 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|7324205|gb|AAF59612.1| Mediator protein 6 [Caenorhabditis ele... 429 e-119
gi|25154123|ref|NP_504791.2| MeDiaTor, of RNA polymerase II tran... 421 e-116
gi|39594416|emb|CAE71994.1| Hypothetical protein CBG19070 [Caeno... 354 1e-96
gi|39594360|emb|CAE71938.1| Hypothetical protein CBG19002 [Caeno... 179 4e-44
gi|31235097|ref|XP_319180.1| ENSANGP00000011842 [Anopheles gambi... 129 7e-29
gi|50763541|ref|XP_422901.1| PREDICTED: similar to RNA polymeras... 122 8e-27
gi|26354242|dbj|BAC40749.1| unnamed protein product [Mus musculus] 122 8e-27
gi|2618738|gb|AAB84363.1| RNA polymerase transcriptional regulat... 122 8e-27
gi|42544155|ref|NP_005457.2| mediator of RNA polymerase II trans... 122 8e-27
gi|34867365|ref|XP_216759.2| similar to RNA polymerase II transc... 122 8e-27
gi|30583885|gb|AAP36191.1| Homo sapiens mediator of RNA polymera... 122 8e-27
gi|50797383|ref|XP_423945.1| PREDICTED: similar to RNA polymeras... 122 8e-27
gi|3329506|gb|AAC26869.1| RNA polymerase transcriptional regulat... 122 1e-26
gi|50344822|ref|NP_001002084.1| zgc:86933 [Danio rerio] >gnl|BL_... 120 4e-26
gi|28573123|ref|NP_731403.2| CG9473-PB [Drosophila melanogaster]... 119 5e-26
gi|5360103|gb|AAD42870.1| NY-REN-28 antigen [Homo sapiens] 118 1e-25
gi|47221313|emb|CAG13249.1| unnamed protein product [Tetraodon n... 103 5e-21
gi|27754027|ref|NP_081489.2| mediator of RNA polymerase II trans... 93 5e-18
gi|11231121|dbj|BAB18155.1| hypothetical protein [Macaca fascicu... 93 5e-18
gi|49067664|ref|XP_398122.1| hypothetical protein UM00507.1 [Ust... 86 1e-15
gi|50554547|ref|XP_504682.1| hypothetical protein [Yarrowia lipo... 86 1e-15
gi|19114415|ref|NP_593503.1| putative Component of RNA polymeras... 85 2e-15
gi|22331241|ref|NP_188772.2| RNA polymerase transcriptional regu... 70 6e-11
gi|46437736|gb|EAK97077.1| hypothetical protein CaO19.7420 [Cand... 69 1e-10
gi|45184769|ref|NP_982487.1| AAL055Cp [Eremothecium gossypii] >g... 68 2e-10
gi|50305387|ref|XP_452653.1| unnamed protein product [Kluyveromy... 68 2e-10
gi|50426793|ref|XP_461994.1| unnamed protein product [Debaryomyc... 68 2e-10
gi|50286307|ref|XP_445582.1| unnamed protein product [Candida gl... 68 2e-10
gi|6321849|ref|NP_011925.1| RNA polymerase II transcriptional re... 56 7e-07
gi|23509887|ref|NP_702554.1| hypothetical protein [Plasmodium fa... 45 0.001
gi|19075059|ref|NP_586660.1| hypothetical protein [Encephalitozo... 45 0.001
gi|50261024|gb|EAL23674.1| hypothetical protein CNBA3210 [Crypto... 39 0.089
gi|46227267|gb|EAK88217.1| similarity to MED6, RNA polymerase II... 39 0.089
gi|23508379|ref|NP_701048.1| heat shock protein 90, putative [Pl... 34 3.7
gi|12657905|ref|NP_075318.1| gp51 [Mycobacteriophage Bxb1] >gnl|... 33 4.9
>gi|7324205|gb|AAF59612.1| Mediator protein 6 [Caenorhabditis
elegans]
Length = 250
Score = 429 bits (1103), Expect = e-119
Identities = 213/250 (85%), Positives = 213/250 (85%)
Frame = -1
Query: 753 MMPRMGPPAAARQDNPLHVSFRNPQWPPNFINKDNVLDYFCNQANAFYEMNSCNQQIRMQ 574
MMPRMGPPAAARQDNPLHVSFRNPQWPPNFINKDNVLDYFCNQANAFYEMNSCNQQIRMQ
Sbjct: 1 MMPRMGPPAAARQDNPLHVSFRNPQWPPNFINKDNVLDYFCNQANAFYEMNSCNQQIRMQ 60
Query: 573 NIVNRTVEECLRTMPGIQYVLWYSQPPLFIICKQRRNNVTNVSPIAYYYVINGSVHQAPD 394
NIVNRTVEECLRTMPGIQYVLWYSQPPLFIICKQRRNNVTNVSPIAYYYVINGSVHQAPD
Sbjct: 61 NIVNRTVEECLRTMPGIQYVLWYSQPPLFIICKQRRNNVTNVSPIAYYYVINGSVHQAPD 120
Query: 393 MYSLVQSRLLGALEPLRNAFGEVTNYSRYNTAKGYYWEFKNKPNVXXXXXXXXXXXXXXX 214
MYSLVQSRLLGALEPLRNAFGEVTNYSRYNTAKGYYWEFKNKPNV
Sbjct: 121 MYSLVQSRLLGALEPLRNAFGEVTNYSRYNTAKGYYWEFKNKPNVKKREEEKKEDEEEKL 180
Query: 213 XXRSTNFQKTRTMMLLNQLFSEMPAEDAXXXXXXXXXXXXXXXXXXXXEPTTSTDEPKFA 34
RSTNFQKTRTMMLLNQLFSEMPAEDA EPTTSTDEPKFA
Sbjct: 181 EDRSTNFQKTRTMMLLNQLFSEMPAEDALEREEKEEVEEEEEETLKTEEPTTSTDEPKFA 240
Query: 33 EPTARTTSKQ 4
EPTARTTSKQ
Sbjct: 241 EPTARTTSKQ 250