Homology by BLASTX


BLASTX 2.2.4 [Aug-26-2002]
Query= Y55B1AL_3
         (2772 letters)

Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
           1,967,186 sequences; 661,712,633 total letters


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|17556224|ref|NP_497213.1| DEAD/DEAH box helicase and helicase...  1718   0.0
gi|39586142|emb|CAE69218.1| Hypothetical protein CBG15258 [Caeno...  1451   0.0
gi|50746585|ref|XP_420565.1| PREDICTED: similar to DNA helicase ...   515   e-144
gi|19525733|ref|NP_598375.1| DNA helicase HEL308 [Homo sapiens] ...   503   e-141
gi|47210458|emb|CAF94327.1| unnamed protein product [Tetraodon n...   465   e-129
gi|40215561|gb|AAR82756.1| RE48845p [Drosophila melanogaster]         434   e-120
gi|24660651|ref|NP_648178.1| CG7972-PA [Drosophila melanogaster]...   434   e-120
gi|31239657|ref|XP_320242.1| ENSANGP00000016523 [Anopheles gambi...   432   e-119
gi|26342655|dbj|BAC34984.1| unnamed protein product [Mus musculus]    384   e-105
gi|34876045|ref|XP_341187.1| similar to DNA helicase HEL308 [Rat...   380   e-103
gi|48103723|ref|XP_395631.1| similar to CG7972-PA [Apis mellifera]    372   e-101
gi|19110784|gb|AAL85275.1| DNA helicase HEL308 [Mus musculus]         366   2e-99
gi|31198797|ref|XP_308346.1| ENSANGP00000019077 [Anopheles gambi...   338   3e-91
gi|40805845|ref|NP_006587.3| DNA polymerase theta isoform 1; pol...   337   9e-91
gi|40805847|ref|NP_955452.1| DNA polymerase theta isoform 2; pol...   337   9e-91
gi|38037038|gb|AAR08421.1| DNA polymerase theta [Homo sapiens]        337   9e-91
gi|30387615|ref|NP_084253.1| DNA polymerase theta [Mus musculus]...   333   1e-89
gi|32306445|gb|AAN39838.1| DNA polymerase Q [Mus musculus]            333   1e-89
gi|13892061|gb|AAK39635.1| DNA polymerase theta [Homo sapiens]        332   4e-89
gi|17933644|ref|NP_524333.1| CG6019-PA [Drosophila melanogaster]...   326   2e-87
gi|37359681|emb|CAE47762.1| SI:bZ1P14.5 (novel protein similar t...   324   6e-87
gi|47216119|emb|CAG11187.1| unnamed protein product [Tetraodon n...   320   2e-85
gi|50729526|ref|XP_416549.1| PREDICTED: similar to DNA polymeras...   293   1e-77
gi|15233883|ref|NP_194996.1| DNA-directed DNA polymerase family ...   283   1e-74
gi|32414435|ref|XP_327697.1| hypothetical protein [Neurospora cr...   270   1e-70
gi|34869354|ref|XP_221423.2| similar to DNA polymerase theta sho...   254   8e-66
gi|49090830|ref|XP_406876.1| hypothetical protein AN2739.2 [Aspe...   247   1e-63
gi|46124913|ref|XP_387010.1| hypothetical protein FG06834.1 [Gib...   237   1e-60
gi|46227703|gb|EAK88623.1| DEXDc+HELICc, mus308/POLQ like SFII D...   212   4e-53
gi|18312257|ref|NP_558924.1| ATP-dependent, DNA binding helicase...   197   1e-48
gi|14521089|ref|NP_126564.1| dna helicase related protein [Pyroc...   184   1e-44
gi|48838732|ref|ZP_00295672.1| COG1204: Superfamily II helicase ...   183   2e-44
gi|45358453|ref|NP_988010.1| superfamily II helicase [Methanococ...   181   1e-43
gi|14600518|ref|NP_147034.1| helicase [Aeropyrum pernix K1] >gnl...   181   1e-43
gi|20092019|ref|NP_618094.1| helicase [Methanosarcina acetivoran...   179   2e-43
gi|11500032|ref|NP_071282.1| SKI2-family helicase [Archaeoglobus...   177   9e-43
gi|18977049|ref|NP_578406.1| helicase [Pyrococcus furiosus DSM 3...   175   5e-42
gi|21226527|ref|NP_632449.1| helicase [Methanosarcina mazei Go1]...   175   5e-42
gi|14591093|ref|NP_143168.1| hypothetical protein PH1280 [Pyroco...   174   1e-41
gi|16081891|ref|NP_394295.1| DNA helicase related protein [Therm...   172   3e-41
gi|29247580|gb|EAA39138.1| GLP_302_20634_23333 [Giardia lamblia ...   172   4e-41
gi|20093551|ref|NP_613398.1| Predicted Superfamily II helicase [...   170   1e-40
gi|13541645|ref|NP_111333.1| Predicted helicase [Thermoplasma vo...   169   3e-40
gi|23619253|ref|NP_705215.1| helicase, putative [Plasmodium falc...   159   3e-37
gi|15791161|ref|NP_280985.1| DNA repair protein; Rad24b [Halobac...   156   2e-36
gi|15920808|ref|NP_376477.1| 704aa long hypothetical helicase [S...   154   1e-35
gi|15899206|ref|NP_343811.1| DNA helicase related protein [Sulfo...   147   1e-33
gi|18202627|sp|Q97VY9|HELS_SULSO Putative ski2-type helicase          146   2e-33
gi|50257539|gb|EAL20244.1| hypothetical protein CNBF0560 [Crypto...   144   1e-32
gi|39584972|emb|CAE64396.1| Hypothetical protein CBG09086 [Caeno...   143   3e-32
gi|48478452|ref|YP_024158.1| helicase involved in UV-protection ...   141   1e-31
gi|6066463|emb|CAB58415.1| possible MUS308 homolog [Leishmania m...   141   1e-31
gi|15218086|ref|NP_173520.1| U5 small nuclear ribonucleoprotein ...   140   1e-31
gi|9755332|ref|NP_011263.2| Meoisis specific DNA helicase involv...   140   1e-31
gi|17377416|sp|P51979|HFM1_YEAST ATP-dependent DNA helicase MER3...   140   1e-31
gi|48852109|ref|ZP_00306300.1| COG1204: Superfamily II helicase ...   139   4e-31
gi|45201209|ref|NP_986779.1| AGR113Wp [Eremothecium gossypii] >g...   138   8e-31
gi|23489673|gb|EAA21639.1| hypothetical protein [Plasmodium yoel...   138   8e-31
gi|6321020|ref|NP_011099.1| RNA helicase-related protein require...   138   8e-31
gi|10435899|dbj|BAB14698.1| unnamed protein product [Homo sapiens]    137   1e-30
gi|38104023|gb|EAA50649.1| hypothetical protein MG04408.4 [Magna...   137   1e-30
gi|38567201|emb|CAE76494.1| related to ATP dependent RNA helicas...   137   1e-30
gi|15227913|ref|NP_181756.1| U5 small nuclear ribonucleoprotein ...   137   1e-30
gi|38104038|gb|EAA50661.1| hypothetical protein MG04420.4 [Magna...   137   1e-30
gi|29246818|gb|EAA38401.1| GLP_0_26994_31778 [Giardia lamblia AT...   137   1e-30
gi|32422881|ref|XP_331884.1| hypothetical protein [Neurospora cr...   137   1e-30
gi|15291373|gb|AAK92955.1| GH18520p [Drosophila melanogaster]         136   2e-30
gi|24647182|ref|NP_650472.2| CG5205-PA [Drosophila melanogaster]...   136   2e-30
gi|50556536|ref|XP_505676.1| hypothetical protein [Yarrowia lipo...   136   3e-30
gi|17555442|ref|NP_498252.1| DEAD/DEAH box helicase and helicase...   135   5e-30
gi|50510635|dbj|BAD32303.1| mKIAA0788 protein [Mus musculus]          135   7e-30
gi|34858664|ref|XP_215831.2| similar to KIAA0788 protein [Rattus...   135   7e-30
gi|15669311|ref|NP_248116.1| putative SKI2-family helicase [Meth...   135   7e-30
gi|40018610|ref|NP_796188.2| U5 snRNP-specific protein, 200 kDa;...   135   7e-30
gi|15791037|ref|NP_280861.1| pre-mRNA splicing helicase; Brr2 [H...   135   7e-30
gi|19114258|ref|NP_593346.1| putative U5 snRNP-specific 200kd pr...   134   9e-30
gi|40217847|ref|NP_054733.2| U5 snRNP-specific protein, 200-KD [...   134   9e-30
gi|45861372|gb|AAS78571.1| 200 kDa U5 snRNP-specific spliceosoma...   134   9e-30
gi|20521660|dbj|BAA34508.2| KIAA0788 protein [Homo sapiens]           134   9e-30
gi|12643640|sp|O75643|U520_HUMAN U5 small nuclear ribonucleoprot...   134   1e-29
gi|2131277|pir||S61610 HFM1 protein - yeast (Saccharomyces cerev...   134   2e-29
gi|19074342|ref|NP_585848.1| PRE-mRNA SPLICING HELICASE [Encepha...   134   2e-29
gi|42406352|gb|AAH65924.1| U5-200KD protein [Homo sapiens]            134   2e-29
gi|780546|gb|AAA93159.1| Hfm1p                                        134   2e-29
gi|10436768|dbj|BAB14906.1| unnamed protein product [Homo sapiens]    132   3e-29
gi|46108656|ref|XP_381386.1| hypothetical protein FG01210.1 [Gib...   132   6e-29
gi|49087332|ref|XP_405615.1| hypothetical protein AN1478.2 [Aspe...   130   1e-28
gi|49074438|ref|XP_401353.1| hypothetical protein UM03738.1 [Ust...   130   2e-28
gi|31242349|ref|XP_321605.1| ENSANGP00000009625 [Anopheles gambi...   129   3e-28
gi|46437029|gb|EAK96382.1| hypothetical protein CaO19.3098 [Cand...   129   4e-28
gi|32419999|ref|XP_330443.1| hypothetical protein [Neurospora cr...   128   6e-28
gi|33865170|ref|NP_896729.1| putative DNA helicase [Synechococcu...   127   1e-27
gi|38106470|gb|EAA52772.1| hypothetical protein MG05900.4 [Magna...   127   1e-27
gi|50306067|ref|XP_452995.1| unnamed protein product [Kluyveromy...   127   2e-27
gi|50256675|gb|EAL19398.1| hypothetical protein CNBH0910 [Crypto...   127   2e-27
gi|28574898|ref|NP_648818.3| CG5931-PA [Drosophila melanogaster]...   126   2e-27
gi|50424241|ref|XP_460707.1| unnamed protein product [Debaryomyc...   126   3e-27
gi|50307187|ref|XP_453572.1| unnamed protein product [Kluyveromy...   125   4e-27
gi|50293751|ref|XP_449287.1| unnamed protein product [Candida gl...   125   5e-27
gi|50426987|ref|XP_462098.1| unnamed protein product [Debaryomyc...   124   1e-26
gi|46227057|gb|EAK88007.1| U5snrp Brr2 SFII RNA helicase (sec63 ...   123   2e-26
gi|33241070|ref|NP_876012.1| Superfamily II RNA helicase [Prochl...   123   3e-26
gi|15485409|emb|CAC67631.1| probable DEAD/DEAH box helicase [Lei...   123   3e-26
gi|47213176|emb|CAF92185.1| unnamed protein product [Tetraodon n...   121   1e-25
gi|33863754|ref|NP_895314.1| putative DNA helicase [Prochlorococ...   120   1e-25
gi|46442828|gb|EAL02114.1| hypothetical protein CaO19.810 [Candi...   120   2e-25
gi|48892215|ref|ZP_00325613.1| COG4581: Superfamily II RNA helic...   120   2e-25
gi|17537127|ref|NP_496710.1| u5 small nuclear ribonucleoprotein ...   120   2e-25
gi|47678999|dbj|BAD20688.1| mer3 [Coprinopsis cinerea]                119   4e-25
gi|38106724|gb|EAA52996.1| hypothetical protein MG06124.4 [Magna...   119   5e-25
gi|20094271|ref|NP_614118.1| Archaea-specific Superfamily II hel...   118   7e-25
gi|15678832|ref|NP_275949.1| DNA helicase related protein [Metha...   118   7e-25
gi|31242979|ref|XP_321922.1| ENSANGP00000013875 [Anopheles gambi...   118   9e-25
gi|14043179|gb|AAH07577.1| Unknown (protein for IMAGE:3139787) [...   118   9e-25
gi|47571734|ref|ZP_00241783.1| COG1204: Superfamily II helicase ...   117   1e-24
gi|46124035|ref|XP_386571.1| hypothetical protein FG06395.1 [Gib...   117   2e-24
gi|39592373|emb|CAE63450.1| Hypothetical protein CBG07909 [Caeno...   116   3e-24
gi|50763964|ref|XP_422924.1| PREDICTED: similar to Putative U5 s...   115   6e-24
gi|50256319|gb|EAL19044.1| hypothetical protein CNBH1460 [Crypto...   115   6e-24
gi|32416990|ref|XP_328973.1| hypothetical protein [Neurospora cr...   115   7e-24
gi|33862023|ref|NP_893584.1| putative DNA helicase [Prochlorococ...   114   1e-23
gi|23478915|gb|EAA15876.1| Drosophila melanogaster CG5931 gene p...   114   2e-23
gi|17537519|ref|NP_497062.1| DEAD/DEAH box helicase and Sec63 do...   113   2e-23
gi|50546779|ref|XP_500859.1| hypothetical protein [Yarrowia lipo...   113   2e-23
gi|30697481|ref|NP_200922.2| DEAD box RNA helicase, putative [Ar...   113   3e-23
gi|9759460|dbj|BAB10376.1| RNA helicase [Arabidopsis thaliana]        113   3e-23
gi|23126945|ref|ZP_00108825.1| COG4581: Superfamily II RNA helic...   113   3e-23
gi|50287917|ref|XP_446387.1| unnamed protein product [Candida gl...   112   4e-23
gi|49073524|ref|XP_400974.1| hypothetical protein UM03359.1 [Ust...   112   4e-23
gi|41718942|ref|ZP_00147887.1| COG1202: Superfamily II helicase,...   112   4e-23
gi|49090296|ref|XP_406619.1| hypothetical protein AN2482.2 [Aspe...   112   4e-23
gi|37522164|ref|NP_925541.1| probable helicase [Gloeobacter viol...   112   5e-23
gi|20141917|sp|P42285|K052_HUMAN Protein KIAA0052 >gnl|BL_ORD_ID...   112   6e-23
gi|21312352|ref|NP_082427.1| RIKEN cDNA 2610528A15 [Mus musculus...   112   6e-23
gi|22297893|ref|NP_681140.1| ORF_ID:tlr0350~putative helicase [T...   112   6e-23
gi|39930353|ref|NP_056175.2| KIAA0052 [Homo sapiens] >gnl|BL_ORD...   112   6e-23
gi|37590539|gb|AAH59917.1| Helic1 protein [Mus musculus]              112   6e-23
gi|40850929|gb|AAH65258.1| KIAA0052 protein [Homo sapiens]            112   6e-23
gi|34783228|gb|AAH28604.2| KIAA0052 protein [Homo sapiens]            112   6e-23
gi|38090459|ref|XP_125617.2| RIKEN cDNA B630009I04 [Mus musculus]     112   6e-23
gi|26353436|dbj|BAC40348.1| unnamed protein product [Mus musculus]    112   6e-23
gi|19113352|ref|NP_596560.1| DEAD box helicase; with strong simi...   111   8e-23
gi|46135421|ref|ZP_00162841.2| COG4581: Superfamily II RNA helic...   111   8e-23
gi|50744652|ref|XP_419816.1| PREDICTED: similar to helicase, ATP...   111   8e-23
gi|45358847|ref|NP_988404.1| DEAD/DEAH box helicase:Helicase, C-...   111   1e-22
gi|26346947|dbj|BAC37122.1| unnamed protein product [Mus musculus]    110   1e-22
gi|17227985|ref|NP_484533.1| putative helicase [Nostoc sp. PCC 7...   110   1e-22
gi|49067214|ref|XP_397897.1| hypothetical protein UM00282.1 [Ust...   110   2e-22
gi|1143249|gb|AAC49699.1| G9365 ORF                                   110   2e-22
gi|6321710|ref|NP_011787.1| SKI2-like helicase; Slh1p [Saccharom...   110   2e-22
gi|12061185|gb|AAG45474.1| ASC-1 complex subunit P200 [Homo sapi...   109   3e-22
gi|24307917|ref|NP_006819.1| activating signal cointegrator 1 co...   109   3e-22
gi|50400552|sp|Q8N3C0|HEL1_HUMAN Activating signal cointegrator ...   109   3e-22
gi|2842424|emb|CAA11679.1| RNA helicase [Homo sapiens]                109   3e-22
gi|46227805|gb|EAK88725.1| U5 small nuclear ribonucleoprotein 20...   109   3e-22
gi|22091415|gb|AAL69489.2| putative RNA helicase [Arabidopsis th...   108   7e-22
gi|19114484|ref|NP_593572.1| putative helicase [Schizosaccharomy...   108   7e-22
gi|34853214|ref|XP_228345.2| similar to RNA helicase family [Rat...   108   7e-22
gi|39583072|emb|CAE60612.1| Hypothetical protein CBG04253 [Caeno...   107   1e-21
gi|38233827|ref|NP_939594.1| Putative helicase [Corynebacterium ...   107   2e-21
gi|50550521|ref|XP_502733.1| hypothetical protein [Yarrowia lipo...   107   2e-21
gi|47550803|ref|NP_999933.1| zgc:63838 [Danio rerio] >gnl|BL_ORD...   106   3e-21
gi|46432976|gb|EAK92435.1| hypothetical protein CaO19.8915 [Cand...   106   3e-21
gi|50419435|ref|XP_458244.1| unnamed protein product [Debaryomyc...   106   3e-21
gi|17864608|ref|NP_524929.1| CG4152-PA [Drosophila melanogaster]...   106   3e-21
gi|28829653|gb|AAO52169.1| similar to Homo sapiens (Human). Hypo...   106   3e-21
gi|9294478|dbj|BAB02697.1| helicase-like protein [Arabidopsis th...   105   8e-21
gi|45185372|ref|NP_983089.1| ABR142Wp [Eremothecium gossypii] >g...   105   8e-21
gi|46109548|ref|XP_381832.1| hypothetical protein FG01656.1 [Gib...   104   1e-20
gi|50843573|ref|YP_056800.1| DeaD/DeaH box helicase [Propionibac...   104   1e-20
gi|25307597|pir||B84481 hypothetical protein At2g06990 [imported...   104   1e-20
gi|46443831|gb|EAL03110.1| hypothetical protein CaO19.3980 [Cand...   104   1e-20
gi|50290975|ref|XP_447920.1| unnamed protein product [Candida gl...   104   1e-20
gi|38103480|gb|EAA50172.1| hypothetical protein MG03931.4 [Magna...   104   1e-20
gi|16024936|gb|AAL11446.1| HUA enhancer 2 [Arabidopsis thaliana]      103   2e-20
gi|18396436|ref|NP_565338.1| HUA enhancer 2 (HEN2) / DExH-box RN...   103   2e-20
gi|50751330|ref|XP_422348.1| PREDICTED: similar to hypothetical ...   103   2e-20
gi|50302989|ref|XP_451432.1| unnamed protein product [Kluyveromy...   103   2e-20
gi|16753094|ref|NP_445672.1| putative helicase [Sulfolobus islan...   103   3e-20
gi|46129815|ref|ZP_00164418.2| COG4581: Superfamily II RNA helic...   102   4e-20
gi|14589999|ref|NP_142063.1| hypothetical protein PH0044 [Pyroco...   102   4e-20
gi|31231980|ref|XP_318627.1| ENSANGP00000020973 [Anopheles gambi...   102   4e-20
gi|39585779|emb|CAE59981.1| Hypothetical protein CBG03473 [Caeno...   102   4e-20
gi|14520271|ref|NP_125746.1| ATP-dependent RNA helicase, putativ...   102   5e-20
gi|46390556|dbj|BAD16042.1| putative helicase [Oryza sativa (jap...   102   7e-20
gi|6322411|ref|NP_012485.1| Dead-box family helicase required fo...   102   7e-20
gi|23509592|ref|NP_702259.1| RNA helicase, putative [Plasmodium ...   102   7e-20
gi|15223032|ref|NP_177164.1| DEAD/DEAH box helicase, putative [A...   100   1e-19
gi|19074505|ref|NP_586011.1| HFM1-LIKE ATP-DEPENDENT RNA HELICAS...   100   1e-19
gi|19552703|ref|NP_600705.1| putative helicase [Corynebacterium ...   100   2e-19
gi|14423540|gb|AAK62452.1| Similar to Synechocystis antiviral pr...   100   2e-19
gi|15606531|ref|NP_213911.1| hypothetical protein aq_1328 [Aquif...   100   2e-19
gi|45190426|ref|NP_984680.1| AEL181Cp [Eremothecium gossypii] >g...   100   2e-19
gi|30017579|gb|AAP13001.1| putative Sec63 domain containing prot...   100   2e-19
gi|18976425|ref|NP_577782.1| putative ATP dependent RNA helicase...   100   2e-19
gi|47208140|emb|CAF92300.1| unnamed protein product [Tetraodon n...   100   3e-19
gi|19074207|ref|NP_584813.1| ATP-DEPENDENT RNA HELICASE (SKI2 FA...   100   3e-19
gi|46190308|ref|ZP_00121668.2| COG4581: Superfamily II RNA helic...   100   3e-19
gi|23464656|ref|NP_695259.1| probable DEAD box-like helicase [Bi...   100   3e-19
gi|48836633|ref|ZP_00293629.1| COG4581: Superfamily II RNA helic...   100   3e-19
gi|49094176|ref|XP_408549.1| hypothetical protein AN4412.2 [Aspe...   100   3e-19
gi|29247934|gb|EAA39482.1| GLP_26_39935_43720 [Giardia lamblia A...   100   3e-19
gi|29245089|gb|EAA36750.1| GLP_83_12455_16540 [Giardia lamblia A...    99   4e-19
gi|15218905|ref|NP_176185.1| ATP-dependent RNA helicase, putativ...    99   4e-19
gi|25028372|ref|NP_738426.1| putative helicase [Corynebacterium ...    99   4e-19
gi|49069620|ref|XP_399099.1| hypothetical protein UM01484.1 [Ust...    99   4e-19
gi|19114214|ref|NP_593302.1| DEAD box helicase [Schizosaccharomy...    99   4e-19
gi|50310243|ref|XP_455141.1| unnamed protein product [Kluyveromy...    99   6e-19
gi|23478640|gb|EAA15672.1| RNA helicase-related [Plasmodium yoel...    99   7e-19
gi|50427633|ref|XP_462429.1| unnamed protein product [Debaryomyc...    99   7e-19
gi|32404016|ref|XP_322621.1| hypothetical protein [Neurospora cr...    98   9e-19
gi|19553128|ref|NP_601130.1| putative helicase [Corynebacterium ...    98   1e-18
gi|17542826|ref|NP_501757.1| DEAD/DEAH box helicase and helicase...    98   1e-18
gi|7469100|pir||T17399 probable DEAH ATP-dependent helicase vrlS...    98   1e-18
gi|48838250|ref|ZP_00295196.1| COG1202: Superfamily II helicase,...    97   2e-18
gi|20090271|ref|NP_616346.1| hypothetical protein (multi-domain)...    97   3e-18
gi|46228571|gb|EAK89441.1| Mtr4p like SKI family SFII helicase [...    97   3e-18
gi|50842859|ref|YP_056086.1| superfamily II RNA helicase [Propio...    97   3e-18
gi|46364734|ref|ZP_00227318.1| COG4581: Superfamily II RNA helic...    96   6e-18
gi|23612103|ref|NP_703683.1| ATP dependent RNA helicase, putativ...    96   6e-18
gi|15669591|ref|NP_248404.1| putative ATP dependent RNA helicase...    95   1e-17
gi|32474758|ref|NP_867752.1| putative helicase [Pirellula sp. 1]...    95   1e-17
gi|23112333|ref|ZP_00097831.1| COG4581: Superfamily II RNA helic...    95   1e-17
gi|9631809|ref|NP_048589.1| contains ATP-GTP binding motif; simi...    95   1e-17
gi|23488188|gb|EAA21253.1| Homo sapiens KIAA0052 protein-related...    94   1e-17
gi|15609229|ref|NP_216608.1| helY [Mycobacterium tuberculosis H3...    94   2e-17
gi|50258745|gb|EAL21430.1| hypothetical protein CNBD1250 [Crypto...    94   2e-17
gi|31793275|ref|NP_855768.1| PROBABLE ATP-DEPENDENT DNA HELICASE...    94   2e-17
gi|27464957|gb|AAN64234.1| DNA polymerase theta short isoform [M...    94   2e-17
gi|38234003|ref|NP_939770.1| Putative helicase [Corynebacterium ...    93   3e-17
gi|29833237|ref|NP_827871.1| putative ATP-dependent RNA helicase...    93   4e-17
gi|34879722|ref|XP_214002.2| similar to DNA helicase HEL308 [Rat...    92   9e-17
gi|21228482|ref|NP_634404.1| ATP-dependent DNA helicase [Methano...    91   1e-16
gi|21219665|ref|NP_625444.1| putative helicase [Streptomyces coe...    91   2e-16
gi|29828116|ref|NP_822750.1| putative ATP-dependent helicase [St...    90   3e-16
gi|17933658|ref|NP_524465.1| CG10210-PA [Drosophila melanogaster...    90   3e-16
gi|13446608|emb|CAC35050.1| putative helicase Ski2 [Drosophila m...    90   3e-16
gi|15827694|ref|NP_301957.1| probable helicase, Ski2 subfamily [...    89   7e-16
gi|21220127|ref|NP_625906.1| putative helicase [Streptomyces coe...    89   7e-16
gi|15920324|ref|NP_375993.1| 621aa long conserved hypothetical p...    88   1e-15
gi|37927528|gb|AAP70293.1| helicase-like protein [Escherichia coli]    87   2e-15
gi|39104516|dbj|BAC97855.2| mKIAA0052 protein [Mus musculus]           87   2e-15
gi|19074168|ref|NP_584774.1| putative ATP-DEPENDENT RNA HELICASE...    87   2e-15
gi|28828578|gb|AAO51181.1| similar to putative DEAD/DEAH box hel...    87   3e-15
gi|41407926|ref|NP_960762.1| HelY [Mycobacterium avium subsp. pa...    87   3e-15
gi|23509456|ref|NP_702123.1| DNA-directed DNA polymerase, putati...    87   3e-15
gi|49065250|emb|CAG38619.1| putative helicase AshA [Haloferax vo...    86   4e-15
gi|46363002|ref|ZP_00225798.1| COG4581: Superfamily II RNA helic...    86   4e-15
gi|23510204|ref|NP_702870.1| u5 small nuclear ribonucleoprotein-...    86   5e-15
gi|10946650|ref|NP_067312.1| superkiller viralicidic activity 2-...    86   6e-15
gi|1754827|gb|AAB52523.1| helicase-like protein [Homo sapiens]         86   6e-15
gi|26325700|dbj|BAC26604.1| unnamed protein product [Mus musculus]     86   6e-15
gi|42406362|gb|AAH65999.1| Skiv2l protein [Mus musculus]               86   6e-15
gi|34852185|ref|XP_215327.2| similar to superkiller viralicidic ...    85   8e-15
gi|1362811|pir||S56752 helicase SKI2W - human >gnl|BL_ORD_ID|342...    85   8e-15
gi|47087109|ref|NP_998724.1| superkiller viralicidic activity 2-...    85   8e-15
gi|7671650|emb|CAB89307.1| dJ34F7.7 (superkiller viralicidic act...    85   1e-14
gi|3123284|sp|Q15477|SKIW_HUMAN Helicase SKI2W (Helicase-like pr...    85   1e-14
gi|2347134|gb|AAB67978.1| helicase [Homo sapiens]                      85   1e-14
gi|1403336|emb|CAA67024.1| SKI2W protein [Homo sapiens]                85   1e-14
gi|20631987|ref|NP_008860.3| superkiller viralicidic activity 2-...    85   1e-14
gi|3395783|gb|AAC78607.1| putative RNA helicase Ski2w [Homo sapi...    85   1e-14
gi|50289393|ref|XP_447128.1| unnamed protein product [Candida gl...    84   1e-14
gi|15678683|ref|NP_275798.1| ATP-dependent RNA helicase related ...    84   2e-14
gi|37678453|ref|NP_933062.1| hypothetical protein VV0269 [Vibrio...    84   2e-14
gi|13812405|ref|NP_113523.1| putative U5 snRNP-specific protein ...    83   3e-14
gi|16332264|ref|NP_442992.1| antiviral protein [Synechocystis sp...    83   3e-14
gi|19075595|ref|NP_588095.1| putative DEAD/DEAH box helicase [Sc...    83   4e-14
gi|50761476|ref|XP_424729.1| PREDICTED: similar to RIKEN cDNA 26...    82   7e-14
gi|15928685|gb|AAH14810.1| 2610528A15Rik protein [Mus musculus]        82   9e-14
gi|15791004|ref|NP_280828.1| DNA repair protein; Rad24a [Halobac...    81   2e-13
gi|17861876|gb|AAL39415.1| GM09620p [Drosophila melanogaster]          81   2e-13
gi|34783197|gb|AAH14669.2| KIAA0052 protein [Homo sapiens]             80   2e-13
gi|13812112|ref|NP_113239.1| putative helicase-like protein [Gui...    80   2e-13
gi|5114047|gb|AAD40191.1| putative RNA helicase [Homo sapiens]         79   5e-13
gi|50794619|ref|XP_428025.1| PREDICTED: similar to U5 snRNP-spec...    79   5e-13
gi|47219912|emb|CAF97182.1| unnamed protein product [Tetraodon n...    79   5e-13
gi|46120966|ref|ZP_00201875.1| COG1204: Superfamily II helicase ...    79   8e-13
gi|50303465|ref|XP_451674.1| unnamed protein product [Kluyveromy...    79   8e-13
gi|37575519|gb|AAQ93515.1| putative helicase [Streptomyces clavu...    78   1e-12
gi|42779931|ref|NP_977178.1| DEAD/DEAH box helicase domain prote...    78   1e-12
gi|23483450|gb|EAA19114.1| DNA helicase [Plasmodium yoelii yoelii]     77   2e-12
gi|49096382|ref|XP_409651.1| hypothetical protein AN5514.2 [Aspe...    77   3e-12
gi|17539644|ref|NP_502084.1| DEAD/DEAH box helicase and helicase...    77   3e-12
gi|50408898|ref|XP_456821.1| unnamed protein product [Debaryomyc...    76   5e-12
gi|39593718|emb|CAE62010.1| Hypothetical protein CBG06018 [Caeno...    76   5e-12
gi|25406029|pir||D96723 hypothetical protein F20P5.20 [imported]...    75   7e-12
gi|34878039|ref|XP_224795.2| similar to Hypothetical protein FLJ...    75   1e-11
gi|23478020|gb|EAA15221.1| antiviral protein ski2 [Plasmodium yo...    74   2e-11
gi|25169065|emb|CAD47901.1| DNA helicase-like protein [Arthrobac...    73   3e-11
gi|4759030|ref|NP_004251.1| RecQ protein-like 4; RecQ protein 4 ...    73   3e-11
gi|48839782|ref|ZP_00296712.1| COG1204: Superfamily II helicase ...    73   4e-11
gi|46437839|gb|EAK97179.1| hypothetical protein CaO19.13783 [Can...    72   6e-11
gi|48140560|ref|XP_397131.1| similar to CG10210-PA [Apis mellifera]    72   7e-11
gi|6323430|ref|NP_013502.1| blocks translation of non-poly(A) mR...    72   9e-11
gi|49067436|ref|XP_398008.1| hypothetical protein UM00393.1 [Ust...    72   9e-11
gi|29725619|ref|NP_060101.2| hypothetical protein FLJ20035 [Homo...    71   1e-10
gi|25028174|ref|NP_738228.1| putative helicase [Corynebacterium ...    71   1e-10
gi|32417138|ref|XP_329047.1| hypothetical protein [Neurospora cr...    70   2e-10
gi|27464955|gb|AAN64235.1| DNA polymerase theta isoform 1 [Mus m...    70   3e-10
gi|5541663|emb|CAB51169.1| putative helicase, fragment [Arabidop...    70   3e-10
gi|15232685|ref|NP_190280.1| DEAD/DEAH box helicase, putative [A...    70   3e-10
gi|50285719|ref|XP_445288.1| unnamed protein product [Candida gl...    70   3e-10
gi|50256433|gb|EAL19158.1| hypothetical protein CNBH2570 [Crypto...    70   3e-10
gi|46111799|ref|XP_382957.1| hypothetical protein FG02781.1 [Gib...    70   4e-10
gi|47209207|emb|CAF93355.1| unnamed protein product [Tetraodon n...    69   5e-10
gi|17552356|ref|NP_498283.1| DEAD/DEAH box helicase and helicase...    69   8e-10
gi|23613618|ref|NP_704639.1| helicase with Zn-finger motif, puta...    69   8e-10
gi|48837292|ref|ZP_00294287.1| COG4581: Superfamily II RNA helic...    69   8e-10
gi|25395773|pir||A88470 protein C28H8.3 [imported] - Caenorhabdi...    69   8e-10
gi|47095885|ref|ZP_00233489.1| DEAD/DEAH box helicase domain pro...    68   1e-09
gi|15920172|ref|NP_375841.1| 949aa long hypothetical protein [Su...    68   1e-09
gi|23335111|ref|ZP_00120349.1| COG4581: Superfamily II RNA helic...    68   1e-09
gi|23465319|ref|NP_695922.1| probable helicase [Bifidobacterium ...    68   1e-09
gi|49097368|ref|XP_410144.1| hypothetical protein AN6007.2 [Aspe...    68   1e-09
gi|21230746|ref|NP_636663.1| helicase-related protein [Xanthomon...    68   1e-09
gi|32406424|ref|XP_323825.1| hypothetical protein [Neurospora cr...    68   1e-09
gi|38099821|gb|EAA47106.1| hypothetical protein MG10929.4 [Magna...    68   1e-09
gi|50543746|ref|XP_500039.1| hypothetical protein [Yarrowia lipo...    68   1e-09
gi|30017365|ref|NP_835163.1| superkiller viralicidic activity 2-...    67   2e-09
gi|45190673|ref|NP_984927.1| AER067Cp [Eremothecium gossypii] >g...    67   2e-09
gi|29247933|gb|EAA39481.1| GLP_26_36454_39915 [Giardia lamblia A...    67   2e-09
gi|16081894|ref|NP_394298.1| Large helicase related protein [The...    67   2e-09
gi|19484182|gb|AAH23478.1| Skiv2l protein [Mus musculus]               67   2e-09
gi|33861285|ref|NP_892846.1| DEAD/DEAH box helicase:Helicase C-t...    67   2e-09
gi|48851780|ref|ZP_00305977.1| COG1201: Lhr-like helicases [Ferr...    67   3e-09
gi|21242093|ref|NP_641675.1| helicase-related protein [Xanthomon...    67   3e-09
gi|46226293|gb|EAK87306.1| mRNA translation inhibitor SKI2 SFII ...    66   4e-09
gi|38111296|gb|EAA56895.1| hypothetical protein MG07250.4 [Magna...    66   4e-09
gi|39584934|emb|CAE64358.1| Hypothetical protein CBG09045 [Caeno...    66   4e-09
gi|21358123|ref|NP_652607.1| CG7487-PA [Drosophila melanogaster]...    65   7e-09
gi|7229681|gb|AAF42939.1| RECQ4 [Drosophila melanogaster]              65   7e-09
gi|6323844|ref|NP_013915.1| Nucleolar DNA helicase of the RecQ f...    65   9e-09
gi|38014099|gb|AAH11602.2| RECQL4 protein [Homo sapiens]               65   9e-09
gi|48097430|ref|XP_393782.1| similar to ENSANGP00000004546 [Apis...    65   1e-08
gi|19173634|ref|NP_597437.1| putative RNA HELICASE OF THE SKI2 S...    65   1e-08
gi|50543658|ref|XP_499995.1| hypothetical protein [Yarrowia lipo...    65   1e-08
gi|21619317|gb|AAH31779.1| KIAA0052 protein [Homo sapiens]             64   2e-08
gi|50251266|dbj|BAD28046.1| putative Helicase SKI2W [Oryza sativ...    64   2e-08
gi|48836470|ref|ZP_00293466.1| COG1201: Lhr-like helicases [Ther...    64   2e-08
gi|410320|gb|AAA35049.1| antiviral protein                             64   2e-08
gi|15232253|ref|NP_189410.1| ATP-dependent DNA helicase, putativ...    64   3e-08
gi|13541648|ref|NP_111336.1| Lhr-like helicase [Thermoplasma vol...    64   3e-08
gi|23002289|ref|ZP_00045967.1| COG0514: Superfamily II DNA helic...    63   3e-08
gi|48840482|ref|ZP_00297409.1| COG1201: Lhr-like helicases [Meth...    63   4e-08
gi|19115394|ref|NP_594482.1| putative helicase [Schizosaccharomy...    63   4e-08
gi|31207827|ref|XP_312880.1| ENSANGP00000014710 [Anopheles gambi...    62   6e-08
gi|41409513|ref|NP_962349.1| Lhr [Mycobacterium avium subsp. par...    62   7e-08
gi|31794476|ref|NP_856969.1| PROBABLE ATP-DEPENDENT HELICASE LHR...    62   7e-08
gi|15610432|ref|NP_217813.1| lhr [Mycobacterium tuberculosis H37...    62   7e-08
gi|46092353|dbj|BAD14289.1| RecQ helicase protein-like 4 [Mus mu...    62   1e-07
gi|32189764|ref|NP_859494.1| helicase 2 [Leishmania major] >gnl|...    62   1e-07
gi|46227112|gb|EAK88062.1| SPAC694.02. SKI family SFII helicase ...    61   1e-07
gi|39584970|emb|CAE64394.1| Hypothetical protein CBG09084 [Caeno...    61   1e-07
gi|15897328|ref|NP_341933.1| ATP-dependent helicase [Sulfolobus ...    61   1e-07
gi|48478266|ref|YP_023972.1| ATP-dependent RNA helicase [Picroph...    61   1e-07
gi|46137087|ref|XP_390235.1| hypothetical protein FG10059.1 [Gib...    61   1e-07
gi|32476457|ref|NP_869451.1| recQ [Pirellula sp. 1] >gnl|BL_ORD_...    61   2e-07
gi|21224937|ref|NP_630716.1| putative ATP-dependent helicase [St...    61   2e-07
gi|3043527|emb|CAA11251.1| helicase [Streptomyces avermitilis] >...    61   2e-07
gi|46446583|ref|YP_007948.1| conserved hypothetical protein [Par...    60   2e-07
gi|26333341|dbj|BAC30388.1| unnamed protein product [Mus musculus]     60   2e-07
gi|49065248|emb|CAG38618.1| putative helicase Lhr [Haloferax vol...    60   3e-07
gi|32474001|ref|NP_866995.1| ATP-dependent DNA helicase RecQ [Pi...    60   3e-07
gi|46142674|ref|ZP_00204383.1| COG1201: Lhr-like helicases [Meth...    60   4e-07
gi|37528437|ref|NP_931782.1| ATP-dependent DNA helicase RecQ [Ph...    60   4e-07
gi|32266919|ref|NP_860951.1| hypothetical protein [Helicobacter ...    60   4e-07
gi|31196541|ref|XP_307218.1| ENSANGP00000014603 [Anopheles gambi...    60   4e-07
gi|45198362|ref|NP_985391.1| AFL159Wp [Eremothecium gossypii] >g...    59   5e-07
gi|50123092|ref|YP_052259.1| ATP-dependent DNA helicase [Erwinia...    59   6e-07
gi|34875972|ref|XP_223148.2| similar to CG5205-PA [Rattus norveg...    59   6e-07
gi|41614798|ref|NP_963296.1| NEQ003 [Nanoarchaeum equitans Kin4-...    59   6e-07
gi|13541476|ref|NP_111164.1| Helicase (Lhr-related) [Thermoplasm...    59   6e-07
gi|16081689|ref|NP_394061.1| hypothetical protein [Thermoplasma ...    59   8e-07
gi|18977423|ref|NP_578780.1| large helicase-related protein [Pyr...    59   8e-07
gi|42519100|ref|NP_965030.1| ATP-dependent DNA helicase RecQ [La...    59   8e-07
gi|46229735|gb|EAK90553.1| possible helicase [Cryptosporidium pa...    59   8e-07
gi|28899781|ref|NP_799386.1| ATP-dependent DNA helicase RecQ [Vi...    59   8e-07
gi|48891378|ref|ZP_00324902.1| COG0514: Superfamily II DNA helic...    59   8e-07
gi|46438756|gb|EAK98082.1| hypothetical protein CaO19.12795 [Can...    58   1e-06
gi|48869941|ref|ZP_00322675.1| COG0514: Superfamily II DNA helic...    58   1e-06
gi|46191702|ref|ZP_00008225.2| COG0210: Superfamily I DNA and RN...    58   1e-06
gi|31215022|ref|XP_315948.1| ENSANGP00000004546 [Anopheles gambi...    58   1e-06
gi|50782466|ref|XP_427538.1| PREDICTED: similar to ATP-dependent...    58   1e-06
gi|17537131|ref|NP_496712.1| predicted CDS, u5 small nuclear rib...    58   1e-06
gi|16130545|ref|NP_417116.1| orf, hypothetical protein; CP4-57 p...    58   1e-06
gi|14521327|ref|NP_126802.1| large helicase-related protein [Pyr...    57   2e-06
gi|20089647|ref|NP_615722.1| ATP-dependent DNA helicase [Methano...    57   2e-06
gi|29829042|ref|NP_823676.1| putative ATP-dependent DNA helicase...    57   3e-06
gi|50557416|ref|XP_506116.1| hypothetical protein [Yarrowia lipo...    56   4e-06
gi|48783453|ref|ZP_00279905.1| COG1201: Lhr-like helicases [Burk...    56   4e-06
gi|21228019|ref|NP_633941.1| ATP-dependent RNA helicase [Methano...    56   4e-06
gi|18313118|ref|NP_559785.1| ATP-dependent helicase, putative [P...    56   4e-06
gi|9945008|gb|AAG03075.1| Sgs1p [Candida albicans]                     56   4e-06
gi|15897072|ref|NP_341677.1| ATP-dependent helicase [Sulfolobus ...    56   5e-06
gi|23308807|ref|NP_600075.2| Lhr-like helicase [Corynebacterium ...    56   5e-06
gi|50292717|ref|XP_448791.1| unnamed protein product [Candida gl...    55   7e-06
gi|16123968|ref|NP_407281.1| ATP-dependent DNA helicase [Yersini...    55   7e-06
gi|21955293|gb|AAL24152.2| putative ATP-dependent RNA helicase [...    55   7e-06
gi|45358704|ref|NP_988261.1| Lhr-like RNA helicase [Methanococcu...    55   9e-06
gi|7715993|gb|AAF68240.1| seroreactive antigen BMN1-5B [Babesia ...    55   9e-06
gi|29376108|ref|NP_815262.1| ATP-dependent DNA helicase RecQ [En...    55   1e-05
gi|16801122|ref|NP_471390.1| similar to ATP-dependent DNA helica...    55   1e-05
gi|47093371|ref|ZP_00231138.1| ATP-dependent DNA helicase RecQ, ...    55   1e-05
gi|42524591|ref|NP_969971.1| ATP-dependent DNA helicase RecQ [Bd...    55   1e-05
gi|15614170|ref|NP_242473.1| ATP-dependent DNA helicase [Bacillu...    54   2e-05
gi|11931717|emb|CAC19131.1| putative DNA helicase [Ascovirus DpAV4]    54   2e-05
gi|16079280|ref|NP_390104.1| yprA [Bacillus subtilis subsp. subt...    54   2e-05
gi|49076680|ref|XP_402288.1| hypothetical protein UM04673.1 [Ust...    54   2e-05
gi|46908175|ref|YP_014564.1| ATP-dependent DNA helicase RecQ, pu...    54   2e-05
gi|20094471|ref|NP_614318.1| Lhr-like Superfamily II helicase [M...    54   2e-05
gi|50746188|ref|XP_420395.1| PREDICTED: similar to hypothetical ...    54   3e-05
gi|11498749|ref|NP_069978.1| large helicase-related protein (lhr...    54   3e-05
gi|39581922|emb|CAE72884.1| Hypothetical protein CBG20197 [Caeno...    54   3e-05
gi|45527462|ref|ZP_00178662.1| COG4581: Superfamily II RNA helic...    53   5e-05
gi|50120523|ref|YP_049690.1| probable ATP-dependent helicase [Er...    53   5e-05
gi|28378326|ref|NP_785218.1| ATP-dependent DNA helicase RecG [La...    52   6e-05
gi|17555440|ref|NP_498250.1| dna polymerase i (3G882) [Caenorhab...    52   6e-05
gi|18313289|ref|NP_559956.1| ATP-dependent helicase [Pyrobaculum...    52   6e-05
gi|16803981|ref|NP_465466.1| similar to ATP-dependent DNA helica...    52   6e-05
gi|6714387|gb|AAF26076.1| putative DNA helicase [Arabidopsis tha...    52   8e-05
gi|17313266|ref|NP_478121.1| RecQ protein-like 4 [Mus musculus] ...    52   8e-05
gi|42600546|dbj|BAD11131.1| RecQ4 homolog [Mus musculus]               52   8e-05
gi|18309325|ref|NP_561259.1| ATP-dependent DNA helicase [Clostri...    52   8e-05
gi|30679600|ref|NP_187225.2| DNA helicase (RECQI1) [Arabidopsis ...    52   8e-05
gi|47097085|ref|ZP_00234655.1| ATP-dependent DNA helicase RecQ, ...    52   8e-05
gi|15679790|ref|NP_276908.1| ATP-dependent helicase [Methanother...    52   8e-05
gi|48855742|ref|ZP_00309900.1| COG0514: Superfamily II DNA helic...    52   8e-05
gi|50258318|gb|EAL21009.1| hypothetical protein CNBD6100 [Crypto...    52   1e-04
gi|34854226|ref|XP_345154.1| similar to RIKEN cDNA 2610528A15 [R...    52   1e-04
gi|24380195|ref|NP_722150.1| putative ATP-dependent DNA helicase...    52   1e-04
gi|37681371|ref|NP_935980.1| ATP-dependent DNA helicase RecQ [Vi...    51   1e-04
gi|15640226|ref|NP_229853.1| ATP-dependent DNA helicase RecQ [Vi...    51   1e-04
gi|48870743|ref|ZP_00323462.1| COG0514: Superfamily II DNA helic...    50   2e-04
gi|29653815|ref|NP_819507.1| ATP-dependent DNA helicase RecQ [Co...    50   2e-04
gi|29248002|gb|EAA39547.1| GLP_203_39082_40998 [Giardia lamblia ...    50   2e-04
gi|27364385|ref|NP_759913.1| ATP-dependent DNA helicase RecQ [Vi...    50   2e-04
gi|30261580|ref|NP_843957.1| ATP-dependent DNA helicase RecQ [Ba...    50   2e-04
gi|49481046|ref|YP_035701.1| ATP-dependent DNA helicase RecQ [Ba...    50   2e-04
gi|16930459|gb|AAL31915.1| At1g20960/F9H16_5 [Arabidopsis thalia...    50   3e-04
gi|42780684|ref|NP_977931.1| ATP-dependent DNA helicase [Bacillu...    50   3e-04
gi|13473449|ref|NP_105016.1| DNA helicase RecQ [Mesorhizobium lo...    50   3e-04
gi|30019633|ref|NP_831264.1| ATP-dependent DNA helicase recQ [Ba...    50   3e-04
gi|46199197|ref|YP_004864.1| probable ATP-dependent helicase lhr...    50   4e-04
gi|14521025|ref|NP_126500.1| large helicase-related protein [Pyr...    50   4e-04
gi|23613555|ref|NP_704576.1| DEAD/DEAH box helicase, putative [P...    50   4e-04
gi|15790306|ref|NP_280130.1| ATP-dependent helicase; HelA [Halob...    50   4e-04
gi|15678340|ref|NP_275455.1| ATP-dependent helicase [Methanother...    50   4e-04
gi|46187699|ref|ZP_00205433.1| COG0210: Superfamily I DNA and RN...    50   4e-04
gi|7498166|pir||T20332 hypothetical protein D2005.5 - Caenorhabd...    49   5e-04
gi|38422755|emb|CAB02082.3| Hypothetical protein D2005.5 [Caenor...    49   5e-04
gi|14591140|ref|NP_143216.1| ATP-dependent helicase [Pyrococcus ...    49   5e-04
gi|21228658|ref|NP_634580.1| ATP-dependent RNA helicase [Methano...    49   5e-04
gi|34866877|ref|XP_216973.2| similar to RecQ helicase protein-li...    49   5e-04
gi|25141406|ref|NP_492161.2| RNA helicase (1I401) [Caenorhabditi...    49   5e-04
gi|46915004|emb|CAG21779.1| putative ATP-dependent DNA helicase ...    49   5e-04
gi|28378538|ref|NP_785430.1| ATP-dependent DNA helicase RecQ [La...    49   7e-04
gi|13474670|ref|NP_106239.1| probable ATP dependent DNA helicase...    49   7e-04
gi|42525842|ref|NP_970940.1| ATP-dependent DNA helicase RecQ [Tr...    49   9e-04
gi|5410428|gb|AAD43052.1| Recq helicase 5 [Drosophila melanogaster]    49   9e-04
gi|6567200|dbj|BAA88312.1| DNA helicase RECQE [Drosophila melano...    49   9e-04
gi|24664230|ref|NP_524070.2| CG4879-PA [Drosophila melanogaster]...    49   9e-04
gi|17934407|ref|NP_531197.1| large atp-dependant helicase-relate...    49   9e-04
gi|5410429|gb|AAD43053.1| Recq helicase 5 [Drosophila melanogaster]    49   9e-04
gi|24664226|ref|NP_729983.1| CG4879-PB [Drosophila melanogaster]...    49   9e-04
gi|15887841|ref|NP_353522.1| AGR_C_874p [Agrobacterium tumefacie...    49   9e-04
gi|5410427|gb|AAD43051.1| Recq helicase 5 [Drosophila melanogaster]    49   9e-04
gi|39644917|gb|AAH13277.2| RECQL4 protein [Homo sapiens]               49   9e-04
gi|48108700|ref|XP_396209.1| similar to Blooms syndrome protein ...    48   0.001
gi|29349252|ref|NP_812755.1| ATP-dependent DNA helicase recQ [Ba...    48   0.001
gi|28871283|ref|NP_793902.1| helicase domain protein [Pseudomona...    48   0.001
gi|41723144|ref|ZP_00150087.1| COG1200: RecG-like helicase [Dech...    48   0.001
gi|11500031|ref|NP_071281.1| large helicase-related protein (lhr...    48   0.001
gi|48851841|ref|ZP_00306036.1| COG1201: Lhr-like helicases [Ferr...    48   0.001
gi|46204731|ref|ZP_00049570.2| COG1201: Lhr-like helicases [Magn...    47   0.002
gi|34913868|ref|NP_918281.1| putative DEAD BOX RNA helicase [Ory...    47   0.002
gi|11499982|ref|NP_071228.1| ATP-dependent RNA helicase, putativ...    47   0.002
gi|11360512|pir||T31323 ATP-dependent RNA helicase, eIF-4A famil...    47   0.002
gi|23099269|ref|NP_692735.1| ATP-dependent DNA helicase [Oceanob...    47   0.002
gi|3599385|gb|AAC62691.1| ATP-dependent RNA helicase [Cenarchaeu...    47   0.003
gi|23100496|ref|NP_693963.1| ATP-dependent DNA helicase [Oceanob...    47   0.003
gi|49069000|ref|XP_398789.1| hypothetical protein UM01174.1 [Ust...    47   0.003
gi|33411810|emb|CAD58810.1| RecQ protein-like 4 [Bos taurus]           47   0.003
gi|46118001|ref|ZP_00174511.2| COG0514: Superfamily II DNA helic...    47   0.003
gi|46255199|ref|YP_006111.1| hypothetical protein TTP0128 [Therm...    47   0.003
gi|18310317|ref|NP_562251.1| ATP-dependent DNA helicase [Clostri...    46   0.004
gi|45915043|ref|ZP_00193558.2| COG1201: Lhr-like helicases [Meso...    46   0.004
gi|48836408|ref|ZP_00293404.1| COG1200: RecG-like helicase [Ther...    46   0.004
gi|33146670|dbj|BAC80016.1| putative ATP-dependent DNA helicase ...    46   0.004
gi|46201335|ref|ZP_00055249.2| COG0514: Superfamily II DNA helic...    46   0.006
gi|18977876|ref|NP_579233.1| large helicase-related protein [Pyr...    45   0.007
gi|14590941|ref|NP_143015.1| ATP-dependent helicase LHR [Pyrococ...    45   0.007
gi|50553154|ref|XP_503987.1| hypothetical protein [Yarrowia lipo...    45   0.007
gi|48477952|ref|YP_023658.1| ATP-dependent helicase [Picrophilus...    45   0.007
gi|23485279|gb|EAA20330.1| DEAD/DEAH box helicase, putative [Pla...    45   0.007
gi|24646066|ref|NP_524319.2| CG6920-PA [Drosophila melanogaster]...    45   0.007
gi|5281068|gb|AAD41441.1| RECQ helicase homolog [Drosophila mela...    45   0.007
gi|45184744|ref|NP_982462.1| AAL080Wp [Eremothecium gossypii] >g...    45   0.012
gi|48839078|ref|ZP_00296013.1| COG1061: DNA or RNA helicases of ...    45   0.012
gi|31322740|gb|AAP22927.1| RhrA [Rhodospirillum centenum]              44   0.016


>gi|17556224|ref|NP_497213.1| DEAD/DEAH box helicase and helicase,
            C-terminal (102.9 kD) (3B196) [Caenorhabditis elegans]
 gi|14530907|gb|AAF59587.2| Hypothetical protein Y55B1AL.3
            [Caenorhabditis elegans]
          Length = 923

 Score = 1718 bits (4449), Expect = 0.0
 Identities = 878/923 (95%), Positives = 878/923 (95%)
 Frame = -1

Query: 2772 MNRTPIRRCKSAEIEEDPFSPIPKFSRLRTPRTSREYVCPLKXXXXXXXXXXXXXXXXXX 2593
            MNRTPIRRCKSAEIEEDPFSPIPKFSRLRTPRTSREYVCPLK
Sbjct: 1    MNRTPIRRCKSAEIEEDPFSPIPKFSRLRTPRTSREYVCPLKSTSPQSPSSSTENEPPPV 60

Query: 2592 XVTSPPARKRALEESTVTPIQQKIGPPVLKRSSLSKLADGFRTAAYLNNESENDDDPFGL 2413
             VTSPPARKRALEESTVTPIQQKIGPPVLKRSSLSKLADGFRTAAYLNNESENDDDPFGL
Sbjct: 61   SVTSPPARKRALEESTVTPIQQKIGPPVLKRSSLSKLADGFRTAAYLNNESENDDDPFGL 120

Query: 2412 SFRNEQVLMSKCAPAPEKRPETLTLDPSKCLPERDMEMYRKIKKLDKFYDWQQECLSDKR 2233
            SFRNEQVLMSKCAPAPEKRPETLTLDPSKCLPERDMEMYRKIKKLDKFYDWQQECLSDKR
Sbjct: 121  SFRNEQVLMSKCAPAPEKRPETLTLDPSKCLPERDMEMYRKIKKLDKFYDWQQECLSDKR 180

Query: 2232 LLDGENCILSLPTGAGKTLIAEVLMLREAIVRKRNAILVLPYVAIVQEKISALAPFEDAF 2053
            LLDGENCILSLPTGAGKTLIAEVLMLREAIVRKRNAILVLPYVAIVQEKISALAPFEDAF
Sbjct: 181  LLDGENCILSLPTGAGKTLIAEVLMLREAIVRKRNAILVLPYVAIVQEKISALAPFEDAF 240

Query: 2052 GINIEEYASNKGRFPPIKRRKRVSVYVATIEKANMLINSLITQGQLDRVGMVVVDELHMI 1873
            GINIEEYASNKGRFPPIKRRKRVSVYVATIEKANMLINSLITQGQLDRVGMVVVDELHMI
Sbjct: 241  GINIEEYASNKGRFPPIKRRKRVSVYVATIEKANMLINSLITQGQLDRVGMVVVDELHMI 300

Query: 1872 GDGGRGAILEQLLAKFLYKGTGQIVGMSATLPNIDDLKFALRAFVYSTNFRPVELTEFVK 1693
            GDGGRGAILEQLLAKFLYKGTGQIVGMSATLPNIDDLKFALRAFVYSTNFRPVELTEFVK
Sbjct: 301  GDGGRGAILEQLLAKFLYKGTGQIVGMSATLPNIDDLKFALRAFVYSTNFRPVELTEFVK 360

Query: 1692 IGQTMHQVSENGDLNPAGDLPTNNLKSTDPDGICQLLAKLIPKNSAVIFCPNKKNCENVA 1513
            IGQTMHQVSENGDLNPAGDLPTNNLKSTDPDGICQLLAKLIPKNSAVIFCPNKKNCENVA
Sbjct: 361  IGQTMHQVSENGDLNPAGDLPTNNLKSTDPDGICQLLAKLIPKNSAVIFCPNKKNCENVA 420

Query: 1512 VLIAKTLPAHIRQAKRAESDAFLQSYLSDNDDERMDAVLKQCILSGVAYHHSGLTQDERK 1333
            VLIAKTLPAHIRQAKRAESDAFLQSYLSDNDDERMDAVLKQCILSGVAYHHSGLTQDERK
Sbjct: 421  VLIAKTLPAHIRQAKRAESDAFLQSYLSDNDDERMDAVLKQCILSGVAYHHSGLTQDERK 480

Query: 1332 CVEAAFMEGLIYVVCATSTLAAGVNLPVRRVIIKAPMVGRERLGKAQYLQMAGRAGRAGF 1153
            CVEAAFMEGLIYVVCATSTLAAGVNLPVRRVIIKAPMVGRERLGKAQYLQMAGRAGRAGF
Sbjct: 481  CVEAAFMEGLIYVVCATSTLAAGVNLPVRRVIIKAPMVGRERLGKAQYLQMAGRAGRAGF 540

Query: 1152 DTKGDCITIIKAGEEERWFREMLKSDIPRCXXXXXXXXXXXSFILDCVVLKLAENIEEIM 973
            DTKGDCITIIKAGEEERWFREMLKSDIPRC           SFILDCVVLKLAENIEEIM
Sbjct: 541  DTKGDCITIIKAGEEERWFREMLKSDIPRCMSSLSSEESMGSFILDCVVLKLAENIEEIM 600

Query: 972  TAVRYSLFYAQESPENIRKLVESSVKRLEEHYFITIEPLEQDVASEPSAQASSIPRVPGK 793
            TAVRYSLFYAQESPENIRKLVESSVKRLEEHYFITIEPLEQDVASEPSAQASSIPRVPGK
Sbjct: 601  TAVRYSLFYAQESPENIRKLVESSVKRLEEHYFITIEPLEQDVASEPSAQASSIPRVPGK 660

Query: 792  ISPSDLGNAVFNAGFDPDEATRLHADLVSSLNQGVIFASHFHLLFIITPYEQVCNINWDL 613
            ISPSDLGNAVFNAGFDPDEATRLHADLVSSLNQGVIFASHFHLLFIITPYEQVCNINWDL
Sbjct: 661  ISPSDLGNAVFNAGFDPDEATRLHADLVSSLNQGVIFASHFHLLFIITPYEQVCNINWDL 720

Query: 612  FLLMYNALPSSERKLLAECGLEEKFILEAIITRVDLTAGTPRMRLYIALMLQKIWNHEPM 433
            FLLMYNALPSSERKLLAECGLEEKFILEAIITRVDLTAGTPRMRLYIALMLQKIWNHEPM
Sbjct: 721  FLLMYNALPSSERKLLAECGLEEKFILEAIITRVDLTAGTPRMRLYIALMLQKIWNHEPM 780

Query: 432  YTVAERFGVEKGWXXXXXXXXXXXXXXXAKFSEKITTMWPLRKLLPELVQRLSEAAQPEL 253
            YTVAERFGVEKGW               AKFSEKITTMWPLRKLLPELVQRLSEAAQPEL
Sbjct: 781  YTVAERFGVEKGWLQATLQSSISQAASIAKFSEKITTMWPLRKLLPELVQRLSEAAQPEL 840

Query: 252  LPLMTVDGIKKARAAILFKAGYKTVGMIARANPLKLVQELGTIRMAQANSIIASARMVLR 73
            LPLMTVDGIKKARAAILFKAGYKTVGMIARANPLKLVQELGTIRMAQANSIIASARMVLR
Sbjct: 841  LPLMTVDGIKKARAAILFKAGYKTVGMIARANPLKLVQELGTIRMAQANSIIASARMVLR 900

Query: 72   DQVDEKMEELDVWGVATDSFNYF 4
            DQVDEKMEELDVWGVATDSFNYF
Sbjct: 901  DQVDEKMEELDVWGVATDSFNYF 923


>gi|39586142|emb|CAE69218.1| Hypothetical protein CBG15258
            [Caenorhabditis briggsae]
          Length = 898

 Score = 1451 bits (3756), Expect = 0.0
 Identities = 739/925 (79%), Positives = 801/925 (85%), Gaps = 2/925 (0%)
 Frame = -1

Query: 2772 MNRTPIRRCKSAEIEEDPFSPIPKFSRLRTPRTSREYVCPLKXXXXXXXXXXXXXXXXXX 2593
            M +TP+RR KS +++ DPF+PIPK S LR+PRTSRE++CPL+
Sbjct: 1    MEKTPVRRSKSVDLD-DPFTPIPKLSNLRSPRTSREFICPLRTTPPPEGSENSTTI---- 55

Query: 2592 XVTSPPARKRALEESTVTPIQQKIGPPVLKRSSLSKLADGFRTAAYLNNESENDDDPFGL 2413
                 P RKR +EES+VTP+ +K GPP+LK+SS+SKLADGFR+AA L NE ENDDDPFGL
Sbjct: 56   --PPSPVRKRGIEESSVTPLHRKNGPPLLKKSSMSKLADGFRSAANLINEGENDDDPFGL 113

Query: 2412 SFRNEQVLMSKCAPAPEKR--PETLTLDPSKCLPERDMEMYRKIKKLDKFYDWQQECLSD 2239
            SFRN Q+L+SK  P   +R   E   +DPSKCLPER ME Y++IKKL+KFYDWQQECLSD
Sbjct: 114  SFRNYQILLSKKVPETSRRIPDEEEVIDPSKCLPERAMEKYKRIKKLEKFYDWQQECLSD 173

Query: 2238 KRLLDGENCILSLPTGAGKTLIAEVLMLREAIVRKRNAILVLPYVAIVQEKISALAPFED 2059
            KRLL+GENCILSLPTGAGKTLIAE+LMLREAIV KRNAILVLPYVAIVQEKIS+LAPFED
Sbjct: 174  KRLLNGENCILSLPTGAGKTLIAEILMLREAIVHKRNAILVLPYVAIVQEKISSLAPFED 233

Query: 2058 AFGINIEEYASNKGRFPPIKRRKRVSVYVATIEKANMLINSLITQGQLDRVGMVVVDELH 1879
            AFGINIEEYASNKGRFPPIKRRKRVSVYVATIEKANMLINSLITQ QLD++GMVVVDELH
Sbjct: 234  AFGINIEEYASNKGRFPPIKRRKRVSVYVATIEKANMLINSLITQNQLDQIGMVVVDELH 293

Query: 1878 MIGDGGRGAILEQLLAKFLYKGTGQIVGMSATLPNIDDLKFALRAFVYSTNFRPVELTEF 1699
            MIGDGGRGAILEQLLAKFLYKG+GQIVGMSATLPNIDDL+FALR+FVYSTNFRPVEL EF
Sbjct: 294  MIGDGGRGAILEQLLAKFLYKGSGQIVGMSATLPNIDDLQFALRSFVYSTNFRPVELAEF 353

Query: 1698 VKIGQTMHQVSENGDLNPAGDLPTNNLKSTDPDGICQLLAKLIPKNSAVIFCPNKKNCEN 1519
            VKIGQTMHQV   GDL PAGDLPTNNLKSTDPDGICQLLAKLIPK+SAVIFCPNKKNCEN
Sbjct: 354  VKIGQTMHQVENGGDLKPAGDLPTNNLKSTDPDGICQLLAKLIPKSSAVIFCPNKKNCEN 413

Query: 1518 VAVLIAKTLPAHIRQAKRAESDAFLQSYLSDNDDERMDAVLKQCILSGVAYHHSGLTQDE 1339
            VAVLIAKTLPAHIRQAKRAES+AFLQSYL+DNDDERMDA LKQCILSGVAYHHSGLTQDE
Sbjct: 414  VAVLIAKTLPAHIRQAKRAESEAFLQSYLTDNDDERMDADLKQCILSGVAYHHSGLTQDE 473

Query: 1338 RKCVEAAFMEGLIYVVCATSTLAAGVNLPVRRVIIKAPMVGRERLGKAQYLQMAGRAGRA 1159
            RKCVEAAFMEGLIYVVCATSTLAAGVNLPVRRVIIK PMVGRERLGKAQYLQMAGRAGRA
Sbjct: 474  RKCVEAAFMEGLIYVVCATSTLAAGVNLPVRRVIIKCPMVGRERLGKAQYLQMAGRAGRA 533

Query: 1158 GFDTKGDCITIIKAGEEERWFREMLKSDIPRCXXXXXXXXXXXSFILDCVVLKLAENIEE 979
            GFDTKGDCITI+K GEEERWFREMLKSDIPRC           SFILD +VLK+A+N+EE
Sbjct: 534  GFDTKGDCITIVKQGEEERWFREMLKSDIPRCMSSLSSVEAMGSFILDMIVLKIAKNLEE 593

Query: 978  IMTAVRYSLFYAQESPENIRKLVESSVKRLEEHYFITIEPLEQDVASEPSAQASSIPRVP 799
            ++  V+YSL+ AQESP+ IR+LVE S++RLEEH F+TIE  E
Sbjct: 594  VLLGVQYSLYAAQESPDKIRELVEKSLQRLEEHRFLTIEDRE------------------ 635

Query: 798  GKISPSDLGNAVFNAGFDPDEATRLHADLVSSLNQGVIFASHFHLLFIITPYEQVCNINW 619
              I+PSDLG+AVFNAGF P+EATRLH DL+SSLNQGVIF+SHFHLLFIITPYEQVCNINW
Sbjct: 636  --ITPSDLGSAVFNAGFAPEEATRLHTDLISSLNQGVIFSSHFHLLFIITPYEQVCNINW 693

Query: 618  DLFLLMYNALPSSERKLLAECGLEEKFILEAIITRVDLTAGTPRMRLYIALMLQKIWNHE 439
            DLFLL+YNALP SERKLL ECGLEEKFILEAIITRVDL AGT RMRLYIALMLQKIWNHE
Sbjct: 694  DLFLLLYNALPQSERKLLGECGLEEKFILEAIITRVDLIAGTTRMRLYIALMLQKIWNHE 753

Query: 438  PMYTVAERFGVEKGWXXXXXXXXXXXXXXXAKFSEKITTMWPLRKLLPELVQRLSEAAQP 259
            PM+ VAERFGVEKGW               AKFSEKITTMWPLRKLLPELVQRLSEAAQP
Sbjct: 754  PMFQVAERFGVEKGWLQATLQSSISQAASIAKFSEKITTMWPLRKLLPELVQRLSEAAQP 813

Query: 258  ELLPLMTVDGIKKARAAILFKAGYKTVGMIARANPLKLVQELGTIRMAQANSIIASARMV 79
            ELLPLMTVDG+KKARAAILFKAGYKTVGMIARANPLKLVQELGTIR+AQA SII SA+MV
Sbjct: 814  ELLPLMTVDGVKKARAAILFKAGYKTVGMIARANPLKLVQELGTIRLAQAKSIINSAKMV 873

Query: 78   LRDQVDEKMEELDVWGVATDSFNYF 4
            LRDQVDEKMEELDVWGVATD+F+YF
Sbjct: 874  LRDQVDEKMEELDVWGVATDNFDYF 898




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