Homology by BLASTX


BLASTX 2.2.4 [Aug-26-2002]
Query= Y47D3A_5
         (681 letters)

Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
           1,967,186 sequences; 661,712,633 total letters


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|17555932|ref|NP_499439.1| putative protein (3M258) [Caenorhab...   331   7e-90
gi|31043846|emb|CAB55095.3| Hypothetical protein Y47D3A.5 [Caeno...   319   4e-86
gi|7509920|pir||T31537 hypothetical protein Y47D3A.5 - Caenorhab...    61   2e-08
gi|6323786|ref|NP_013857.1| DNA cross-link repair protein; Pso2p...    35   1.4
gi|27151713|sp|O13944|YEH1_SCHPO Oxysterol-binding protein homol...    35   1.8
gi|19114317|ref|NP_593405.1| hypothetical protein; putative oxys...    35   1.8
gi|2098826|gb|AAB57702.1| 347-kDa polyprotein [Citrus tristeza v...    35   1.8
gi|25012176|gb|AAN71205.1| GH27257p [Drosophila melanogaster]          34   2.4
gi|28829695|gb|AAO52211.1| similar to Suppressor of mutant AC40 ...    34   2.4
gi|6978469|ref|NP_037349.1| afadin [Rattus norvegicus] >gnl|BL_O...    34   2.4
gi|5420387|emb|CAB46679.1| proteophosphoglycan [Leishmania major]      34   2.4
gi|5052478|gb|AAD38569.1| BcDNA.GH01918 [Drosophila melanogaster]      34   2.4
gi|24656811|ref|NP_647811.2| CG12076-PA [Drosophila melanogaster...    34   2.4
gi|8895467|gb|AAF80976.1| retonoic acid receptor gamma 2I [Ambys...    34   2.4
gi|24656816|ref|NP_728876.1| CG12076-PB [Drosophila melanogaster...    34   2.4
gi|7514080|pir||T42092 s-afadin - rat >gnl|BL_ORD_ID|80964 gi|25...    34   2.4
gi|11359723|pir||T46707 proteophosphoglycan, membrane-associated...    34   3.1
gi|32405506|ref|XP_323366.1| predicted protein [Neurospora crass...    34   3.1
gi|50363075|gb|AAT75280.1| p349 [Citrus tristeza virus]                34   3.1
gi|13592175|gb|AAK31375.1| ppg3 [Leishmania major]                     34   3.1
gi|39979238|emb|CAE85608.1| putative protein [Neurospora crassa]       34   3.1
gi|50750093|ref|XP_421866.1| PREDICTED: similar to BRCA1-associa...    34   3.1
gi|41056694|gb|AAR98740.1| ASPM [Saimiri boliviensis]                  34   3.1
gi|38105576|gb|EAA51989.1| hypothetical protein MG03584.4 [Magna...    33   4.0
gi|26247459|ref|NP_753499.1| Hypothetical protein [Escherichia c...    33   4.0
gi|7839607|gb|AAF70348.1| p349 protein [Citrus tristeza virus]         33   4.0
gi|50754515|ref|XP_414418.1| PREDICTED: similar to MAGI1c alpha ...    33   5.2
gi|6322068|ref|NP_012143.1| (putative) invovled in control of DN...    33   5.2
gi|50363081|gb|AAT75283.1| p349 [Citrus tristeza virus]                33   5.2
gi|50363085|gb|AAT75285.1| p349 [Citrus tristeza virus]                33   5.2
gi|50363079|gb|AAT75282.1| p349 [Citrus tristeza virus]                33   5.2
gi|50363083|gb|AAT75284.1| p349 [Citrus tristeza virus]                33   5.2
gi|50363071|gb|AAT75278.1| p349 [Citrus tristeza virus]                33   5.2
gi|18416110|ref|NP_568219.1| nuclear matrix protein-related [Ara...    33   5.2
gi|23463069|gb|AAN33204.1| At5g09860/MYH9_7 [Arabidopsis thaliana]     33   5.2
gi|15281150|ref|NP_076928.1| unkempt-like; unkempt (Drosophila)-...    33   5.2
gi|9758964|dbj|BAB09407.1| unnamed protein product [Arabidopsis ...    33   5.2
gi|4239715|emb|CAA77161.1| p349 protein [Citrus tristeza virus]        33   5.2
gi|23485601|gb|EAA20486.1| vacuolar protein sorting homolog r-vp...    33   6.9
gi|33468665|emb|CAE30400.1| SI:zC237L4.4 (novel protein similar ...    33   6.9
gi|11414864|dbj|BAB18522.1| 349-kDa polyprotein [Citrus tristeza...    33   6.9
gi|31455416|emb|CAD92594.1| dJ470B24.1.1 (myeloid/lymphoid or mi...    32   8.9
gi|215028|gb|AAB59953.1| retinoic acid receptor gamma-2                32   8.9
gi|31455415|emb|CAD92593.1| dJ470B24.1.2 (myeloid/lymphoid or mi...    32   8.9
gi|39594290|emb|CAE71868.1| Hypothetical protein CBG18920 [Caeno...    32   8.9
gi|47209248|emb|CAF94350.1| unnamed protein product [Tetraodon n...    32   8.9
gi|41056700|gb|AAR98743.1| ASPM [Aotus sp. PDE-2004]                   32   8.9
gi|17367843|sp|Q9W6B3|RRB_COTJA Retinoic acid receptor beta (RAR...    32   8.9
gi|45384512|ref|NP_990657.1| retinoic acid receptor beta [Gallus...    32   8.9
gi|49067460|ref|XP_398020.1| hypothetical protein UM00405.1 [Ust...    32   8.9
gi|104852|pir||S13512 retinoic acid receptor beta-1 - chicken >g...    32   8.9
gi|12644018|sp|P55196|AF6_HUMAN AF-6 protein >gnl|BL_ORD_ID|1578...    32   8.9
gi|24308525|ref|NP_571414.1| retinoic acid receptor gamma; etID3...    32   8.9
gi|3452574|dbj|BAA32485.1| AF-6 [Homo sapiens]                         32   8.9
gi|5174575|ref|NP_005927.1| myeloid/lymphoid or mixed-lineage le...    32   8.9
gi|11360251|pir||T47137 hypothetical protein DKFZp761K2213.1 - h...    32   8.9
gi|234371|gb|AAB19628.1| retinoic acid receptor-beta; RAR-beta [...    32   8.9
gi|49483625|ref|YP_040849.1| very large surface anchored protein...    32   8.9
gi|19070694|gb|AAL83960.1| cell surface protein A [Streptococcus...    32   8.9
gi|31455414|emb|CAD92592.1| dJ470B24.1.3 (myeloid/lymphoid or mi...    32   8.9
gi|31204765|ref|XP_311331.1| ENSANGP00000001657 [Anopheles gambi...    32   8.9
gi|31455413|emb|CAD92591.1| dJ470B24.1.4 (myeloid/lymphoid or mi...    32   8.9
gi|62979|emb|CAA40615.1| retinoic acid receptor beta,isoform 4 [...    32   8.9
gi|62977|emb|CAA40616.1| retinoic acid receptor beta [Gallus gal...    32   8.9
gi|3452572|dbj|BAA32483.1| AF-6 [Homo sapiens]                         32   8.9
gi|280730|pir||A43786 retinoic acid receptor beta-4 - chicken >g...    32   8.9


>gi|17555932|ref|NP_499439.1| putative protein (3M258)
           [Caenorhabditis elegans]
          Length = 226

 Score =  331 bits (849), Expect = 7e-90
 Identities = 180/214 (84%), Positives = 180/214 (84%)
 Frame = -1

Query: 681 MDVFLSVDEEYVNLTELKPAPAEKQQKSGATYVDLADVRSQLXXXXPSVGPKGVRLAPKK 502
           MDVFLSVDEEYVNLTELKPAPAEKQQKSGATYVDLADVRSQL    PSVGPKGVRLAPKK
Sbjct: 1   MDVFLSVDEEYVNLTELKPAPAEKQQKSGATYVDLADVRSQLPPPPPSVGPKGVRLAPKK 60

Query: 501 PHQHRPRRQFRSVRLPRTPSRNSXXXXXXXXXXXXXXXXXXXXXPVAPRTPGKVVISSVE 322
           PHQHRPRRQFRSVRLPRTPSRNS                     PVAPRTPGKVVISSVE
Sbjct: 61  PHQHRPRRQFRSVRLPRTPSRNSPLTPPTKTPPHTPTRTPTTESPVAPRTPGKVVISSVE 120

Query: 321 KQESSEIIVAPDESTIAATXXXXXXXXXKEQNYDDEVSVRDSLFEDVGDTKSPPDFLTVR 142
           KQESSEIIVAPDESTIAAT         KEQNYDDEVSVRDSLFEDVGDTKSPPDFLTVR
Sbjct: 121 KQESSEIIVAPDESTIAATPKKSSKKSPKEQNYDDEVSVRDSLFEDVGDTKSPPDFLTVR 180

Query: 141 VCNVLVLILSSIVFSIWILTTLASVHVVEIPFFE 40
           VCNVLVLILSSIVFSIWILTTLASVHVVEIPFFE
Sbjct: 181 VCNVLVLILSSIVFSIWILTTLASVHVVEIPFFE 214




[DB home][top]