Homology by BLASTX


BLASTX 2.2.4 [Aug-26-2002]
Query= Y54E2A_5
         (714 letters)

Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
           1,967,186 sequences; 661,712,633 total letters


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|17537517|ref|NP_497061.1| putative membrane protein (2P42) [C...   477   e-133
gi|39583075|emb|CAE60615.1| Hypothetical protein CBG04256 [Caeno...   205   7e-52
gi|48863002|ref|ZP_00316896.1| COG4764: Uncharacterized protein ...    39   0.081
gi|18420830|ref|NP_568451.1| expressed protein [Arabidopsis thal...    35   1.5
gi|42657173|ref|XP_376370.1| hypothetical protein XP_376370 [Hom...    33   4.4
gi|34932383|ref|XP_214530.2| similar to methyl-CpG binding prote...    33   7.6
gi|48847891|ref|ZP_00302139.1| hypothetical protein Saro02003507...    32   9.9
gi|7248705|gb|AAF43629.1| chitinase C precursor [Streptomyces pe...    32   9.9


>gi|17537517|ref|NP_497061.1| putative membrane protein (2P42)
           [Caenorhabditis elegans]
 gi|7510179|pir||T27145 hypothetical protein Y54E2A.5 -
           Caenorhabditis elegans
 gi|3881100|emb|CAA21678.1| Hypothetical protein Y54E2A.5
           [Caenorhabditis elegans]
          Length = 237

 Score =  477 bits (1227), Expect = e-133
 Identities = 237/237 (100%), Positives = 237/237 (100%)
 Frame = -1

Query: 714 MKLVLAVIFVFLTFSAADVDGDVQCGNNKFCRVGFRPFKYSQKVRNDFQLLRVKAQELEI 535
           MKLVLAVIFVFLTFSAADVDGDVQCGNNKFCRVGFRPFKYSQKVRNDFQLLRVKAQELEI
Sbjct: 1   MKLVLAVIFVFLTFSAADVDGDVQCGNNKFCRVGFRPFKYSQKVRNDFQLLRVKAQELEI 60

Query: 534 LSTNRILGIRSDADLSTLISWQSELCRDDTVGFVLDKNVSEYRVSCVWTGSSQLGQCRAV 355
           LSTNRILGIRSDADLSTLISWQSELCRDDTVGFVLDKNVSEYRVSCVWTGSSQLGQCRAV
Sbjct: 61  LSTNRILGIRSDADLSTLISWQSELCRDDTVGFVLDKNVSEYRVSCVWTGSSQLGQCRAV 120

Query: 354 PPKYMAEVYSFIEEDEWEEKLQKVRNAIGCDTSAAVNFQEFVEIKPPKTNGAHGASIRKS 175
           PPKYMAEVYSFIEEDEWEEKLQKVRNAIGCDTSAAVNFQEFVEIKPPKTNGAHGASIRKS
Sbjct: 121 PPKYMAEVYSFIEEDEWEEKLQKVRNAIGCDTSAAVNFQEFVEIKPPKTNGAHGASIRKS 180

Query: 174 GGKTNTTAIRYVKRHRTLSEFVICNDRCVQGGIGYSASLVIILALAISFFKNCIQVE 4
           GGKTNTTAIRYVKRHRTLSEFVICNDRCVQGGIGYSASLVIILALAISFFKNCIQVE
Sbjct: 181 GGKTNTTAIRYVKRHRTLSEFVICNDRCVQGGIGYSASLVIILALAISFFKNCIQVE 237




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