Homology by BLASTX
BLASTX 2.2.4 [Aug-26-2002]
Query= Y47D3B_11
(2286 letters)
Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
1,967,186 sequences; 661,712,633 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|17555980|ref|NP_499474.1| BED finger containing protein (3M55... 1188 0.0
gi|39584813|emb|CAE67708.1| Hypothetical protein CBG13281 [Caeno... 637 0.0
gi|39581768|emb|CAE74141.1| Hypothetical protein CBG21812 [Caeno... 72 4e-11
gi|32567110|ref|NP_503518.2| putative protein (5C328) [Caenorhab... 72 6e-11
gi|7507581|pir||T33231 hypothetical protein T10B5.2 - Caenorhabd... 72 6e-11
gi|482190|pir||S40983 hypothetical protein F58A4.11 - Caenorhabd... 43 0.029
gi|17553808|ref|NP_499134.1| GEX (Gut on EXterior) Interacting p... 43 0.029
gi|39590795|emb|CAE65168.1| Hypothetical protein CBG10038 [Caeno... 42 0.084
gi|40788311|dbj|BAA31612.2| KIAA0637 protein [Homo sapiens] 40 0.24
gi|100210|pir||S25299 extensin precursor - tomato >gnl|BL_ORD_ID... 40 0.24
gi|20532299|sp|O75132|ZBE4_HUMAN Zinc finger BED domain containi... 40 0.24
gi|42662523|ref|XP_376023.1| zinc finger, BED domain containing ... 40 0.24
gi|39546238|emb|CAE04247.3| OSJNBa0089N06.8 [Oryza sativa (japon... 40 0.32
gi|29826652|ref|NP_821286.1| hypothetical protein SAV112 [Strept... 39 0.42
gi|31088890|ref|NP_852077.1| hypothetical protein LOC223773 [Mus... 39 0.42
gi|28972327|dbj|BAC65617.1| mKIAA0637 protein [Mus musculus] 39 0.42
gi|50286629|ref|XP_445743.1| unnamed protein product [Candida gl... 39 0.54
gi|42565109|ref|NP_188851.2| protease inhibitor/seed storage/lip... 39 0.71
gi|34867861|ref|XP_235553.2| hypothetical protein XP_235553 [Rat... 39 0.71
gi|34872074|ref|XP_233556.2| similar to Ser/Arg-related nuclear ... 38 1.2
gi|31206253|ref|XP_312078.1| ENSANGP00000023922 [Anopheles gambi... 38 1.2
gi|28574875|ref|NP_730262.2| CG13731-PA [Drosophila melanogaster... 38 1.2
gi|17978964|gb|AAL47486.1| AT3g04930/T9J14_12 [Arabidopsis thali... 28 1.5
gi|38076654|ref|XP_130996.2| hypothetical protein XP_130996 [Mus... 37 1.6
gi|39593774|emb|CAE62067.1| Hypothetical protein CBG06089 [Caeno... 37 1.6
gi|119712|sp|P14918|EXTN_MAIZE Extensin precursor (Proline-rich ... 37 2.1
gi|82698|pir||JQ0985 hydroxyproline-rich glycoprotein precursor ... 37 2.1
gi|228937|prf||1814452B Hyp-rich glycoprotein 37 2.1
gi|227614|prf||1707318A Thr rich extensin 37 2.1
gi|50737388|ref|XP_419186.1| PREDICTED: similar to nucleolar pro... 37 2.1
gi|11067738|ref|NP_067736.1| overlapping protein/movement protei... 37 2.7
gi|46252212|gb|AAS85192.1| ActA [Listeria monocytogenes] 37 2.7
gi|6166287|gb|AAF04762.1| actin nucleator protein ActA [Listeria... 37 2.7
gi|46252107|gb|AAS85102.1| ActA [Listeria monocytogenes] 37 2.7
gi|46252009|gb|AAS85018.1| ActA [Listeria monocytogenes] >gnl|BL... 37 2.7
gi|22770498|gb|AAN06624.1| ActA [Listeria monocytogenes] >gnl|BL... 37 2.7
gi|46251780|gb|AAS84822.1| ActA [Listeria monocytogenes] 37 2.7
gi|46251724|gb|AAS84774.1| ActA [Listeria monocytogenes] 37 2.7
gi|22770484|gb|AAN06617.1| ActA [Listeria monocytogenes] 37 2.7
gi|46251869|gb|AAS84898.1| ActA [Listeria monocytogenes] >gnl|BL... 37 2.7
gi|46252037|gb|AAS85042.1| ActA [Listeria monocytogenes] 37 2.7
gi|46251960|gb|AAS84976.1| ActA [Listeria monocytogenes] >gnl|BL... 37 2.7
gi|46906436|ref|YP_012825.1| actin-assembly inducing protein [Li... 37 2.7
gi|47222426|emb|CAG12946.1| unnamed protein product [Tetraodon n... 37 2.7
gi|2979409|dbj|BAA25192.1| ActA [Listeria monocytogenes] 37 2.7
gi|22770476|gb|AAN06613.1| ActA [Listeria monocytogenes] 36 3.5
gi|45190779|ref|NP_985033.1| AER176Wp [Eremothecium gossypii] >g... 36 3.5
gi|33326818|gb|AAQ08827.1| 17kDa proline rich protein [Grapevine... 36 3.5
gi|42519588|ref|NP_965518.1| hypothetical protein LJ1711 [Lactob... 36 3.5
gi|23612127|ref|NP_703707.1| hypothetical protein, expressed [Pl... 36 4.6
gi|46981496|gb|AAT07772.1| membrane glycoprotein C [Human herpes... 36 4.6
gi|46323149|ref|ZP_00223514.1| COG1077: Actin-like ATPase involv... 35 6.0
gi|50309065|ref|XP_454538.1| unnamed protein product [Kluyveromy... 35 6.0
gi|49388528|dbj|BAD25650.1| hypothetical protein [Oryza sativa (... 35 6.0
gi|39586075|emb|CAE69151.1| Hypothetical protein CBG15181 [Caeno... 35 6.0
gi|7949115|ref|NP_058079.1| Ser/Arg-related nuclear matrix prote... 35 7.9
gi|34911602|ref|NP_917148.1| P0004A09.26 [Oryza sativa (japonica... 35 7.9
gi|47227199|emb|CAG00561.1| unnamed protein product [Tetraodon n... 35 7.9
gi|23505399|gb|AAN37688.1| elicitor-like mating protein M81 [Phy... 35 7.9
gi|20521440|dbj|BAB91949.1| B1003B09.3 [Oryza sativa (japonica c... 35 7.9
>gi|17555980|ref|NP_499474.1| BED finger containing protein (3M554)
[Caenorhabditis elegans]
gi|7509934|pir||T26955 hypothetical protein Y47D3B.9 - Caenorhabditis
elegans
gi|3881010|emb|CAA21044.1| Hypothetical protein Y47D3B.9
[Caenorhabditis elegans]
Length = 761
Score = 1188 bits (3073), Expect = 0.0
Identities = 615/761 (80%), Positives = 615/761 (80%)
Frame = -1
Query: 2286 MTSLLGGNFTEALHTVLSNQLNVMSQKTXXXXXXXXXXXXXXXXXXXXXXXSLVSAGISD 2107
MTSLLGGNFTEALHTVLSNQLNVMSQKT SLVSAGISD
Sbjct: 1 MTSLLGGNFTEALHTVLSNQLNVMSQKTSDSEAPTTFSSSSSSDSPPYDPMSLVSAGISD 60
Query: 2106 QNGLMDMFKDGLFATLVPPTDVANSDTXXXXXXXXXXXXXXXXXXXXXXXXXXXXALSLI 1927
QNGLMDMFKDGLFATLVPPTDVANSDT ALSLI
Sbjct: 61 QNGLMDMFKDGLFATLVPPTDVANSDTASSESPEPAAQSHEAAEETGGTEEQQAAALSLI 120
Query: 1926 QSFGTPIPSKFEDIESQFFSEATIRDLMPVLASVQGSPPHNQNQLSFGSTSSPSAWARNA 1747
QSFGTPIPSKFEDIESQFFSEATIRDLMPVLASVQGSPPHNQNQLSFGSTSSPSAWARNA
Sbjct: 121 QSFGTPIPSKFEDIESQFFSEATIRDLMPVLASVQGSPPHNQNQLSFGSTSSPSAWARNA 180
Query: 1746 GRKKSHPVWDFFKDMKDSTGAGGVICLHCSWSGDDRSPNNLRTHLKKFHSDDGIFNRFSE 1567
GRKKSHPVWDFFKDMKDSTGAGGVICLHCSWSGDDRSPNNLRTHLKKFHSDDGIFNRFSE
Sbjct: 181 GRKKSHPVWDFFKDMKDSTGAGGVICLHCSWSGDDRSPNNLRTHLKKFHSDDGIFNRFSE 240
Query: 1566 KLAKMARRKQQESTLVIDPSHSKDDSAFFEGSSGSDAPSTIDTTQLMALLEQXXXXXXXX 1387
KLAKMARRKQQESTLVIDPSHSKDDSAFFEGSSGSDAPSTIDTTQLMALLEQ
Sbjct: 241 KLAKMARRKQQESTLVIDPSHSKDDSAFFEGSSGSDAPSTIDTTQLMALLEQSAAAAAAA 300
Query: 1386 XXXXXSENPIXXXXXXXXXXXXXXXXXXXXXXTAARASEILFAAGMRPHKKTSEIWEHYK 1207
SENPI TAARASEILFAAGMRPHKKTSEIWEHYK
Sbjct: 301 AAASSSENPITSSLLKKDRTTTTTTEKELSPLTAARASEILFAAGMRPHKKTSEIWEHYK 360
Query: 1206 CLNEKQNVECIYCWKVLKRNDSSTKSMWGHMNAYHQDILRDGTTRKKVKRPANGLDFDET 1027
CLNEKQNVECIYCWKVLKRNDSSTKSMWGHMNAYHQDILRDGTTRKKVKRPANGLDFDET
Sbjct: 361 CLNEKQNVECIYCWKVLKRNDSSTKSMWGHMNAYHQDILRDGTTRKKVKRPANGLDFDET 420
Query: 1026 PTQPYVKRVRGGAGSSSSLPSMVKMDQKPMLDSMAFLQQLQQSGSLTEADFSSFANGSSL 847
PTQPYVKRVRGGAGSSSSLPSMVKMDQKPMLDSMAFLQQLQQSGSLTEADFSSFANGSSL
Sbjct: 421 PTQPYVKRVRGGAGSSSSLPSMVKMDQKPMLDSMAFLQQLQQSGSLTEADFSSFANGSSL 480
Query: 846 NFLDSLPKSSEVININSGFVKKEEMEEDTENHVEXXXXXXSDERIKSETPDTYGSPNTST 667
NFLDSLPKSSEVININSGFVKKEEMEEDTENHVE SDERIKSETPDTYGSPNTST
Sbjct: 481 NFLDSLPKSSEVININSGFVKKEEMEEDTENHVEAASSSSSDERIKSETPDTYGSPNTST 540
Query: 666 TDQNEQLAAFVSSLSNSNPMMFAMLNAAGNXXXXXXXXXXXXXXXXXXXXXXSAHDTSNG 487
TDQNEQLAAFVSSLSNSNPMMFAMLNAAGN SAHDTSNG
Sbjct: 541 TDQNEQLAAFVSSLSNSNPMMFAMLNAAGNSTSSAPAPPKSSTSQQRSSSPPSAHDTSNG 600
Query: 486 SMSPSKVDKDPSSFSLSEGHCAAQLMSMALDLEMTMSYHKRRSEIELCFESNRTVDESQG 307
SMSPSKVDKDPSSFSLSEGHCAAQLMSMALDLEMTMSYHKRRSEIELCFESNRTVDESQG
Sbjct: 601 SMSPSKVDKDPSSFSLSEGHCAAQLMSMALDLEMTMSYHKRRSEIELCFESNRTVDESQG 660
Query: 306 AASRKVICLTDLGKEIKITERINGSVKDTELWVKTDFNQFHWAIRGKCQKSADAXXXXXX 127
AASRKVICLTDLGKEIKITERINGSVKDTELWVKTDFNQFHWAIRGKCQKSADA
Sbjct: 661 AASRKVICLTDLGKEIKITERINGSVKDTELWVKTDFNQFHWAIRGKCQKSADASRVPPL 720
Query: 126 XXXXXXXXXXXXXXXXXXXXXXXXXXPTHSFLMRWSFLCTL 4
PTHSFLMRWSFLCTL
Sbjct: 721 VVKPRSSRRSPQPVRRRPPGPRDVSSPTHSFLMRWSFLCTL 761
>gi|39584813|emb|CAE67708.1| Hypothetical protein CBG13281
[Caenorhabditis briggsae]
Length = 803
Score = 637 bits (1642), Expect = 0.0
Identities = 332/492 (67%), Positives = 371/492 (74%), Gaps = 26/492 (5%)
Frame = -1
Query: 1554 MARRKQQESTLVIDPSHSKDDSAFFEGSSGSDAPSTIDTTQLMALLEQXXXXXXXXXXXX 1375
M+RRKQQ+STLV++ HSKDDSAF++ S +D + ID +QLMALLEQ
Sbjct: 316 MSRRKQQDSTLVMEHPHSKDDSAFYDSSIATDG-AEIDASQLMALLEQHTASSSSSSVT- 373
Query: 1374 XSENPIXXXXXXXXXXXXXXXXXXXXXXTAARASEILFAAGMRPHKKTSEIWEHYKCLNE 1195
E P+ AARA+EILFAAGMRPHKKTSEIWEHYKCLNE
Sbjct: 374 --EAPMVAALLKKETMDKELSPLT-----AARANEILFAAGMRPHKKTSEIWEHYKCLNE 426
Query: 1194 KQNVECIYCWKVLKRNDSSTKSMWGHMNAYHQDILRDGTTRKKVKRPANG--LDFDETPT 1021
KQNVECIYCWKVLKRNDSSTKSMWGHMNAYHQD+LRDGTTRKK+KRPA +DFDETPT
Sbjct: 427 KQNVECIYCWKVLKRNDSSTKSMWGHMNAYHQDVLRDGTTRKKIKRPAGSGCMDFDETPT 486
Query: 1020 QPYVKRVRGGAGSSSS-----LPSMVKMDQKPMLDSMAFLQQLQQSGSLTEADFSSFANG 856
QPYVKRVRGG +S+ LPSMVKM+QKP++DSMAF QQLQQ+G+L++ADFSSFANG
Sbjct: 487 QPYVKRVRGGGNTSTGSVPHGLPSMVKMEQKPIIDSMAFFQQLQQTGTLSDADFSSFANG 546
Query: 855 SSLNFLDSLPKSSEVININSGFVKKEEMEEDTENHVEXXXXXXSDERIKSETPDTYGSPN 676
SSLNFLDSLPKSSEVININSGFVKKEE+E+DTENHVE +DE +KSE+PDTYGSPN
Sbjct: 547 SSLNFLDSLPKSSEVININSGFVKKEELEDDTENHVEAASSSSTDEPVKSESPDTYGSPN 606
Query: 675 TSTTDQNEQLAAFVSSLSNSNPMMFAMLNAAGNX-------------------XXXXXXX 553
TST + N QLA FV SLSN+NP+MFAMLNAAG
Sbjct: 607 TSTNEDN-QLADFVRSLSNTNPVMFAMLNAAGAGNSTPPQSFPSVSTQSSKPPTTASTAT 665
Query: 552 XXXXXXXXXXXXXXSAHDTSNGSMSPSKVDKDPSSFSLSEGHCAAQLMSMALDLEMTMSY 373
+ HDTSNGS+SPSK++KDPSSFSLSEGHCAAQLMSMALDLEMTMSY
Sbjct: 666 SVTVNTATRSASPTTTHDTSNGSLSPSKLEKDPSSFSLSEGHCAAQLMSMALDLEMTMSY 725
Query: 372 HKRRSEIELCFESNRTVDESQGAASRKVICLTDLGKEIKITERINGSVKDTELWVKTDFN 193
HKRR +IELCFESN+TVD QG RKVICLTDLGKEI+ITERING+VKDTELWVKTDFN
Sbjct: 726 HKRRLDIELCFESNKTVDGKQGV--RKVICLTDLGKEIRITERINGAVKDTELWVKTDFN 783
Query: 192 QFHWAIRGKCQK 157
QFHWAIRGKCQK
Sbjct: 784 QFHWAIRGKCQK 795
Score = 270 bits (690), Expect = 1e-70
Identities = 153/257 (59%), Positives = 173/257 (66%), Gaps = 13/257 (5%)
Frame = -1
Query: 2286 MTSLLGGNFTEALHTVLSNQLNVMSQKTXXXXXXXXXXXXXXXXXXXXXXXSLV-SAGIS 2110
MTSLLGG F++ALHT L++QLNV+SQKT SL+ +AG+
Sbjct: 1 MTSLLGGPFSDALHTALASQLNVLSQKTSDSDGPTTFSSSSSVDSPPYDPMSLIGTAGMV 60
Query: 2109 DQNG-LMDMFKDGLFATLV--PPTDVANSDTXXXXXXXXXXXXXXXXXXXXXXXXXXXXA 1939
+QNG ++DMFK+GLFA LV PPTDVA+SDT A
Sbjct: 61 EQNGAILDMFKEGLFAALVNPPPTDVAHSDTASSESPEPVAPSGEHEENQNGTEENHSAA 120
Query: 1938 LSLIQSFGTPIPSKFEDIESQFFSEATIRDLMPVLASVQ----GSPPH-----NQNQLSF 1786
LSLIQSFGTPI + D FS+ATIRDLMPVLA+ Q GS P+ N L+
Sbjct: 121 LSLIQSFGTPIGNSESD-----FSDATIRDLMPVLAAAQAPNGGSSPYGGSGSNGLHLAA 175
Query: 1785 GSTSSPSAWARNAGRKKSHPVWDFFKDMKDSTGAGGVICLHCSWSGDDRSPNNLRTHLKK 1606
GS SSPSAWARNAGRKKSHPVWDFFKD+KDSTGAGGVICLHC+WSGDDRSPNNLRTHLKK
Sbjct: 176 GSNSSPSAWARNAGRKKSHPVWDFFKDLKDSTGAGGVICLHCTWSGDDRSPNNLRTHLKK 235
Query: 1605 FHSDDGIFNRFSEKLAK 1555
FHSDDGIFNRFSEKLAK
Sbjct: 236 FHSDDGIFNRFSEKLAK 252