Homology by BLASTX
BLASTX 2.2.4 [Aug-26-2002]
Query= Y48G10A_2
(2337 letters)
Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
1,967,186 sequences; 661,712,633 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|17510191|ref|NP_493368.1| putative cytoplasmic protein (1O54)... 1498 0.0
gi|39592460|emb|CAE63537.1| Hypothetical protein CBG08018 [Caeno... 838 0.0
gi|17865719|sp|P14733|LAM1_MOUSE Lamin B1 >gnl|BL_ORD_ID|1175058... 40 0.19
gi|6754556|ref|NP_034851.1| lamin B1 [Mus musculus] >gnl|BL_ORD_... 40 0.19
gi|5031877|ref|NP_005564.1| lamin B1 [Homo sapiens] >gnl|BL_ORD_... 40 0.19
gi|15126742|gb|AAH12295.1| Lamin B1 [Homo sapiens] 40 0.19
gi|110630|pir||S07720 lamin B - mouse >gnl|BL_ORD_ID|1907340 gi|... 40 0.19
gi|34879507|ref|XP_346513.1| hypothetical protein XP_346512 [Rat... 39 0.43
gi|26348034|dbj|BAC37665.1| unnamed protein product [Mus musculus] 39 0.73
gi|6323745|ref|NP_013816.1| Hypothetical ORF; Ymr098cp [Saccharo... 38 1.2
gi|16124455|ref|NP_419019.1| oxidoreductase iron/ascorbate famil... 38 1.2
gi|16758782|ref|NP_446357.1| lamin B1 [Rattus norvegicus] >gnl|B... 38 1.2
gi|38111797|gb|EAA57313.1| hypothetical protein MG08282.4 [Magna... 36 4.7
gi|13161386|dbj|BAB32979.1| lamin B1 [Carassius auratus] 36 4.7
gi|23120810|ref|ZP_00103332.1| COG0523: Putative GTPases (G3E fa... 35 6.2
gi|6065833|emb|CAB58234.1| lamin B1 protein [Danio rerio] 35 8.1
>gi|17510191|ref|NP_493368.1| putative cytoplasmic protein (1O54)
[Caenorhabditis elegans]
gi|6580308|emb|CAB63373.1| Hypothetical protein Y48G10A.4
[Caenorhabditis elegans]
Length = 778
Score = 1498 bits (3878), Expect = 0.0
Identities = 755/778 (97%), Positives = 755/778 (97%)
Frame = -1
Query: 2337 MDNPESTGDVSWFELFVDPTCISKSLLDPEKRKQLPRLCMQFTDKGFLAEREKDKGKLAV 2158
MDNPESTGDVSWFELFVDPTCISKSLLDPEKRKQLPRLCMQFTDKGFLAEREKDKGKLAV
Sbjct: 1 MDNPESTGDVSWFELFVDPTCISKSLLDPEKRKQLPRLCMQFTDKGFLAEREKDKGKLAV 60
Query: 2157 EELMLFERKAASMRLCAMATFAALDYDIEFIIDNIPRNEIQTLRVLADNFYRIYNEKNLD 1978
EELMLFERKAASMRLCAMATFAALDYDIEFIIDNIPRNEIQTLRVLADNFYRIYNEKNLD
Sbjct: 61 EELMLFERKAASMRLCAMATFAALDYDIEFIIDNIPRNEIQTLRVLADNFYRIYNEKNLD 120
Query: 1977 ATFGNWLFYRFVLSIDXXXXXXXXXXXXXXXXTLSNGQLMPTDPALLKHEKTQRTIMELK 1798
ATFGNWLFYRFVLSID TLSNGQLMPTDPALLKHEKTQRTIMELK
Sbjct: 121 ATFGNWLFYRFVLSIDRRNRLAPPAPRATIPTTLSNGQLMPTDPALLKHEKTQRTIMELK 180
Query: 1797 EHVLKARAFITELAEVPRDVVAPGIQCFLKPFVELAPKAMTAAFLGDRNVLIENPSADFE 1618
EHVLKARAFITELAEVPRDVVAPGIQCFLKPFVELAPKAMTAAFLGDRNVLIENPSADFE
Sbjct: 181 EHVLKARAFITELAEVPRDVVAPGIQCFLKPFVELAPKAMTAAFLGDRNVLIENPSADFE 240
Query: 1617 VDKVLLSAGDVSNKCLSELVTFLFTSGELQEAKKILTRVVKPTVTHPLVAIDETIFKSYC 1438
VDKVLLSAGDVSNKCLSELVTFLFTSGELQEAKKILTRVVKPTVTHPLVAIDETIFKSYC
Sbjct: 241 VDKVLLSAGDVSNKCLSELVTFLFTSGELQEAKKILTRVVKPTVTHPLVAIDETIFKSYC 300
Query: 1437 QILNAQGTPYXXXXXXXSLLKPYVFDLNSLNDEKMRRSEVLRHRGVQETTGQLQNVYLAE 1258
QILNAQGTPY SLLKPYVFDLNSLNDEKMRRSEVLRHRGVQETTGQLQNVYLAE
Sbjct: 301 QILNAQGTPYSSSTASSSLLKPYVFDLNSLNDEKMRRSEVLRHRGVQETTGQLQNVYLAE 360
Query: 1257 NAALSVIDEHPDRFSKFFLRKAFFGTKNKRKLAAIRAHLQYLCASISDLRDILETNGMDV 1078
NAALSVIDEHPDRFSKFFLRKAFFGTKNKRKLAAIRAHLQYLCASISDLRDILETNGMDV
Sbjct: 361 NAALSVIDEHPDRFSKFFLRKAFFGTKNKRKLAAIRAHLQYLCASISDLRDILETNGMDV 420
Query: 1077 SQLRTFAVPSEHLKLEPPPAFHVLEELVSGERKIDAAQGPSTHEISRIFPLPRAADPYWI 898
SQLRTFAVPSEHLKLEPPPAFHVLEELVSGERKIDAAQGPSTHEISRIFPLPRAADPYWI
Sbjct: 421 SQLRTFAVPSEHLKLEPPPAFHVLEELVSGERKIDAAQGPSTHEISRIFPLPRAADPYWI 480
Query: 897 IMTEYDIPTLQNALTKLGPFWFPTKMQVPEHLMEKLEKHSNLPTYNLHRLLLCKIDQLSK 718
IMTEYDIPTLQNALTKLGPFWFPTKMQVPEHLMEKLEKHSNLPTYNLHRLLLCKIDQLSK
Sbjct: 481 IMTEYDIPTLQNALTKLGPFWFPTKMQVPEHLMEKLEKHSNLPTYNLHRLLLCKIDQLSK 540
Query: 717 MHHFEKFKDVLSLALHSLKLVHESWVMTAAFEMIQVPAIIVNQQFAWERHSLERDFAQTQ 538
MHHFEKFKDVLSLALHSLKLVHESWVMTAAFEMIQVPAIIVNQQFAWERHSLERDFAQTQ
Sbjct: 541 MHHFEKFKDVLSLALHSLKLVHESWVMTAAFEMIQVPAIIVNQQFAWERHSLERDFAQTQ 600
Query: 537 LIFNSDHFVPNDYSAGMINEVMDLGSVCLGLMINIGDAQSVLEKGGQLSMERFKSVPIAR 358
LIFNSDHFVPNDYSAGMINEVMDLGSVCLGLMINIGDAQSVLEKGGQLSMERFKSVPIAR
Sbjct: 601 LIFNSDHFVPNDYSAGMINEVMDLGSVCLGLMINIGDAQSVLEKGGQLSMERFKSVPIAR 660
Query: 357 MFGAYLVNYSDPATRKKCADGFWRTVTQRLLEAQPPRGFRRGNEVEQALLVTRKELADLF 178
MFGAYLVNYSDPATRKKCADGFWRTVTQRLLEAQPPRGFRRGNEVEQALLVTRKELADLF
Sbjct: 661 MFGAYLVNYSDPATRKKCADGFWRTVTQRLLEAQPPRGFRRGNEVEQALLVTRKELADLF 720
Query: 177 HLFSLIRDQRVVDFLLAYAVCLHNKVVIGQRKSNLKIHAKLLDLYTPDPNAYVIFSTF 4
HLFSLIRDQRVVDFLLAYAVCLHNKVVIGQRKSNLKIHAKLLDLYTPDPNAYVIFSTF
Sbjct: 721 HLFSLIRDQRVVDFLLAYAVCLHNKVVIGQRKSNLKIHAKLLDLYTPDPNAYVIFSTF 778
>gi|39592460|emb|CAE63537.1| Hypothetical protein CBG08018
[Caenorhabditis briggsae]
Length = 958
Score = 838 bits (2164), Expect = 0.0
Identities = 439/780 (56%), Positives = 557/780 (71%), Gaps = 14/780 (1%)
Frame = -1
Query: 2337 MDNPESTGDVSWFELFVDPTCISKSLLDPEKRKQLPRLCMQFTDKGFLAEREKDKGKLAV 2158
MDNP++ G++SWFELFVDPT +SK++LDPEK+KQLP+LCMQFTDKG LAEREK++GKLAV
Sbjct: 1 MDNPDTNGELSWFELFVDPTVVSKAILDPEKKKQLPKLCMQFTDKGLLAEREKERGKLAV 60
Query: 2157 EELMLFERKAASMRLCAMATFAALDYDIEFIIDNIPRNEIQTLRVLADNFYRIYNEKNLD 1978
EELMLFERK+ASM+LCAMATFAALD+DIEF+IDNI RNE+ TLRVLADNFYRIYNEKNLD
Sbjct: 61 EELMLFERKSASMKLCAMATFAALDFDIEFVIDNIHRNELLTLRVLADNFYRIYNEKNLD 120
Query: 1977 ATFGNWLFYRFVLSIDXXXXXXXXXXXXXXXXTLSNGQLMPTDPALLKHEKTQRTIMELK 1798
ATFGNWLFYRFVLSID TLSNGQ+MP DPA +KHEKTQRTI+ELK
Sbjct: 121 ATFGNWLFYRFVLSIDRRNRLDPPAPRATIATTLSNGQIMPLDPASVKHEKTQRTILELK 180
Query: 1797 EHVLKARAFITELAEVPRDVVAPGIQCFLKPFVELAPKAMTAAFLGDRNVLIENPSADFE 1618
+H++KA+AFITEL+EVPRD+VAPGIQCFLKPFVELAPKAMTAAFLGDRNVLIENPSADFE
Sbjct: 181 DHIMKAKAFITELSEVPRDIVAPGIQCFLKPFVELAPKAMTAAFLGDRNVLIENPSADFE 240
Query: 1617 VDKVLLSAGDVSNKCLSELVTFLFTSGELQEAKKILTRVVKPTVTHPLVAIDETIFKSYC 1438
+KV+L A DV+NKCLSELV +T+GEL EAKKIL+RV KP HP+VAIDE +F++YC
Sbjct: 241 AEKVILPAADVANKCLSELVVVHYTNGELLEAKKILSRVTKPKTAHPMVAIDEDVFRAYC 300
Query: 1437 QILNAQGTPYXXXXXXXSLLKPYVFDLNSLNDEKMRRSEVLRHRGVQETTGQLQNVYLAE 1258
ILN +GT Y +KPY+FDLN+LNDE+ R+SEV R RGVQET+GQLQ+VY AE
Sbjct: 301 AILNVKGTDYSTSGA----IKPYIFDLNALNDEENRKSEVWRQRGVQETSGQLQSVYKAE 356
Query: 1257 NAALSVIDEHP-------------DRFSKFFLRKAFFGTKNKRKLAAIRAHLQYLCASIS 1117
NAA SV + HP +RFSK L+K G ++KR+L IRA LQ+LCA+I
Sbjct: 357 NAACSVAENHPECIRDAIKTTAEVERFSK-VLKKKLEGIRDKRRLQRIRAQLQFLCATIP 415
Query: 1116 DLRDILETNGMDVSQLRTFAVPSEHLKLEPPPAFHVLEELVSGERKIDAAQGPSTHEISR 937
DLRDIL N +DV LR F PS+H LE P PST +IS
Sbjct: 416 DLRDILAANEVDVKGLRQFVTPSQHQNLERP---------------------PSTEQISN 454
Query: 936 IFPLPRAADPYWIIMTEYDIPTLQNALTKLGPFWFPTKMQVPEHLMEKLEKHSNLPTYNL 757
R DP+W +MTE+D+ L+ AL +LGPFWFP KM V E L++ LEK +N P Y +
Sbjct: 455 SL---RGNDPFWALMTEFDVHILKMALVELGPFWFPLKMPVSEFLLDTLEKRANTPIYTI 511
Query: 756 HRLLLCKIDQLSKMHHFEKFKDVLSLALHSLKLVHESWVMTAAFEMIQVPAIIVNQQFAW 577
RL L K+ QLS+MH+F + + LS L + + AFE + V ++I N W
Sbjct: 512 TRLFLSKLYQLSRMHNFRGYLETLSSYNPDL---GQDMGVDLAFESVYVKSLISNAHMPW 568
Query: 576 ERHSLERDFAQTQLIFNSDHFVPNDYSAGMINEVMDLGSVCLGLMINIGDAQSVLEKGGQ 397
+ + A + LIF+ N+ SA M N+ C+ LM+N+GD Q V +KGGQ
Sbjct: 569 KIAHWDVTNADSALIFDQKLIRVNENSAKMYNQ-------CISLMLNLGDHQIVFDKGGQ 621
Query: 396 LSMERFKSVPIARMFGAYLVNYSDPATRKKCADGFWRTVTQRLLEAQPPR-GFRRGNEVE 220
+ ++ FK +PIARMFGA+ + +D + KKCADGF R++T ++ AQPPR G RR ++ E
Sbjct: 622 IPIDIFKCIPIARMFGAF-IPATDESVAKKCADGFLRSLTPVIVGAQPPRGGMRREHDAE 680
Query: 219 QALLVTRKELADLFHLFSLIRDQRVVDFLLAYAVCLHNKVVIGQRKSNLKIHAKLLDLYT 40
+ +L R +L +H+ SL++ + ++DF+LAY V LHN+ ++ +++S+LKIHAKL+ LY+
Sbjct: 681 KKMLAFRSQLVLQYHMMSLVKQKNLLDFILAYFVFLHNRNMLAKKQSHLKIHAKLVHLYS 740