Homology by BLASTX
BLASTX 2.2.4 [Aug-26-2002]
Query= Y39G8C_2
(3630 letters)
Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
1,967,186 sequences; 661,712,633 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|32564611|ref|NP_496945.2| putative 5-3 exonuclease domain con... 2326 0.0
gi|7509723|pir||T26774 hypothetical protein Y39G8C.b - Caenorhab... 1960 0.0
gi|39591343|emb|CAE73396.1| Hypothetical protein CBG20837 [Caeno... 1781 0.0
gi|24474444|gb|AAN11306.1| DNA strand-exchange protein SEP1 [Hom... 732 0.0
gi|40254887|ref|NP_061874.2| 5'-3' exoribonuclease 1; strand-exc... 729 0.0
gi|6756025|ref|NP_036046.1| 5'-3' exoribonuclease 1 [Mus musculu... 686 0.0
gi|7513645|pir||T30174 exoribonuclease, variant 1 - mouse >gnl|B... 684 0.0
gi|7513646|pir||T30175 exoribonuclease, variant 2 - mouse >gnl|B... 684 0.0
gi|31209497|ref|XP_313715.1| ENSANGP00000003801 [Anopheles gambi... 677 0.0
gi|34865790|ref|XP_217233.2| similar to 5-3 exonuclease [Rattus ... 676 0.0
gi|47216611|emb|CAG10909.1| unnamed protein product [Tetraodon n... 674 0.0
gi|6321265|ref|NP_011342.1| 5'-3' exonuclease involved in mRNA d... 622 e-176
gi|24643245|ref|NP_523408.2| CG3291-PA [Drosophila melanogaster]... 606 e-171
gi|19114394|ref|NP_593482.1| exonuclease ii [Schizosaccharomyces... 603 e-171
gi|49119972|ref|XP_412322.1| hypothetical protein AN8185.2 [Aspe... 599 e-169
gi|50257740|gb|EAL20441.1| hypothetical protein CNBE3620 [Crypto... 589 e-166
gi|32412968|ref|XP_326964.1| hypothetical protein [Neurospora cr... 583 e-164
gi|50293237|ref|XP_449030.1| unnamed protein product [Candida gl... 571 e-161
gi|45187827|ref|NP_984050.1| ADL046Cp [Eremothecium gossypii] >g... 569 e-160
gi|4914494|emb|CAB43711.1| pacman protein [Drosophila melanogaster] 566 e-159
gi|50549393|ref|XP_502167.1| hypothetical protein [Yarrowia lipo... 564 e-159
gi|46444252|gb|EAL03528.1| hypothetical protein CaO19.12434 [Can... 538 e-151
gi|46124843|ref|XP_386975.1| hypothetical protein FG06799.1 [Gib... 524 e-147
gi|50312097|ref|XP_456080.1| unnamed protein product [Kluyveromy... 521 e-146
gi|50419539|ref|XP_458296.1| unnamed protein product [Debaryomyc... 506 e-141
gi|46444129|gb|EAL03406.1| hypothetical protein CaO19.4969 [Cand... 485 e-135
gi|21755602|dbj|BAC04718.1| unnamed protein product [Homo sapiens] 472 e-131
gi|29126940|gb|AAH48104.1| Unknown (protein for IMAGE:4820049) [... 469 e-130
gi|32766355|gb|AAH55175.1| Zgc:63635 protein [Danio rerio] 467 e-130
gi|34858884|ref|XP_342536.1| similar to 5-3 exoribonuclease 2; D... 441 e-122
gi|26327149|dbj|BAC27318.1| unnamed protein product [Mus musculus] 437 e-120
gi|30173483|sp|Q9DBR1|XRN2_MOUSE 5'-3' exoribonuclease 2 (Dhm1 p... 437 e-120
gi|18860916|ref|NP_036387.2| 5'-3' exoribonuclease 2; Dhm1-like ... 436 e-120
gi|50423089|ref|XP_460123.1| unnamed protein product [Debaryomyc... 436 e-120
gi|5881961|gb|AAD55138.1| Dhm1-like protein [Homo sapiens] 435 e-120
gi|20129299|ref|NP_609082.1| CG10354-PA [Drosophila melanogaster... 434 e-120
gi|6756027|ref|NP_036047.1| 5'-3' exoribonuclease 2 [Mus musculu... 429 e-118
gi|50550657|ref|XP_502801.1| hypothetical protein [Yarrowia lipo... 427 e-117
gi|9759012|dbj|BAB09325.1| 5'-3' exoribonuclease 2 [Arabidopsis ... 423 e-116
gi|13605795|gb|AAK32883.1| AT5g42540/K16E1_1 [Arabidopsis thalia... 422 e-116
gi|15238990|ref|NP_199069.1| 5'-3' exoribonuclease (XRN2) [Arabi... 422 e-116
gi|33337899|gb|AAQ13577.1| DHP protein [Homo sapiens] 421 e-116
gi|25404987|pir||D96786 protein F10A5.15 [imported] - Arabidopsi... 419 e-115
gi|22531090|gb|AAM97049.1| unknown protein [Arabidopsis thaliana... 419 e-115
gi|18410905|ref|NP_565114.1| 5'-3' exoribonuclease (XRN3) [Arabi... 419 e-115
gi|49068786|ref|XP_398682.1| hypothetical protein UM01067.1 [Ust... 418 e-115
gi|34908706|ref|NP_915700.1| putative 5-3 exoribonuclease [Oryza... 411 e-113
gi|42733860|gb|AAS38778.1| similar to exonuclease ii [Schizosacc... 404 e-111
gi|13277303|emb|CAC34446.1| dJ198K11.2.2 (5'-3' exoribonuclease ... 403 e-110
gi|46444743|gb|EAL04016.1| hypothetical protein CaO19.4681 [Cand... 400 e-110
gi|7576278|emb|CAB87949.1| dJ198K11.2.1 (5'-3' exoribonuclease 2... 387 e-106
gi|17537183|ref|NP_496958.1| 5'-3' exoribonuclease 2 (101.3 kD) ... 376 e-102
gi|50751974|ref|XP_422596.1| PREDICTED: similar to DNA strand-ex... 315 4e-84
gi|50080164|ref|NP_001001944.1| 5'-3' exoribonuclease 2 [Danio r... 313 1e-83
gi|50738556|ref|XP_419310.1| PREDICTED: similar to 5-3 exoribonu... 308 5e-82
gi|45201399|ref|NP_986969.1| AGR303Wp [Eremothecium gossypii] >g... 306 2e-81
gi|31201387|ref|XP_309641.1| ENSANGP00000004085 [Anopheles gambi... 305 5e-81
gi|39591397|emb|CAE73451.1| Hypothetical protein CBG20900 [Caeno... 304 9e-81
gi|32415205|ref|XP_328082.1| hypothetical protein [Neurospora cr... 303 2e-80
gi|15221841|ref|NP_175851.1| 5'-3' exoribonuclease (XRN4) [Arabi... 301 6e-80
gi|46138403|ref|XP_390892.1| hypothetical protein FG10716.1 [Gib... 301 1e-79
gi|44889966|emb|CAD29606.2| 5'->3'exoribonuclease, putative [Asp... 299 3e-79
gi|50293593|ref|XP_449208.1| unnamed protein product [Candida gl... 298 5e-79
gi|50310793|ref|XP_455419.1| unnamed protein product [Kluyveromy... 298 6e-79
gi|25405738|pir||G96586 hypothetical protein F20D21.30 [imported... 297 1e-78
gi|6324622|ref|NP_014691.1| RNA trafficking protein; transcripti... 297 1e-78
gi|50257253|gb|EAL19962.1| hypothetical protein CNBF2890 [Crypto... 294 1e-77
gi|50400038|gb|AAT76426.1| putative 5'-3' exonuclease [Oryza sat... 293 2e-77
gi|49085446|ref|XP_404844.1| hypothetical protein AN0707.2 [Aspe... 291 6e-77
gi|49080548|ref|XP_403779.1| hypothetical protein UM06164.1 [Ust... 291 8e-77
gi|48139892|ref|XP_393481.1| similar to DNA strand-exchange prot... 290 2e-76
gi|19115067|ref|NP_594155.1| dna exoribonuclease Dhp1p [Schizosa... 285 7e-75
gi|47214629|emb|CAG01470.1| unnamed protein product [Tetraodon n... 284 1e-74
gi|47848619|dbj|BAD22468.1| putative 5'-3' exoribonuclease [Oryz... 267 2e-69
gi|13812165|ref|NP_113293.1| very similar to mouse Dhm1 and Dhm2... 265 5e-69
gi|46229016|gb|EAK89865.1| Kem1p-like 5'-3' exonuclease [Cryptos... 265 8e-69
gi|32398787|emb|CAD98497.1| exonuclease ii, possible [Cryptospor... 265 8e-69
gi|23613613|ref|NP_704634.1| exoribonuclease, putative [Plasmodi... 259 3e-67
gi|23491026|gb|EAA22663.1| Drosophila melanogaster CG10354 gene ... 254 1e-65
gi|46228551|gb|EAK89421.1| Rat1 Kar1/Rat1 like 5'-3' exonuclease... 241 7e-62
gi|47198701|emb|CAF89019.1| unnamed protein product [Tetraodon n... 238 8e-61
gi|29250957|gb|EAA42443.1| GLP_587_9784_12492 [Giardia lamblia A... 219 3e-55
gi|11360319|pir||T43461 probable phosphodiesterase I (EC 3.1.4.1... 185 6e-45
gi|19173198|ref|NP_597001.1| RIBONUCLEIC TRAFFICKING PROTEIN 1 (... 168 8e-40
gi|23508270|ref|NP_700939.1| hypothetical protein [Plasmodium fa... 167 1e-39
gi|13278447|gb|AAH04028.1| Xrn2 protein [Mus musculus] 159 4e-37
gi|7019942|dbj|BAA90934.1| unnamed protein product [Homo sapiens... 156 4e-36
gi|29246501|gb|EAA38095.1| GLP_127_20145_14275 [Giardia lamblia ... 131 1e-28
gi|48095966|ref|XP_392371.1| similar to ENSANGP00000004085 [Apis... 125 6e-27
gi|15078725|ref|NP_149475.1| 012L [Invertebrate iridescent virus... 125 1e-26
gi|23491393|gb|EAA22935.1| very similar to mouse Dhm1 and Dhm2-r... 102 9e-20
gi|16768996|gb|AAL28717.1| LD13761p [Drosophila melanogaster] 99 6e-19
gi|28828135|gb|AAM09355.2| hypothetical protein [Dictyostelium d... 80 5e-13
gi|34900586|ref|NP_911639.1| P0565A07.26 [Oryza sativa (japonica... 54 4e-05
gi|23593274|ref|NP_472969.2| hypothetical protein [Plasmodium fa... 51 2e-04
gi|7494394|pir||A71621 protein with 5'-3' exonuclease domain (Ke... 51 2e-04
gi|23483548|gb|EAA19182.1| protein with 5'-3' exonuclease domain... 47 0.003
gi|48731202|ref|ZP_00264948.1| COG3501: Uncharacterized protein ... 40 0.53
gi|50251322|dbj|BAD28194.1| putative MFAP1 protein [Oryza sativa... 39 0.70
gi|42520020|ref|NP_965935.1| transposase, IS4 family [Wolbachia ... 38 1.6
gi|23508078|ref|NP_700748.1| protoporphyrinogen oxidase, putativ... 37 2.7
gi|28828802|gb|AAO51397.1| similar to Delayed Anaerobic Gene; Da... 37 3.5
gi|22538391|ref|NP_671700.1| A-kinase anchor protein 9 isoform 1... 33 3.5
gi|4584423|emb|CAB40713.1| AKAP450 protein [Homo sapiens] 33 3.5
gi|22538387|ref|NP_005742.4| A-kinase anchor protein 9 isoform 2... 33 3.5
gi|22538393|ref|NP_671714.1| A-kinase anchor protein 9 isoform 3... 33 3.5
gi|4558862|gb|AAD22767.1| A-kinase anchoring protein AKAP350 [Ho... 33 3.5
gi|30142004|gb|AAB96867.2| unknown [Homo sapiens] 33 3.7
gi|7512962|pir||T00637 hypothetical protein H_GS541B18.1 - human... 33 3.7
gi|7512747|pir||T17222 hypothetical protein DKFZp564G2263.1 - hu... 33 4.3
gi|5051743|dbj|BAA78718.1| Centrosome- and Golgi-localized PKN-a... 33 4.5
gi|48770663|ref|ZP_00275006.1| COG0179: 2-keto-4-pentenoate hydr... 36 5.9
gi|39585776|emb|CAE59978.1| Hypothetical protein CBG03470 [Caeno... 36 5.9
>gi|32564611|ref|NP_496945.2| putative 5-3 exonuclease domain
containing protein (137.5 kD) (2O373) [Caenorhabditis
elegans]
gi|25815068|emb|CAC35856.2| Hypothetical protein Y39G8C.1
[Caenorhabditis elegans]
Length = 1195
Score = 2326 bits (6028), Expect = 0.0
Identities = 1146/1209 (94%), Positives = 1146/1209 (94%)
Frame = +1
Query: 1 MGVPKFYRWTSERYPCLSEVINESQIPEFDNLYLDMNGIIHNCSHPNDDDVTFRITEDEI 180
MGVPKFYRWTSERYPCLSEVINESQIPEFDNLYLDMNGIIHNCSHPNDDDVTFRITEDEI
Sbjct: 1 MGVPKFYRWTSERYPCLSEVINESQIPEFDNLYLDMNGIIHNCSHPNDDDVTFRITEDEI 60
Query: 181 FVNIFAYIENLYNLIRPQKVFFMAVDGVAPRAKMNQQRARRFMYVEELLLAGKKEIWSAR 360
FVNIFAYIENLYNLIRPQKVFFMAVDGVAPRAKMNQQRARRFM SAR
Sbjct: 61 FVNIFAYIENLYNLIRPQKVFFMAVDGVAPRAKMNQQRARRFM--------------SAR 106
Query: 361 TAHTQLAKALENGEIMPSEARFDSNCITPGTYFMTRLHQKLDDWIKTKSATDSRWQGRKI 540
TAHTQLAKALENGEIMPSEARFDSNCITPGTYFMTRLHQKLDDWIKTKSATDSRWQGRKI
Sbjct: 107 TAHTQLAKALENGEIMPSEARFDSNCITPGTYFMTRLHQKLDDWIKTKSATDSRWQGRKI 166
Query: 541 ILSGHNVPGEGEHKIMDFIRTERAGSSYDPNTRHCMYGLDADLIMLGIVSHEPHFSLLRE 720
ILSGHNVPGEGEHKIMDFIRTERAGSSYDPNTRHCMYGLDADLIMLGIVSHEPHFSLLRE
Sbjct: 167 ILSGHNVPGEGEHKIMDFIRTERAGSSYDPNTRHCMYGLDADLIMLGIVSHEPHFSLLRE 226
Query: 721 EVTFNTRPRKNDNKATKKPKRTDSDVKKFXXXXXXXXREYLAWEFADVKDSLPFEYEMER 900
EVTFNTRPRKNDNKATKKPKRTDSDVKKF REYLAWEFADVKDSLPFEYEMER
Sbjct: 227 EVTFNTRPRKNDNKATKKPKRTDSDVKKFHLLHLSLLREYLAWEFADVKDSLPFEYEMER 286
Query: 901 IVDDWILLGLLVGNDFLPHLPNIHIHDDALPLLYSTYKKVLPTLDGYINEAGYLNLSRFE 1080
IVDDWILLGLLVGNDFLPHLPNIHIHDDALPLLYSTYKKVLPTLDGYINEAGYLNLSRFE
Sbjct: 287 IVDDWILLGLLVGNDFLPHLPNIHIHDDALPLLYSTYKKVLPTLDGYINEAGYLNLSRFE 346
Query: 1081 AFLAELALNDKTSFMERLEDEQFMESKRIRVVDPEQQELAEPELVAFESSDVXXXXXXXX 1260
AFLAELALNDKTSFMERLEDEQFMESKRIRVVDPEQQELAEPELVAFESSDV
Sbjct: 347 AFLAELALNDKTSFMERLEDEQFMESKRIRVVDPEQQELAEPELVAFESSDVEDEAGAEE 406
Query: 1261 XXXXXXXXXXXXXXXXXXFVSDHEEDGDDLEPGSGSDELLLSNLDAQLLEDEFNDELATL 1440
FVSDHEEDGDDLEPGSGSDELLLSNLDAQLLEDEFNDELATL
Sbjct: 407 SKDEAGGAGAEDDEDDAAFVSDHEEDGDDLEPGSGSDELLLSNLDAQLLEDEFNDELATL 466
Query: 1441 ALSGMNDADFANDVEACWTKTINNQFKRHKKTYYSDKLRYKNISKQQLREQAEGYVRAIQ 1620
ALSGMNDADFANDVEACWTKTINNQFKRHKKTYYSDKLRYKNISKQQLREQAEGYVRAIQ
Sbjct: 467 ALSGMNDADFANDVEACWTKTINNQFKRHKKTYYSDKLRYKNISKQQLREQAEGYVRAIQ 526
Query: 1621 WNLHYYYHGCVSWSWFYPHHYAPFISDVRGFVGMRMEFELSEPFHPFEQLLAVLPEASAD 1800
WNLHYYYHGCVSWSWFYPHHYAPFISDVRGFVGMRMEFELSEPFHPFEQLLAVLPEASAD
Sbjct: 527 WNLHYYYHGCVSWSWFYPHHYAPFISDVRGFVGMRMEFELSEPFHPFEQLLAVLPEASAD 586
Query: 1801 CLPRPLRELMSSDPAKSPICDFYPANFETDLNGKRNEWEAVVLIPFIEEKRLLEAIEAKR 1980
CLPRPLRELMSSDPAKSPICDFYPANFETDLNGKRNEWEAVVLIPFIEEKRLLEAIEAKR
Sbjct: 587 CLPRPLRELMSSDPAKSPICDFYPANFETDLNGKRNEWEAVVLIPFIEEKRLLEAIEAKR 646
Query: 1981 SRLTSEENARNSHGSHIQCISSPEPPNSQGQWRTVRSEIPQDSFRIPRSQVKWGLLPNVK 2160
SRLTSEENARNSHGSHIQCISSPEPPNSQGQWRTVRSEIPQDSFRIPRSQVKWGLLPNVK
Sbjct: 647 SRLTSEENARNSHGSHIQCISSPEPPNSQGQWRTVRSEIPQDSFRIPRSQVKWGLLPNVK 706
Query: 2161 MDVYFPGFPTMKHLSHLGELRFANCNIFGMASRKESMVLKVENERAHTDIIELGSELCDE 2340
MDVYFPGFPTMKHLSHLGELRFANCNIFGMASRKESMVLKVENERAHTDIIELGSELCDE
Sbjct: 707 MDVYFPGFPTMKHLSHLGELRFANCNIFGMASRKESMVLKVENERAHTDIIELGSELCDE 766
Query: 2341 EVCIDWPILKVAKIDSIWGGDDKIVRKCDDEIIVKDMSEEEKRQWQAHANQLTEHLMTRF 2520
EVCIDWPILKVAKIDSIWGGDDKIVRKCDDEIIVKDMSEEEKRQWQAHANQLTEHLMTRF
Sbjct: 767 EVCIDWPILKVAKIDSIWGGDDKIVRKCDDEIIVKDMSEEEKRQWQAHANQLTEHLMTRF 826
Query: 2521 AIEIAAQKDSKGKHIRPAVAWVRKFTGLVYEAQGGGKEPSVLKACKQWSSPQQXXXXXXX 2700
AIEIAAQKDSKGKHIRPAVAWVRKFTGLVYEAQGGGKEPSVLKACKQWSSPQQ
Sbjct: 827 AIEIAAQKDSKGKHIRPAVAWVRKFTGLVYEAQGGGKEPSVLKACKQWSSPQQLMPVLLP 886
Query: 2701 XXXXXXXXENSRVLADLPMKQAYPKQSIVWITDPKFALFGMPGMVNGFSNEKSADCRIEV 2880
ENSRVLADLPMKQAYPKQSIVWITDPKFALFGMPGMVNGFSNEKSADCRIEV
Sbjct: 887 LVVKDVLLENSRVLADLPMKQAYPKQSIVWITDPKFALFGMPGMVNGFSNEKSADCRIEV 946
Query: 2881 IGMSTQNKVDKMEALRKKMEQKSLRWMGGYDCARQCQVDTRLFARITGTMFLWNEPRERV 3060
IGMSTQNKVDKMEALRKKMEQKSLRWMGGYDCARQCQVDTRLFARITGTMFLWNEPRERV
Sbjct: 947 IGMSTQNKVDKMEALRKKMEQKSLRWMGGYDCARQCQVDTRLFARITGTMFLWNEPRERV 1006
Query: 3061 EKGQQISSSDSKINCGLALKYSRRDLCVADYTDRTEHTNQRGVTNKVWFYTNLATRLVSE 3240
EKGQQISSSDSKINCGLALKYSRRDLCVADYTDRTEHTNQRGVTNKVWFYTNLATRLVSE
Sbjct: 1007 EKGQQISSSDSKINCGLALKYSRRDLCVADYTDRTEHTNQRGVTNKVWFYTNLATRLVSE 1066
Query: 3241 YRRKFPDVWKYLETIGLTQQDDVYYTEDIWSNEKTREKRFGELSEFLGGLPSLEAEQLKC 3420
YRRKFPDVWKYLETIGLTQQDDVYYTEDIWSNEKTREKRFGELSEFLGGLPSLEAEQLKC
Sbjct: 1067 YRRKFPDVWKYLETIGLTQQDDVYYTEDIWSNEKTREKRFGELSEFLGGLPSLEAEQLKC 1126
Query: 3421 GTVYADRQLITEIEMILAEPDEKKPVMNKYMMAPGALFRYELYNGKVHADPAADFQILDR 3600
GTVYADRQLITEIEMILAEPDEKKPVMNKYMMAPGALFRYELYNGKVHADPAADFQILDR
Sbjct: 1127 GTVYADRQLITEIEMILAEPDEKKPVMNKYMMAPGALFRYELYNGKVHADPAADFQILDR 1186
Query: 3601 VALMSSDTV 3627
VALMSSDTV
Sbjct: 1187 VALMSSDTV 1195
>gi|7509723|pir||T26774 hypothetical protein Y39G8C.b - Caenorhabditis
elegans
Length = 1801
Score = 1960 bits (5078), Expect = 0.0
Identities = 973/1061 (91%), Positives = 973/1061 (91%), Gaps = 39/1061 (3%)
Frame = +1
Query: 559 VPGEGEHKIMDFIRTERAGSSYDPNTRHCMYGLDADLIMLGIVSHEPHFSLLREEVTFNT 738
VPGEGEHKIMDFIRTERAGSSYDPNTRHCMYGLDADLIMLGIVSHEPHFSLLREEVTFNT
Sbjct: 269 VPGEGEHKIMDFIRTERAGSSYDPNTRHCMYGLDADLIMLGIVSHEPHFSLLREEVTFNT 328
Query: 739 RPRKNDNKATKKPKRTDSDVKKFXXXXXXXXREYLAWEFADVKDSLPFEYEMERIVDDWI 918
RPRKNDNKATKKPKRTDSDVKKF REYLAWEFADVKDSLPFEYEMERIVDDWI
Sbjct: 329 RPRKNDNKATKKPKRTDSDVKKFHLLHLSLLREYLAWEFADVKDSLPFEYEMERIVDDWI 388
Query: 919 LLGLLVGNDFLPHLPNIHIHDDALPLLYSTYKKVLPTLDGYINEAGYLNLSRFEAFLAEL 1098
LLGLLVGNDFLPHLPNIHIHDDALPLLYSTYKKVLPTLDGYINEAGYLNLSRFEAFLAEL
Sbjct: 389 LLGLLVGNDFLPHLPNIHIHDDALPLLYSTYKKVLPTLDGYINEAGYLNLSRFEAFLAEL 448
Query: 1099 ALNDKTSFMERLEDEQFMESKRIRVVDPEQQELAEPELVAFESSDVXXXXXXXXXXXXXX 1278
ALNDKTSFMERLEDEQFMESKRIRVVDPEQQELAEPELVAFESSDV
Sbjct: 449 ALNDKTSFMERLEDEQFMESKRIRVVDPEQQELAEPELVAFESSDVEDEAGAEESKDEAG 508
Query: 1279 XXXXXXXXXXXXFVSDHEEDGDDLEPGSGSDELLLSNLDAQLLEDEFNDELATLALSGMN 1458
FVSDHEEDGDDLEPGSGSDELLLSNLDAQLLEDEFNDELATLALSGMN
Sbjct: 509 GAGAEDDEDDAAFVSDHEEDGDDLEPGSGSDELLLSNLDAQLLEDEFNDELATLALSGMN 568
Query: 1459 DADFANDVEACWTKTINNQFKRHKKTYYSDKLRYKNISKQQLREQAEGYVRAIQWNLHYY 1638
DADFANDVEACWTKTINNQFKRHKKTYYSDKLRYKNISKQQLREQAEGYVRAIQWNLHYY
Sbjct: 569 DADFANDVEACWTKTINNQFKRHKKTYYSDKLRYKNISKQQLREQAEGYVRAIQWNLHYY 628
Query: 1639 YHGCVSWSWFYPHHYAPFISDVRGFVGMRMEFELSEPFHPFEQLLAVLPEASADCLPRPL 1818
YHGCVSWSWFYPHHYAPFISDVRGFVGMRMEFELSEPFHPFEQLLAVLPEASADCLPRPL
Sbjct: 629 YHGCVSWSWFYPHHYAPFISDVRGFVGMRMEFELSEPFHPFEQLLAVLPEASADCLPRPL 688
Query: 1819 RELMSSDPAKSPICDFYPANFETDLNGKRNEWEAVVLIPFIEEKRLLEAIEAKRSRLTSE 1998
RELMSSDPAKSPICDFYPANFETDLNGKRNEWEAVVLIPFIEEKRLLEAIEAKRSRLTSE
Sbjct: 689 RELMSSDPAKSPICDFYPANFETDLNGKRNEWEAVVLIPFIEEKRLLEAIEAKRSRLTSE 748
Query: 1999 ENARNSHGSHIQCISSPEPPNSQGQWRTVRSEIPQDSFRIPRSQVKWGLLPNVKMDVYFP 2178
ENARNSHGSHIQCISSPEPPNSQGQWRTVRSEIPQDSFRIPRSQVKWGLLPNVKMDVYFP
Sbjct: 749 ENARNSHGSHIQCISSPEPPNSQGQWRTVRSEIPQDSFRIPRSQVKWGLLPNVKMDVYFP 808
Query: 2179 GFPTMKHLSHLGELRFANCNIFGMASRKESMVLKV------------------------- 2283
GFPTMKHLSHLGELRFANCNIFGMASRKESMVLKV
Sbjct: 809 GFPTMKHLSHLGELRFANCNIFGMASRKESMVLKVSSRRFFFCRFAGNFPANCRFVDLPE 868
Query: 2284 --------------ENERAHTDIIELGSELCDEEVCIDWPILKVAKIDSIWGGDDKIVRK 2421
ENERAHTDIIELGSELCDEEVCIDWPILKVAKIDSIWGGDDKIVRK
Sbjct: 869 LLLFSANRQTVGIVENERAHTDIIELGSELCDEEVCIDWPILKVAKIDSIWGGDDKIVRK 928
Query: 2422 CDDEIIVKDMSEEEKRQWQAHANQLTEHLMTRFAIEIAAQKDSKGKHIRPAVAWVRKFTG 2601
CDDEIIVKDMSEEEKRQWQAHANQLTEHLMTRFAIEIAAQKDSKGKHIRPAVAWVRKFTG
Sbjct: 929 CDDEIIVKDMSEEEKRQWQAHANQLTEHLMTRFAIEIAAQKDSKGKHIRPAVAWVRKFTG 988
Query: 2602 LVYEAQGGGKEPSVLKACKQWSSPQQXXXXXXXXXXXXXXXENSRVLADLPMKQAYPKQS 2781
LVYEAQGGGKEPSVLKACKQWSSPQQ ENSRVLADLPMKQAYPKQS
Sbjct: 989 LVYEAQGGGKEPSVLKACKQWSSPQQLMPVLLPLVVKDVLLENSRVLADLPMKQAYPKQS 1048
Query: 2782 IVWITDPKFALFGMPGMVNGFSNEKSADCRIEVIGMSTQNKVDKMEALRKKMEQKSLRWM 2961
IVWITDPKFALFGMPGMVNGFSNEKSADCRIEVIGMSTQNKVDKMEALRKKMEQKSLRWM
Sbjct: 1049 IVWITDPKFALFGMPGMVNGFSNEKSADCRIEVIGMSTQNKVDKMEALRKKMEQKSLRWM 1108
Query: 2962 GGYDCARQCQVDTRLFARITGTMFLWNEPRERVEKGQQISSSDSKINCGLALKYSRRDLC 3141
GGYDCARQCQVDTRLFARITGTMFLWNEPRERVEKGQQISSSDSKINCGLALKYSRRDLC
Sbjct: 1109 GGYDCARQCQVDTRLFARITGTMFLWNEPRERVEKGQQISSSDSKINCGLALKYSRRDLC 1168
Query: 3142 VADYTDRTEHTNQRGVTNKVWFYTNLATRLVSEYRRKFPDVWKYLETIGLTQQDDVYYTE 3321
VADYTDRTEHTNQRGVTNKVWFYTNLATRLVSEYRRKFPDVWKYLETIGLTQQDDVYYTE
Sbjct: 1169 VADYTDRTEHTNQRGVTNKVWFYTNLATRLVSEYRRKFPDVWKYLETIGLTQQDDVYYTE 1228
Query: 3322 DIWSNEKTREKRFGELSEFLGGLPSLEAEQLKCGTVYADRQLITEIEMILAEPDEKKPVM 3501
DIWSNEKTREKRFGELSEFLGGLPSLEAEQLKCGTVYADRQLITEIEMILAEPDEKKPVM
Sbjct: 1229 DIWSNEKTREKRFGELSEFLGGLPSLEAEQLKCGTVYADRQLITEIEMILAEPDEKKPVM 1288
Query: 3502 NKYMMAPGALFRYELYNGKVHADPAADFQILDRVALMSSDT 3624
NKYMMAPGALFRYELYNGKVHADPAADFQILDRVALMSSDT
Sbjct: 1289 NKYMMAPGALFRYELYNGKVHADPAADFQILDRVALMSSDT 1329
Score = 387 bits (995), Expect = e-106
Identities = 187/191 (97%), Positives = 187/191 (97%)
Frame = +1
Query: 1 MGVPKFYRWTSERYPCLSEVINESQIPEFDNLYLDMNGIIHNCSHPNDDDVTFRITEDEI 180
MGVPKFYRWTSERYPCLSEVINESQIPEFDNLYLDMNGIIHNCSHPNDDDVTFRITEDEI
Sbjct: 1 MGVPKFYRWTSERYPCLSEVINESQIPEFDNLYLDMNGIIHNCSHPNDDDVTFRITEDEI 60
Query: 181 FVNIFAYIENLYNLIRPQKVFFMAVDGVAPRAKMNQQRARRFMYVEELLLAGKKEIWSAR 360
FVNIFAYIENLYNLIRPQKVFFMAVDGVAPRAKMNQQRARRFMYVEELLLAGKKEIWSAR
Sbjct: 61 FVNIFAYIENLYNLIRPQKVFFMAVDGVAPRAKMNQQRARRFMYVEELLLAGKKEIWSAR 120
Query: 361 TAHTQLAKALENGEIMPSEARFDSNCITPGTYFMTRLHQKLDDWIKTKSATDSRWQGRKI 540
TAHTQLAKALENGEIMPSEARFDSNCITPGTYFMTRLHQKLDDWIKTKSATDSRWQGRKI
Sbjct: 121 TAHTQLAKALENGEIMPSEARFDSNCITPGTYFMTRLHQKLDDWIKTKSATDSRWQGRKI 180
Query: 541 ILSGHNVPGEG 573
ILSGHN G
Sbjct: 181 ILSGHNQKKSG 191
>gi|39591343|emb|CAE73396.1| Hypothetical protein CBG20837
[Caenorhabditis briggsae]
Length = 1183
Score = 1781 bits (4613), Expect = 0.0
Identities = 880/1214 (72%), Positives = 1000/1214 (81%), Gaps = 5/1214 (0%)
Frame = +1
Query: 1 MGVPKFYRWTSERYPCLSEVINESQIPEFDNLYLDMNGIIHNCSHPNDDDVTFRITEDEI 180
MGVPKFYRWTSERYPCLSEVINESQIPEFDNLYLDMNGIIHNCSHPNDDDVTFRITE+EI
Sbjct: 1 MGVPKFYRWTSERYPCLSEVINESQIPEFDNLYLDMNGIIHNCSHPNDDDVTFRITEEEI 60
Query: 181 FVNIFAYIENLYNLIRPQKVFFMAVDGVAPRAKMNQQRARRFMYVEELLLAGKKEIWSAR 360
FVNIFAYIENLYNLI+PQKVFFMAVDGVAPRAKMNQQRARRFM SAR
Sbjct: 61 FVNIFAYIENLYNLIKPQKVFFMAVDGVAPRAKMNQQRARRFM--------------SAR 106
Query: 361 TAHTQLAKALENGEIMPSEARFDSNCITPGTYFMTRLHQKLDDWIKTKSATDSRWQGRKI 540
TA TQ+ +A+ GE++PSE RFDSNCITPGTYFMTRLH+KLD W++ KS +D+RWQGRKI
Sbjct: 107 TAQTQMDQAIAKGEVLPSEKRFDSNCITPGTYFMTRLHEKLDAWVREKSVSDTRWQGRKI 166
Query: 541 ILSGHNVPGEGEHKIMDFIRTERAGSSYDPNTRHCMYGLDADLIMLGIVSHEPHFSLLRE 720
ILSGHNVPGEGEHKIMDFIR+ERAG+ YDPNTRHCMYGLDADLIMLGIVSHEPHFSLLRE
Sbjct: 167 ILSGHNVPGEGEHKIMDFIRSERAGTGYDPNTRHCMYGLDADLIMLGIVSHEPHFSLLRE 226
Query: 721 EVTFNTRPRKNDNKATKKPKRTDSDVKKFXXXXXXXXREYLAWEFADVKDSLPFEYEMER 900
EVTFNTRPRKND K KKPKRTDS+VK F REYLAWEFADVK+SLPFEY+MER
Sbjct: 227 EVTFNTRPRKNDQK--KKPKRTDSEVKTFHLLHLSLLREYLAWEFADVKESLPFEYDMER 284
Query: 901 IVDDWILLGLLVGNDFLPHLPNIHIHDDALPLLYSTYKKVLPTLDGYINEAGYLNLSRFE 1080
IVDDWI++GLLVGNDFLPHLP+IHIHDDALPLLYSTYKKVLP+LD YINE+GYLNL+RFE
Sbjct: 285 IVDDWIMMGLLVGNDFLPHLPSIHIHDDALPLLYSTYKKVLPSLD-YINESGYLNLARFE 343
Query: 1081 AFLAELALNDKTSFMERLEDEQFMESKRI-RVVDPEQQELAEPELVAFESSDVXXXXXXX 1257
FLA+L+LNDK FM++LED+QFMESK++ R E++E ELVAFESSD+
Sbjct: 344 KFLAQLSLNDKNCFMDKLEDDQFMESKKLPRNGSGEEEE----ELVAFESSDIEDEEADG 399
Query: 1258 XXXXXXXXXXXXXXXXXXXFVSDHEEDGDDLEPGSGSDELLLSNLDAQLLEDEFNDELAT 1437
FVSDHEED ++ + ++E + DAQ LE+EFNDELAT
Sbjct: 400 EKEDSSRNNDDHDAA----FVSDHEEDKNNGTGKTSAEES--PDYDAQFLEEEFNDELAT 453
Query: 1438 LALSGMNDADFANDVEACWTKTINNQFKRHKKTYYSDKLRYKNISKQQLREQAEGYVRAI 1617
LALSGM+DADFAN+VEACWTK I+NQFKRHKK YYSDKLRYKNISK +LR QAEGYVRAI
Sbjct: 454 LALSGMDDADFANNVEACWTKAIDNQFKRHKKYYYSDKLRYKNISKAELRAQAEGYVRAI 513
Query: 1618 QWNLHYYYHGCVSWSWFYPHHYAPFISDVRGFVGMRMEFELSEPFHPFEQLLAVLPEASA 1797
QWNLHYYYHGCVSWSWFYPHHYAPFISDV+GF M++EFELS+PF PFEQLLAVLPEAS
Sbjct: 514 QWNLHYYYHGCVSWSWFYPHHYAPFISDVQGFADMKIEFELSKPFQPFEQLLAVLPEASR 573
Query: 1798 DCLPRPLRELMSSDPAKSPICDFYPANFETDLNGKRNEWEAVVLIPFIEEKRLLEAIEAK 1977
DCLPRPL+ELMSSDPA+S I DFYP+ FETDLNGK+N+WEAVVLIPFIEEKRLLEAIE+K
Sbjct: 574 DCLPRPLQELMSSDPAQSAIHDFYPSKFETDLNGKKNDWEAVVLIPFIEEKRLLEAIESK 633
Query: 1978 RSRLTSEENARNSHGSHIQCISSPEPPNSQGQWRTVRSEIPQDSFRIPRSQVKWGLLPNV 2157
++RL+ EE RN+HG HIQ IS+ + G+W+ R E+ Q+ FRIP+ QVKWGLLPNV
Sbjct: 634 QNRLSQEEKMRNTHGCHIQVISTRQ---GGGEWKMDRQELSQEIFRIPKEQVKWGLLPNV 690
Query: 2158 KMDVYFPGFPTMKHLSHLGELRFANCNIFGMASRKESMVLKVENERAHTDIIELGSELCD 2337
KMDVYFPGFPTMKHLSH G+L FANCNIFGMASRKESMVLKVENE++ DIIE GSELCD
Sbjct: 691 KMDVYFPGFPTMKHLSHSGKLSFANCNIFGMASRKESMVLKVENEKSDKDIIEWGSELCD 750
Query: 2338 EEVCIDWPILKVAKIDSIWGGDDKIVRKC--DDEIIVKDMSEEEKRQWQAHANQLTEHLM 2511
EEVCIDWPILK+AK+DSIWGGDDKIVRK DD+IIVKDM+EEEK+QWQ+H NQLTE +M
Sbjct: 751 EEVCIDWPILKLAKVDSIWGGDDKIVRKVEGDDDIIVKDMTEEEKKQWQSHVNQLTERMM 810
Query: 2512 TRFAIEIAAQKDSKGKHIRPAVAWVRKFTGLVYEA-QGGGKEPSVLKACKQWSSPQQXXX 2688
TR+AIEIA QKD KGKHIRPA+AWVRKFTGLVYE +G E LKA KQWS P
Sbjct: 811 TRYAIEIAGQKDGKGKHIRPALAWVRKFTGLVYETNEGSDSEGPTLKAVKQWSGPTSLYP 870
Query: 2689 XXXXXXXXXXXXENSRVLADLPMKQAYPKQSIVWITDPKFALFGMPGMVNGFSNEKSADC 2868
ENSR LADLP+ AYP QS+VWI DPK +LFGMPGMVNG+ ++ + C
Sbjct: 871 VLLPLVVKDVLLENSRFLADLPVSLAYPLQSVVWILDPKASLFGMPGMVNGYRDQDKSQC 930
Query: 2869 RIEVIGMSTQNKVDKMEALRKKMEQKSLRWMGGYDCARQCQVDTRLFARITGTMFLWNEP 3048
+EVIGM+ N+VD ME LRK ++ +LRWMGGYDCARQCQ+D RLFARITGTM LWNEP
Sbjct: 931 CLEVIGMTDDNRVDIMENLRKDSDRFTLRWMGGYDCARQCQIDVRLFARITGTMMLWNEP 990
Query: 3049 RERVEKGQQISSSDSKINCGLALKYSRRDLCVADYTDRTEHTNQRGVTNKVWFYTNLATR 3228
RE VE GQQI SSDSKINCGL+LKYSRRD+C+AD+TDR E N RGVT+KVWFYT L
Sbjct: 991 RESVETGQQI-SSDSKINCGLSLKYSRRDICLADFTDRIETVNARGVTSKVWFYTPLTCA 1049
Query: 3229 LVSEYRRKFPDVWKYLETIGLTQQDDVYYTEDIWSNEKTREKRFGELSEFLGGLPSLEAE 3408
LV+EY+++FP++ KY E++G++Q DDVYYTEDIW NEK R+ +F EL EFL LPS +AE
Sbjct: 1050 LVTEYKKRFPELIKYFESVGMSQTDDVYYTEDIWKNEKQRDAKFAELKEFLSNLPSHDAE 1109
Query: 3409 QLKCGTVYADRQLITEIEMILAE-PDEKKPVMNKYMMAPGALFRYELYNGKVHADPAADF 3585
QLKCGT YADRQ+I+EIE + + P +KK M +Y + P +FR+ELY+GKV DP ADF
Sbjct: 1110 QLKCGTEYADRQIISEIERRIHQLPPKKKRAMTRYFVPPSMVFRFELYDGKVQMDPEADF 1169
Query: 3586 QILDRVALMSSDTV 3627
ILDRVA MS DTV
Sbjct: 1170 LILDRVASMSPDTV 1183
>gi|24474444|gb|AAN11306.1| DNA strand-exchange protein SEP1 [Homo
sapiens]
Length = 1706
Score = 732 bits (1890), Expect = 0.0
Identities = 461/1236 (37%), Positives = 648/1236 (52%), Gaps = 35/1236 (2%)
Frame = +1
Query: 1 MGVPKFYRWTSERYPCLSEVINESQIPEFDNLYLDMNGIIHNCSHPNDDDVTFRITEDEI 180
MGVPKFYRW SERYPCLSEV+ E QIPEFDNLYLDMNGIIH CSHPNDDDV FRI++D+I
Sbjct: 1 MGVPKFYRWISERYPCLSEVVKEHQIPEFDNLYLDMNGIIHQCSHPNDDDVHFRISDDKI 60
Query: 181 FVNIFAYIENLYNLIRPQKVFFMAVDGVAPRAKMNQQRARRFMYVEELLLAGKKEIWSAR 360
F +IF Y+E L+ +I+P+KVFFMAVDGVAPRAKMNQQR RRF SA+
Sbjct: 61 FTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFR--------------SAK 106
Query: 361 TAHTQLAKALENGEIMPSEARFDSNCITPGTYFMTRLHQKLDDWIKTKSATDSRWQGRKI 540
A ++ KA+E GE +P+EARFDSNCITPGT FM RLH+ L ++ K +TD WQG I
Sbjct: 107 EAEDKIKKAIEKGETLPTEARFDSNCITPGTEFMARLHEHLKYFVNMKISTDKSWQGVTI 166
Query: 541 ILSGHNVPGEGEHKIMDFIRTERAGSSYDPNTRHCMYGLDADLIMLGIVSHEPHFSLLRE 720
SGH PGEGEHKIM+FIR+E+A +DPNTRHC+YGLDADLIMLG+ SHE HFSLLRE
Sbjct: 167 YFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLIMLGLTSHEAHFSLLRE 226
Query: 721 EVTFNTRPRKNDNKATKKPKRTDSDVKKFXXXXXXXXREYLAWEFADVKDSLPFEYEMER 900
EV F + K + + F REY+ +EF+ +K+ + F+Y++ER
Sbjct: 227 EVRFGGK---------KTQRVCAPEETTFHLLHLSLMREYIDYEFSVLKEKITFKYDIER 277
Query: 901 IVDDWILLGLLVGNDFLPHLPNIHIHDDALPLLYSTYKKVLPTLDGYINEAGYLNLSRFE 1080
I+DDWIL+G LVGNDF+PHLP++HI+ DALPLLY TY +LP L GYINE+G+LNL RFE
Sbjct: 278 IIDDWILMGFLVGNDFIPHLPHLHINHDALPLLYGTYVTILPELGGYINESGHLNLPRFE 337
Query: 1081 AFLAELALNDKTSFMERLEDEQFMESKRIRVVDPEQQELAEPELVAFESSDVXXXXXXXX 1260
+L +L+ D+ F E D ++ ESK E +A E ++
Sbjct: 338 KYLVKLSDFDREHFSEVFVDLKWFESKVGNKYLNEAAGVAAEEARNYKEKKKLKGQENSL 397
Query: 1261 XXXXXXXXXXXXXXXXXXFVSDHEEDGDDLEPGSGSDELLLSNLDAQLLEDEFNDELATL 1440
D ++ E + D L D L E EF T
Sbjct: 398 CWTAL--------------------DKNEGEMITSKDNLEDETEDDDLFETEFRQYKRTY 437
Query: 1441 ALSGMN----DADFANDVEACWTKTINNQFKRHKKTYYSDKLRYKNISKQQLREQAEGYV 1608
++ M DF D AC+ V
Sbjct: 438 YMTKMGVDVVSDDFLADQAACY-------------------------------------V 460
Query: 1609 RAIQWNLHYYYHGCVSWSWFYPHHYAPFISDVRGFVGMRMEFELSEPFHPFEQLLAVLPE 1788
+AIQW LHYYYHG SWSW+YP+HYAPF+SD+ +++ FEL +PF PFEQLLAVLP
Sbjct: 461 QAIQWILHYYYHGVQSWSWYYPYHYAPFLSDIHNISTLKIHFELGKPFKPFEQLLAVLPA 520
Query: 1789 ASADCLPRPLRELMSSDPAKSPICDFYPANFETDLNGKRNEWEAVVLIPFIEEKRLLEAI 1968
AS + LP + LM+++ SPI ++YP +F+TDLNGK+ EWEAVVLIPFI+EKRLLEA+
Sbjct: 521 ASKNLLPACYQHLMTNE--DSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAM 578
Query: 1969 EAKRSRLTSEENARNSHGSHIQC---------ISSPEPPNSQGQWR--TVRSEIPQDSFR 2115
E L EE RN H + C SP P R T I D++R
Sbjct: 579 ETCNHSLKKEERKRNQHSECLMCWYDRDTEFIYPSPWPEKFPAIERCCTRYKIISLDAWR 638
Query: 2116 IPRSQVKWGLLPNVKMDVYFPGFPTMKHLSHLGELRFANCNIFGMASRKESMVLK--VEN 2289
+ ++ K + + +YF GFPT+KH+ H L+ + +F +SR E+M+L+ V+
Sbjct: 639 VDINKNKITRID--QKALYFCGFPTLKHIRHKFFLKKSGVQVFQQSSRGENMMLEILVDA 696
Query: 2290 ERAHTDIIELGSELCDEEVCIDWPILKVAKIDSIWGGDDKIV-------------RKCDD 2430
E + + S + + V ++WP L+ A++ ++ G+ K R
Sbjct: 697 ESDELTVENVASSVLGKSVFVNWPHLEEARVVAVSDGETKFYLEEPPGTQKLYSGRTAPP 756
Query: 2431 EIIVKDMSEEEKRQWQAHANQLTEHLMTRFAIEIAAQKDSKGKHIRPAVAWVRKFTGLVY 2610
+V + ++E+ W ++EH + R I I + AV + + TG Y
Sbjct: 757 SKVV-HLGDKEQSNWAKEVQGISEHYLRRKGIII---------NETSAVVYAQLLTGRKY 806
Query: 2611 EAQGGGKEPSVLKACKQWSS---PQQXXXXXXXXXXXXXXXENSRVLADLPMKQAYPKQS 2781
+ G+ ++ KQWS P N + L DL +P +S
Sbjct: 807 QINQNGE----VRLEKQWSKQVVPFVYQTIVKDIRAFDSRFSNIKTLDDL-----FPLRS 857
Query: 2782 IVWITDPKFALFGMPGMVNGFSNEKSADCRIEVIGMSTQNKVDKMEALRKKMEQKSLRWM 2961
+V++ + +G G V S + + RI VI ++AL + + S+++
Sbjct: 858 MVFMLGTPY--YGCTGEVQD-SGDVITEGRIRVIFSIPCE--PNLDALIQNQHKYSIKYN 912
Query: 2962 GGYDCARQCQVDTRLFARITGTMFLWNEPRERVEKGQQISSSDSKINCGLALKYSRRDLC 3141
GY A + V L +R TG++F+ R D K N GL LK+++++
Sbjct: 913 PGYVLASRLGVSGYLVSRFTGSIFIGRGSRRN-------PHGDHKANVGLNLKFNKKNEE 965
Query: 3142 VADYTDRTEHTNQRGVTNKVWFYTNLATRLVSEYRRKFPDVWKYLETIGLTQQDDVYYTE 3321
V YT + W Y++ A +L++EY + P+++ Y I Q+DV+Y +
Sbjct: 966 VPGYTKK---------VGSEWMYSSAAEQLLAEYLERAPELFSY---IAKNSQEDVFYED 1013
Query: 3322 DIWSNE-KTREKRFGELSEFLGGLPSLEAEQLKCGTVYADRQLITEIEMILAEPDEKKPV 3498
DIW E + ++ E+ +L G P + C D ++ +IE + + ++K
Sbjct: 1014 DIWPGENENGAEKVQEIITWLKGHPVSTLSRSSCDLQILDAAIVEKIEEEVEKCKQRKNN 1073
Query: 3499 MN-KYMMAPGALFRYELYNGKVHADPAADFQILDRV 3603
+ + P L+R V D A+F + DRV
Sbjct: 1074 KKVRVTVKPHLLYRPLEQQHGVIPDRDAEFCLFDRV 1109
>gi|40254887|ref|NP_061874.2| 5'-3' exoribonuclease 1; strand-exchange
protein 1 [Homo sapiens]
gi|34365218|emb|CAE45950.1| hypothetical protein [Homo sapiens]
Length = 1706
Score = 729 bits (1881), Expect = 0.0
Identities = 459/1236 (37%), Positives = 647/1236 (52%), Gaps = 35/1236 (2%)
Frame = +1
Query: 1 MGVPKFYRWTSERYPCLSEVINESQIPEFDNLYLDMNGIIHNCSHPNDDDVTFRITEDEI 180
MGVPKFYRW SERYPCLSEV+ E QIPEFDNLYLDMNGIIH CSHPN DDV FRI++D+I
Sbjct: 1 MGVPKFYRWISERYPCLSEVVKEHQIPEFDNLYLDMNGIIHQCSHPNGDDVHFRISDDKI 60
Query: 181 FVNIFAYIENLYNLIRPQKVFFMAVDGVAPRAKMNQQRARRFMYVEELLLAGKKEIWSAR 360
F +IF Y+E L+ +I+P+KVFFMAVDGVAPRAKMNQQR RRF SA+
Sbjct: 61 FTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFR--------------SAK 106
Query: 361 TAHTQLAKALENGEIMPSEARFDSNCITPGTYFMTRLHQKLDDWIKTKSATDSRWQGRKI 540
A ++ KA+E GE +P+EARFDSNCITPGT FM RLH+ L ++ K +TD WQG I
Sbjct: 107 EAEDKIKKAIEKGETLPTEARFDSNCITPGTEFMARLHEHLKYFVNMKISTDKSWQGVTI 166
Query: 541 ILSGHNVPGEGEHKIMDFIRTERAGSSYDPNTRHCMYGLDADLIMLGIVSHEPHFSLLRE 720
SGH PGEGEHKIM+FIR+E+A +DPNTRHC+YGLDADLIMLG+ SHE HFSLLRE
Sbjct: 167 YFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLIMLGLTSHEAHFSLLRE 226
Query: 721 EVTFNTRPRKNDNKATKKPKRTDSDVKKFXXXXXXXXREYLAWEFADVKDSLPFEYEMER 900
EV F + K + + F REY+ +EF+ +K+ + F+Y++ER
Sbjct: 227 EVRFGGK---------KTQRVCAPEETTFHLLHLSLMREYIDYEFSVLKEKITFKYDIER 277
Query: 901 IVDDWILLGLLVGNDFLPHLPNIHIHDDALPLLYSTYKKVLPTLDGYINEAGYLNLSRFE 1080
I+DDWIL+G LVGNDF+PHLP++HI+ DALPLLY TY +LP L GYINE+G+LNL RFE
Sbjct: 278 IIDDWILMGFLVGNDFIPHLPHLHINHDALPLLYGTYVTILPELGGYINESGHLNLPRFE 337
Query: 1081 AFLAELALNDKTSFMERLEDEQFMESKRIRVVDPEQQELAEPELVAFESSDVXXXXXXXX 1260
+L +L+ D+ F E D ++ ESK E +A E ++
Sbjct: 338 KYLVKLSDFDREHFSEVFVDLKWFESKVGNKYLNEAAGVAAEEARNYKEKKKLKGQENSL 397
Query: 1261 XXXXXXXXXXXXXXXXXXFVSDHEEDGDDLEPGSGSDELLLSNLDAQLLEDEFNDELATL 1440
D ++ E + D L D L E EF T
Sbjct: 398 CWTAL--------------------DKNEGEMITSKDNLEDETEDDDLFETEFRQYKRTY 437
Query: 1441 ALSGMN----DADFANDVEACWTKTINNQFKRHKKTYYSDKLRYKNISKQQLREQAEGYV 1608
++ M DF D AC+ V
Sbjct: 438 YMTKMGVDVVSDDFLADQAACY-------------------------------------V 460
Query: 1609 RAIQWNLHYYYHGCVSWSWFYPHHYAPFISDVRGFVGMRMEFELSEPFHPFEQLLAVLPE 1788
+AIQW LHYYYHG SWSW+YP+HYAPF+SD+ +++ FEL +PF PFEQLLAVLP
Sbjct: 461 QAIQWILHYYYHGVQSWSWYYPYHYAPFLSDIHNISTLKIHFELGKPFKPFEQLLAVLPA 520
Query: 1789 ASADCLPRPLRELMSSDPAKSPICDFYPANFETDLNGKRNEWEAVVLIPFIEEKRLLEAI 1968
AS + LP + LM+++ SPI ++YP +F+TDLNGK+ EWEAVVLIPFI+EKRLLEA+
Sbjct: 521 ASKNLLPACYQHLMTNE--DSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAM 578
Query: 1969 EAKRSRLTSEENARNSHGSHIQC---------ISSPEPPNSQGQWR--TVRSEIPQDSFR 2115
E L EE RN H + C SP P R T I D++R
Sbjct: 579 ETCNHSLKKEERKRNQHSECLMCWYDRDTEFIYPSPWPEKFPAIERCCTRYKIISLDAWR 638
Query: 2116 IPRSQVKWGLLPNVKMDVYFPGFPTMKHLSHLGELRFANCNIFGMASRKESMVLK--VEN 2289
+ ++ K + + +YF GFPT+KH+ H L+ + +F +SR E+M+L+ V+
Sbjct: 639 VDINKNKITRID--QKALYFCGFPTLKHIRHKFFLKKSGVQVFQQSSRGENMMLEILVDA 696
Query: 2290 ERAHTDIIELGSELCDEEVCIDWPILKVAKIDSIWGGDDKIV-------------RKCDD 2430
E + + S + + V ++WP ++ A++ ++ G+ K R
Sbjct: 697 ESDELTVENVASSVLGKSVFVNWPHIEEARVVAVSDGETKFYLEEPPGTQKLYSGRTAPP 756
Query: 2431 EIIVKDMSEEEKRQWQAHANQLTEHLMTRFAIEIAAQKDSKGKHIRPAVAWVRKFTGLVY 2610
+V + ++E+ W ++EH + R I I + AV + + TG Y
Sbjct: 757 SKVV-HLGDKEQSNWAKEVQGISEHYLRRKGIII---------NETSAVVYAQLLTGRKY 806
Query: 2611 EAQGGGKEPSVLKACKQWSS---PQQXXXXXXXXXXXXXXXENSRVLADLPMKQAYPKQS 2781
+ G+ ++ KQWS P N + L DL +P +S
Sbjct: 807 QINQNGE----VRLEKQWSKQVVPFVYQTIVKDIRAFDSRFSNIKTLDDL-----FPLRS 857
Query: 2782 IVWITDPKFALFGMPGMVNGFSNEKSADCRIEVIGMSTQNKVDKMEALRKKMEQKSLRWM 2961
+V++ + +G G V S + + RI VI ++AL + + S+++
Sbjct: 858 MVFMLGTPY--YGCTGEVQD-SGDVITEGRIRVIFSIPCE--PNLDALIQNQHKYSIKYN 912
Query: 2962 GGYDCARQCQVDTRLFARITGTMFLWNEPRERVEKGQQISSSDSKINCGLALKYSRRDLC 3141
GY A + V L +R TG++F+ R D K N GL LK+++++
Sbjct: 913 PGYVLASRLGVSGYLVSRFTGSIFIGRGSRRN-------PHGDHKANVGLNLKFNKKNEE 965
Query: 3142 VADYTDRTEHTNQRGVTNKVWFYTNLATRLVSEYRRKFPDVWKYLETIGLTQQDDVYYTE 3321
V YT + W Y++ A +L++EY + P+++ Y I Q+DV+Y +
Sbjct: 966 VPGYTKK---------VGSEWMYSSAAEQLLAEYLERAPELFSY---IAKNSQEDVFYED 1013
Query: 3322 DIWSNE-KTREKRFGELSEFLGGLPSLEAEQLKCGTVYADRQLITEIEMILAEPDEKKPV 3498
DIW E + ++ E+ +L G P + C D ++ +IE + + ++K
Sbjct: 1014 DIWPGENENGAEKVQEIITWLKGHPVSTLSRSSCDLQILDAAIVEKIEEEVEKCKQRKNN 1073
Query: 3499 MN-KYMMAPGALFRYELYNGKVHADPAADFQILDRV 3603
+ + P L+R V D A+F + DRV
Sbjct: 1074 KKVRVTVKPHLLYRPLEQQHGVIPDRDAEFCLFDRV 1109
>gi|6756025|ref|NP_036046.1| 5'-3' exoribonuclease 1 [Mus musculus]
gi|7513771|pir||T30244 phosphodiesterase I (EC 3.1.4.1) - mouse
gi|2281015|dbj|BAA21563.1| Dhm2 protein [Mus musculus]
Length = 1687
Score = 686 bits (1771), Expect = 0.0
Identities = 450/1235 (36%), Positives = 642/1235 (51%), Gaps = 34/1235 (2%)
Frame = +1
Query: 1 MGVPKFYRWTSERYPCLSEVINESQIPEFDNLYLDMNGIIHNCSHPNDDDVTFRITEDEI 180
MGVPKFYRW SERYPCLSEV+ E QIPEFDNLYLDMNGIIH CSHPNDDDV FRI++D+I
Sbjct: 1 MGVPKFYRWISERYPCLSEVVKEHQIPEFDNLYLDMNGIIHQCSHPNDDDVHFRISDDKI 60
Query: 181 FVNIFAYIENLYNLIRPQKVFFMAVDGVAPRAKMNQQRARRFMYVEELLLAGKKEIWSAR 360
F +IF Y+E L+ +I+P+KVFFMAVDGVAPRAKMNQQRARRF SA+
Sbjct: 61 FTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRARRFR--------------SAK 106
Query: 361 TAHTQLAKALENGEIMPSEARFDSNCITPGTYFMTRLHQKLDDWIKTKSATDSRWQGRKI 540
A ++ KA+E GE +P+EARFDSNCITPGT FM RLH+ L ++ K +TD WQG I
Sbjct: 107 EAEDKIKKAIEKGETLPTEARFDSNCITPGTEFMARLHEHLKYFVNMKISTDKSWQGVTI 166
Query: 541 ILSGHNVPGEGEHKIMDFIRTERAGSSYDPNTRHCMYGLDADLIMLGIVSHEPHFSLLRE 720
SGH PGEGEHKIM+FIR+E+A +DPNTRHC+YGLDADLIMLG+ SHE HFSLLRE
Sbjct: 167 YFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLIMLGLTSHEAHFSLLRE 226
Query: 721 EVTFNTRPRKNDNKATKKPKRTDSDVKKFXXXXXXXXREYLAWEFADVKDSLPFEYEMER 900
EV F + K + + F REY+ +EF+ +K+ + F+Y++E+
Sbjct: 227 EVRFGGK---------KTQRVCAPEETTFHLLHLSLMREYIDYEFSALKEKITFKYDIEK 277
Query: 901 IVDDWILLGLLVGNDFLPHLPNIHIHDDALPLLYSTYKKVLPTLDGYINEAGYLNLSRFE 1080
I+DDWIL+G LVGNDF+PHLP++HI+ DALPLLY TY +LP L GYINE+G+LNL RFE
Sbjct: 278 IIDDWILMGFLVGNDFIPHLPHLHINHDALPLLYGTYIAILPELGGYINESGHLNLPRFE 337
Query: 1081 AFLAELALNDKTSFMERLEDEQFMESKRIRVVDPEQQELAEPELVAFESSDVXXXXXXXX 1260
+L +L+ D+ F E D ++ ESK V + E A A E+ +
Sbjct: 338 RYLVKLSDFDREHFSEVFVDLKWFESK---VGNKYLNEAA--GAAAEEAKNCKEKRKPKG 392
Query: 1261 XXXXXXXXXXXXXXXXXXFVSDHEEDGDDLEPGSGSDELLLSNLDAQLLEDEFNDELATL 1440
D+ ED + D L E EF T
Sbjct: 393 QENSLSWAALDKSEGEGVASRDNFEDETE---------------DDDLFETEFRQYKRTY 437
Query: 1441 ALSGMN----DADFANDVEACWTKTINNQFKRHKKTYYSDKLRYKNISKQQLREQAEGYV 1608
++ M +F + AC+ + I Q+ H YY Y
Sbjct: 438 YMTKMGVDVVSDEFLANQAACYVQAI--QWILH---YY--------------------YH 472
Query: 1609 RAIQWNLHYYYHGCVSWSWFYPHHYAPFISDVRGFVGMRMEFELSEPFHPFEQLLAVLPE 1788
W+ +Y Y HYAPF+SD+R +++ FEL +PF PFEQLLAVLP
Sbjct: 473 GVQSWSWYYPY------------HYAPFLSDIRSISTLKIHFELGKPFKPFEQLLAVLPS 520
Query: 1789 ASADCLPRPLRELMSSDPAKSPICDFYPANFETDLNGKRNEWEAVVLIPFIEEKRLLEAI 1968
AS + LP + LM+S+ SPI ++YP +F+TDLNGK+ EWEAVVLIPFI+E RLLEA+
Sbjct: 521 ASKNLLPTCYQHLMTSE--DSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDETRLLEAM 578
Query: 1969 EAKRSRLTSEENARNSHGSHIQC---------ISSPEPPNSQGQWR--TVRSEIPQDSFR 2115
E L EE RN H + C SSP P R T I D++R
Sbjct: 579 ETCNHSLKKEERKRNQHSECLMCWYDRDTEFTYSSPWPEKFPAIERCCTRYKMISLDAWR 638
Query: 2116 IPRSQVKWGLLPNVKMDVYFPGFPTMKHLSHLGELRFANCNIFGMASRKESMVLK--VEN 2289
+ ++ K + + +YF GFPT+KH+ H L+ + +F +SR E+++L+ V
Sbjct: 639 VDINKNK--ITRVDQKALYFCGFPTLKHIKHKFFLKKSGVQVFQQSSRGENLMLEISVNA 696
Query: 2290 ERAHTDIIELGSELCDEEVCIDWPILKVAKIDSIWGGDDKI------------VRKCDDE 2433
E I + S + + V ++WP L+ A++ ++ G+ K + K
Sbjct: 697 EPDELRIENIASAVLGKAVFVNWPHLEEARVVAVSDGETKFYIEEPPGTQKVYLGKTAPP 756
Query: 2434 IIVKDMSEEEKRQWQAHANQLTEHLMTRFAIEIAAQKDSKGKHIRPAVAWVRKFTGLVYE 2613
V ++++E+ W ++E + R I I + AV + + TG Y+
Sbjct: 757 SKVIQLTDKEQSNWTKEIQGISEQYLRRKGIII---------NETSAVVYAQLLTGRKYQ 807
Query: 2614 AQGGGKEPSVLKACKQWSS---PQQXXXXXXXXXXXXXXXENSRVLADLPMKQAYPKQSI 2784
G+ ++ KQWS P N + L DL +P +++
Sbjct: 808 ISQNGE----VRLEKQWSKQILPFVYQTIVKDIRAFDSRFSNIKTLDDL-----FPPRTM 858
Query: 2785 VWITDPKFALFGMPGMVNGFSNEKSADCRIEVIGMSTQNKVDKMEALRKKMEQKSLRWMG 2964
V++ + +G G V S + + RI V+ ++AL + + S+++
Sbjct: 859 VFMLGTPY--YGCTGEVQD-SGDLITEGRIRVVFSIPCE--PNLDALIQNQHKYSIKYNP 913
Query: 2965 GYDCARQCQVDTRLFARITGTMFLWNEPRERVEKGQQISSSDSKINCGLALKYSRRDLCV 3144
GY A + V L +R TG++F+ R D K N GL LK+++++ V
Sbjct: 914 GYVLAGRLGVSGYLVSRFTGSIFIGRGSRRN-------PHGDHKANVGLNLKFNKKNEEV 966
Query: 3145 ADYTDRTEHTNQRGVTNKVWFYTNLATRLVSEYRRKFPDVWKYLETIGLTQQDDVYYTED 3324
YT + W Y++ A +L++EY + P+++ Y I Q+DV+Y +D
Sbjct: 967 PGYTKK---------VGNEWMYSSAAEQLLAEYIERAPELFSY---IAKNSQEDVFYEDD 1014
Query: 3325 IWSNE-KTREKRFGELSEFLGGLPSLEAEQLKCGTVYADRQLITEIEMILAEPDEKKPVM 3501
IW E + ++ E+ +L G P + C D ++ +IE + + ++K
Sbjct: 1015 IWPGENENGAEKVQEIITWLKGHPVSTLSRSSCDLHILDAAIVEKIEEEVEKCKQRKSNK 1074
Query: 3502 N-KYMMAPGALFRYELYNGKVHADPAADFQILDRV 3603
+ + P L+R V D A+F++ DRV
Sbjct: 1075 KVRVTVKPHLLYRPLEQQHGVIPDRDAEFRLFDRV 1109
>gi|7513645|pir||T30174 exoribonuclease, variant 1 - mouse
gi|1894791|emb|CAA62819.1| 5'-3' exonuclease [Mus musculus]
Length = 1719
Score = 684 bits (1765), Expect = 0.0
Identities = 448/1235 (36%), Positives = 641/1235 (51%), Gaps = 34/1235 (2%)
Frame = +1
Query: 1 MGVPKFYRWTSERYPCLSEVINESQIPEFDNLYLDMNGIIHNCSHPNDDDVTFRITEDEI 180
MGVPKFYRW SERYPCLSEV+ E QIPEFDNLYLDMNGIIH CSHPNDDDV FRI++D+I
Sbjct: 1 MGVPKFYRWISERYPCLSEVVKEHQIPEFDNLYLDMNGIIHQCSHPNDDDVHFRISDDKI 60
Query: 181 FVNIFAYIENLYNLIRPQKVFFMAVDGVAPRAKMNQQRARRFMYVEELLLAGKKEIWSAR 360
F +IF Y+E L+ +I+P+KVFFMAVDGVAPRAKMNQQR RRF SA+
Sbjct: 61 FTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFR--------------SAK 106
Query: 361 TAHTQLAKALENGEIMPSEARFDSNCITPGTYFMTRLHQKLDDWIKTKSATDSRWQGRKI 540
A ++ KA+E GE +P+EARFDSNCITPGT FM RLH+ L ++ K +TD WQG I
Sbjct: 107 EAEDKIKKAIEKGETLPTEARFDSNCITPGTEFMARLHEHLKYFVNMKISTDKSWQGVTI 166
Query: 541 ILSGHNVPGEGEHKIMDFIRTERAGSSYDPNTRHCMYGLDADLIMLGIVSHEPHFSLLRE 720
SGH PGEGEHKIM+FIR+E+A +DPNTRHC+YGLDADLIMLG+ SHE HFSLLRE
Sbjct: 167 YFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLIMLGLTSHEAHFSLLRE 226
Query: 721 EVTFNTRPRKNDNKATKKPKRTDSDVKKFXXXXXXXXREYLAWEFADVKDSLPFEYEMER 900
EV F + K + + F REY+ +EF+ +K+ + F+Y++E+
Sbjct: 227 EVRFGGK---------KTQRVCAPEETTFHLLHLSLMREYIDYEFSALKEKITFKYDIEK 277
Query: 901 IVDDWILLGLLVGNDFLPHLPNIHIHDDALPLLYSTYKKVLPTLDGYINEAGYLNLSRFE 1080
I+DDWIL+G LVGNDF+PHLP++HI+ DALPLLY TY +LP L GYINE+G+LNL RFE
Sbjct: 278 IIDDWILMGFLVGNDFIPHLPHLHINHDALPLLYGTYIAILPELGGYINESGHLNLPRFE 337
Query: 1081 AFLAELALNDKTSFMERLEDEQFMESKRIRVVDPEQQELAEPELVAFESSDVXXXXXXXX 1260
+L +L+ D+ F E D ++ ESK V + E A A E+ +
Sbjct: 338 RYLVKLSDFDREHFSEVFVDLKWFESK---VGNKYLNEAA--GAAAEEAKNCKEKRKPKG 392
Query: 1261 XXXXXXXXXXXXXXXXXXFVSDHEEDGDDLEPGSGSDELLLSNLDAQLLEDEFNDELATL 1440
D+ ED + D L E EF T
Sbjct: 393 QENSLSWAALDKSEGEGVASRDNFEDETE---------------DDDLFETEFRQYKRTY 437
Query: 1441 ALSGMN----DADFANDVEACWTKTINNQFKRHKKTYYSDKLRYKNISKQQLREQAEGYV 1608
++ M +F + AC+ + I Q+ H YY Y
Sbjct: 438 YMTKMGVDVVSDEFLANQAACYVQAI--QWILH---YY--------------------YH 472
Query: 1609 RAIQWNLHYYYHGCVSWSWFYPHHYAPFISDVRGFVGMRMEFELSEPFHPFEQLLAVLPE 1788
W+ +Y Y HYAPF+SD+R +++ FEL +PF PFEQLLAVLP
Sbjct: 473 GVQSWSWYYPY------------HYAPFLSDIRSISTLKIHFELGKPFKPFEQLLAVLPS 520
Query: 1789 ASADCLPRPLRELMSSDPAKSPICDFYPANFETDLNGKRNEWEAVVLIPFIEEKRLLEAI 1968
AS + LP + LM+S+ SPI ++YP +F+TDLNGK+ EWEAVVLIPFI+E RLLEA+
Sbjct: 521 ASKNLLPTCYQHLMTSE--DSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDETRLLEAM 578
Query: 1969 EAKRSRLTSEENARNSHGSHIQC---------ISSPEPPNSQGQWR--TVRSEIPQDSFR 2115
E L EE RN H + C SSP P R T I D++R
Sbjct: 579 ETCNHSLKKEERKRNQHSECLMCWYDRDTEFTYSSPWPEKFPAIERCCTRYKMISLDAWR 638
Query: 2116 IPRSQVKWGLLPNVKMDVYFPGFPTMKHLSHLGELRFANCNIFGMASRKESMVLK--VEN 2289
+ ++ K + + +YF GFPT+KH+ H L+ + +F +SR E+++L+ V
Sbjct: 639 VDINKNK--ITRVDQKALYFCGFPTLKHIKHKFFLKKSGVQVFQQSSRGENLMLEISVNA 696
Query: 2290 ERAHTDIIELGSELCDEEVCIDWPILKVAKIDSIWGGDDKI------------VRKCDDE 2433
E I + S + + V ++WP L+ A++ ++ G+ K + K
Sbjct: 697 EPDELRIENIASAVLGKAVFVNWPHLEEARVVAVSDGETKFYIEEPPGTQKVYLGKTAPP 756
Query: 2434 IIVKDMSEEEKRQWQAHANQLTEHLMTRFAIEIAAQKDSKGKHIRPAVAWVRKFTGLVYE 2613
V ++++E+ W ++E + R I I + AV + + TG Y+
Sbjct: 757 SKVIQLTDKEQSNWTKEIQGISEQYLRRKGIII---------NETSAVVYAQLLTGRKYQ 807
Query: 2614 AQGGGKEPSVLKACKQWSS---PQQXXXXXXXXXXXXXXXENSRVLADLPMKQAYPKQSI 2784
G+ ++ KQWS P N + L DL +P +++
Sbjct: 808 ISQNGE----VRLEKQWSKQILPFVYQTIVKDIRAFDSRFSNIKTLDDL-----FPPRTM 858
Query: 2785 VWITDPKFALFGMPGMVNGFSNEKSADCRIEVIGMSTQNKVDKMEALRKKMEQKSLRWMG 2964
V++ + +G G V S + + RI V+ ++AL + + S+++
Sbjct: 859 VFMLGTPY--YGCTGEVQD-SGDLITEGRIRVVFSIPCE--PNLDALIQNQHKYSIKYNP 913
Query: 2965 GYDCARQCQVDTRLFARITGTMFLWNEPRERVEKGQQISSSDSKINCGLALKYSRRDLCV 3144
GY A + V L +R TG++F+ R D K N GL LK+++++ V
Sbjct: 914 GYVLAGRLGVSGYLVSRFTGSIFIGRGSRRN-------PHGDHKANVGLNLKFNKKNEEV 966
Query: 3145 ADYTDRTEHTNQRGVTNKVWFYTNLATRLVSEYRRKFPDVWKYLETIGLTQQDDVYYTED 3324
YT + W Y++ A +L++EY + P+++ Y I Q+DV+Y +D
Sbjct: 967 PGYTKK---------VGNEWMYSSAAEQLLAEYIERAPELFSY---IAKNSQEDVFYEDD 1014
Query: 3325 IWSNE-KTREKRFGELSEFLGGLPSLEAEQLKCGTVYADRQLITEIEMILAEPDEKKPVM 3501
IW E + ++ E+ +L G P + C D ++ +IE + + ++K
Sbjct: 1015 IWPGENENGAEKVQEIITWLKGHPVSTLSRSSCDLHILDAAIVEKIEEEVEKCKQRKSNK 1074
Query: 3502 N-KYMMAPGALFRYELYNGKVHADPAADFQILDRV 3603
+ + P ++R V D A+F++ DRV
Sbjct: 1075 KVRVTVKPHLMYRPLEQQHGVIPDRDAEFRLFDRV 1109
>gi|7513646|pir||T30175 exoribonuclease, variant 2 - mouse
gi|1894792|emb|CAA62820.1| 5'-3' exonuclease [Mus musculus]
Length = 1706
Score = 684 bits (1765), Expect = 0.0
Identities = 448/1235 (36%), Positives = 641/1235 (51%), Gaps = 34/1235 (2%)
Frame = +1
Query: 1 MGVPKFYRWTSERYPCLSEVINESQIPEFDNLYLDMNGIIHNCSHPNDDDVTFRITEDEI 180
MGVPKFYRW SERYPCLSEV+ E QIPEFDNLYLDMNGIIH CSHPNDDDV FRI++D+I
Sbjct: 1 MGVPKFYRWISERYPCLSEVVKEHQIPEFDNLYLDMNGIIHQCSHPNDDDVHFRISDDKI 60
Query: 181 FVNIFAYIENLYNLIRPQKVFFMAVDGVAPRAKMNQQRARRFMYVEELLLAGKKEIWSAR 360
F +IF Y+E L+ +I+P+KVFFMAVDGVAPRAKMNQQR RRF SA+
Sbjct: 61 FTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFR--------------SAK 106
Query: 361 TAHTQLAKALENGEIMPSEARFDSNCITPGTYFMTRLHQKLDDWIKTKSATDSRWQGRKI 540
A ++ KA+E GE +P+EARFDSNCITPGT FM RLH+ L ++ K +TD WQG I
Sbjct: 107 EAEDKIKKAIEKGETLPTEARFDSNCITPGTEFMARLHEHLKYFVNMKISTDKSWQGVTI 166
Query: 541 ILSGHNVPGEGEHKIMDFIRTERAGSSYDPNTRHCMYGLDADLIMLGIVSHEPHFSLLRE 720
SGH PGEGEHKIM+FIR+E+A +DPNTRHC+YGLDADLIMLG+ SHE HFSLLRE
Sbjct: 167 YFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLIMLGLTSHEAHFSLLRE 226
Query: 721 EVTFNTRPRKNDNKATKKPKRTDSDVKKFXXXXXXXXREYLAWEFADVKDSLPFEYEMER 900
EV F + K + + F REY+ +EF+ +K+ + F+Y++E+
Sbjct: 227 EVRFGGK---------KTQRVCAPEETTFHLLHLSLMREYIDYEFSALKEKITFKYDIEK 277
Query: 901 IVDDWILLGLLVGNDFLPHLPNIHIHDDALPLLYSTYKKVLPTLDGYINEAGYLNLSRFE 1080
I+DDWIL+G LVGNDF+PHLP++HI+ DALPLLY TY +LP L GYINE+G+LNL RFE
Sbjct: 278 IIDDWILMGFLVGNDFIPHLPHLHINHDALPLLYGTYIAILPELGGYINESGHLNLPRFE 337
Query: 1081 AFLAELALNDKTSFMERLEDEQFMESKRIRVVDPEQQELAEPELVAFESSDVXXXXXXXX 1260
+L +L+ D+ F E D ++ ESK V + E A A E+ +
Sbjct: 338 RYLVKLSDFDREHFSEVFVDLKWFESK---VGNKYLNEAA--GAAAEEAKNCKEKRKPKG 392
Query: 1261 XXXXXXXXXXXXXXXXXXFVSDHEEDGDDLEPGSGSDELLLSNLDAQLLEDEFNDELATL 1440
D+ ED + D L E EF T
Sbjct: 393 QENSLSWAALDKSEGEGVASRDNFEDETE---------------DDDLFETEFRQYKRTY 437
Query: 1441 ALSGMN----DADFANDVEACWTKTINNQFKRHKKTYYSDKLRYKNISKQQLREQAEGYV 1608
++ M +F + AC+ + I Q+ H YY Y
Sbjct: 438 YMTKMGVDVVSDEFLANQAACYVQAI--QWILH---YY--------------------YH 472
Query: 1609 RAIQWNLHYYYHGCVSWSWFYPHHYAPFISDVRGFVGMRMEFELSEPFHPFEQLLAVLPE 1788
W+ +Y Y HYAPF+SD+R +++ FEL +PF PFEQLLAVLP
Sbjct: 473 GVQSWSWYYPY------------HYAPFLSDIRSISTLKIHFELGKPFKPFEQLLAVLPS 520
Query: 1789 ASADCLPRPLRELMSSDPAKSPICDFYPANFETDLNGKRNEWEAVVLIPFIEEKRLLEAI 1968
AS + LP + LM+S+ SPI ++YP +F+TDLNGK+ EWEAVVLIPFI+E RLLEA+
Sbjct: 521 ASKNLLPTCYQHLMTSE--DSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDETRLLEAM 578
Query: 1969 EAKRSRLTSEENARNSHGSHIQC---------ISSPEPPNSQGQWR--TVRSEIPQDSFR 2115
E L EE RN H + C SSP P R T I D++R
Sbjct: 579 ETCNHSLKKEERKRNQHSECLMCWYDRDTEFTYSSPWPEKFPAIERCCTRYKMISLDAWR 638
Query: 2116 IPRSQVKWGLLPNVKMDVYFPGFPTMKHLSHLGELRFANCNIFGMASRKESMVLK--VEN 2289
+ ++ K + + +YF GFPT+KH+ H L+ + +F +SR E+++L+ V
Sbjct: 639 VDINKNK--ITRVDQKALYFCGFPTLKHIKHKFFLKKSGVQVFQQSSRGENLMLEISVNA 696
Query: 2290 ERAHTDIIELGSELCDEEVCIDWPILKVAKIDSIWGGDDKI------------VRKCDDE 2433
E I + S + + V ++WP L+ A++ ++ G+ K + K
Sbjct: 697 EPDELRIENIASAVLGKAVFVNWPHLEEARVVAVSDGETKFYIEEPPGTQKVYLGKTAPP 756
Query: 2434 IIVKDMSEEEKRQWQAHANQLTEHLMTRFAIEIAAQKDSKGKHIRPAVAWVRKFTGLVYE 2613
V ++++E+ W ++E + R I I + AV + + TG Y+
Sbjct: 757 SKVIQLTDKEQSNWTKEIQGISEQYLRRKGIII---------NETSAVVYAQLLTGRKYQ 807
Query: 2614 AQGGGKEPSVLKACKQWSS---PQQXXXXXXXXXXXXXXXENSRVLADLPMKQAYPKQSI 2784
G+ ++ KQWS P N + L DL +P +++
Sbjct: 808 ISQNGE----VRLEKQWSKQILPFVYQTIVKDIRAFDSRFSNIKTLDDL-----FPPRTM 858
Query: 2785 VWITDPKFALFGMPGMVNGFSNEKSADCRIEVIGMSTQNKVDKMEALRKKMEQKSLRWMG 2964
V++ + +G G V S + + RI V+ ++AL + + S+++
Sbjct: 859 VFMLGTPY--YGCTGEVQD-SGDLITEGRIRVVFSIPCE--PNLDALIQNQHKYSIKYNP 913
Query: 2965 GYDCARQCQVDTRLFARITGTMFLWNEPRERVEKGQQISSSDSKINCGLALKYSRRDLCV 3144
GY A + V L +R TG++F+ R D K N GL LK+++++ V
Sbjct: 914 GYVLAGRLGVSGYLVSRFTGSIFIGRGSRRN-------PHGDHKANVGLNLKFNKKNEEV 966
Query: 3145 ADYTDRTEHTNQRGVTNKVWFYTNLATRLVSEYRRKFPDVWKYLETIGLTQQDDVYYTED 3324
YT + W Y++ A +L++EY + P+++ Y I Q+DV+Y +D
Sbjct: 967 PGYTKK---------VGNEWMYSSAAEQLLAEYIERAPELFSY---IAKNSQEDVFYEDD 1014
Query: 3325 IWSNE-KTREKRFGELSEFLGGLPSLEAEQLKCGTVYADRQLITEIEMILAEPDEKKPVM 3501
IW E + ++ E+ +L G P + C D ++ +IE + + ++K
Sbjct: 1015 IWPGENENGAEKVQEIITWLKGHPVSTLSRSSCDLHILDAAIVEKIEEEVEKCKQRKSNK 1074
Query: 3502 N-KYMMAPGALFRYELYNGKVHADPAADFQILDRV 3603
+ + P ++R V D A+F++ DRV
Sbjct: 1075 KVRVTVKPHLMYRPLEQQHGVIPDRDAEFRLFDRV 1109
>gi|31209497|ref|XP_313715.1| ENSANGP00000003801 [Anopheles gambiae]
gi|30176809|gb|EAA09254.2| ENSANGP00000003801 [Anopheles gambiae str.
PEST]
Length = 1108
Score = 677 bits (1748), Expect = 0.0
Identities = 438/1221 (35%), Positives = 620/1221 (49%), Gaps = 17/1221 (1%)
Frame = +1
Query: 1 MGVPKFYRWTSERYPCLSEVINESQIPEFDNLYLDMNGIIHNCSHPNDDDVTFRITEDEI 180
MGVPKF+R+ SERYPCLSE++ E+Q+PEFDNLYLDMNGIIHNCSHPND DV FRI+E+ I
Sbjct: 1 MGVPKFFRYMSERYPCLSELLRENQVPEFDNLYLDMNGIIHNCSHPNDADVHFRISEEMI 60
Query: 181 FVNIFAYIENLYNLIRPQKVFFMAVDGVAPRAKMNQQRARRFMYVEELLLAGKKEIWSAR 360
F IF Y+E L+ LIRPQ+VFF+AVDGVAPRAKMNQQR RRF SA
Sbjct: 61 FEGIFHYVEYLFKLIRPQQVFFIAVDGVAPRAKMNQQRGRRFR--------------SAA 106
Query: 361 TAHTQLAKALENGEIMPSEARFDSNCITPGTYFMTRLHQKLDDWIKTKSATDSRWQGRKI 540
A L KA GE + SE+ FDSNCITPGT FM RL L +I+ K ATD W+ +
Sbjct: 107 EAQDLLEKAKAKGEEISSESPFDSNCITPGTSFMVRLQNALQHFIQVKIATDRLWKACTV 166
Query: 541 ILSGHNVPGEGEHKIMDFIRTERAGSSYDPNTRHCMYGLDADLIMLGIVSHEPHFSLLRE 720
ILSGH PGEGEHKIM++IR +A ++PNTRHC+YGLDADLIMLG+ +HE +FSLLRE
Sbjct: 167 ILSGHETPGEGEHKIMEYIRHAKAQPGFNPNTRHCLYGLDADLIMLGLCTHERYFSLLRE 226
Query: 721 EVTFNTRPRKNDNKATKKPKRTDSDVKKFXXXXXXXXREYLAWEFADVKDSLPFEYEMER 900
EV F KND K + + +F EYL EFA V+D L F +++ +
Sbjct: 227 EVKFG----KNDKKTSNLKE------IRFYLLHLTLLSEYLELEFASVRDRLRFPFDIHK 276
Query: 901 IVDDWILLGLLVGNDFLPHLPNIHIHDDALPLLYSTYKKVLPTLDGYINEAGYLNLSRFE 1080
++DDWILL LVGNDF+PH+P++HI+++ALP LY Y VLP +DGYINEAG LNL R +
Sbjct: 277 LIDDWILLVYLVGNDFIPHMPHLHINENALPTLYEAYMDVLPNMDGYINEAGILNLPRLQ 336
Query: 1081 AFLAELALNDKTSFMERLEDEQFMESKRIRVVDPEQQELAEPELVAFESSDVXXXXXXXX 1260
+ LA D+ F++R D +++E K V +
Sbjct: 337 MLMRRLANFDRDMFLDRYTDLKYLEGK------------CGKNNVCVSRTGPFSIWMLLT 384
Query: 1261 XXXXXXXXXXXXXXXXXXFVSD--HEEDGDDLEPGSGSDELLLSNLDAQLLEDEFNDELA 1434
S+ E D+ P + D + N D +L E EF +
Sbjct: 385 STRIIGASEMDKDLMALIMSSEMLDSEGEDNAAPVTLGD---IEN-DPELFEQEFKNYKR 440
Query: 1435 TLALSGMNDADFANDVEACWTKTINNQFKRHKKTYYSDKLRYKNISKQQLREQAEGYVRA 1614
+S M ADF +V A EQAE Y+RA
Sbjct: 441 NYYMSKMGYADFTEEVRA---------------------------------EQAECYIRA 467
Query: 1615 IQWNLHYYYHGCVSWSWFYPHHYAPFISDVRGFVGMRMEFELSEPFHPFEQLLAVLPEAS 1794
+QW LHYYY G VSWSW+YPHHYAPFISDV F +++++EL+ PF PF+QLL+VLP AS
Sbjct: 468 LQWTLHYYYRGVVSWSWYYPHHYAPFISDVDNFAHLKLDYELARPFLPFQQLLSVLPAAS 527
Query: 1795 ADCLPRPLRELMSSDPAKSPICDFYPANFETDLNGKRNEWEAVVLIPFIEEKRLLEAIEA 1974
LP +LM +DP S + DFYP NF TDLNGK+ WEAVVLIPFI+EKRLL+A+
Sbjct: 528 KQHLPSAYHQLM-TDP-NSSVYDFYPVNFATDLNGKQQAWEAVVLIPFIDEKRLLKAMGP 585
Query: 1975 KRSRLTSEENARNSHGSHI--QCISSPEPP-------NSQGQWRTVRSEIPQDSFRIPRS 2127
+ LT EE RN HG + Q + P + + SEI +D R+ +
Sbjct: 586 CDAFLTDEEKQRNVHGPMLKYQYDTKQHAPLEAKYGFDRVDELHVKCSEIWRDDLRVAEN 645
Query: 2128 QVKWGLLPNVKMDVYFPGFPTMKHLSHLGELRFANCNIFGMASRKESMVLKVEN-ERAHT 2304
++ G + Y GFPT HL + GEL+ IF AS+ ESMV+ ++ + +
Sbjct: 646 RLVLGPSQGAVLHGYAKGFPTFAHLPYHGELKELRVKIFNFASKNESMVVVLDTPDGQPS 705
Query: 2305 DIIELGSELCDEEVCIDWPILKVAKIDSIWGGDDKIVRKCDDEIIVKDMSE---EEKRQW 2475
D EL EL + V + WP L A +VR D + SE ++R +
Sbjct: 706 DTAELAKELLGKVVHVSWPHLMEA----------IVVRVSDRSKTYERNSEPLPTDERSF 755
Query: 2476 QAHANQLTEHLMTRFAIEIAAQKDSKGKHIRPAVAWVRKFTGLVYEAQGGGKEPSVLKAC 2655
+ EH R AI + K I +V K G V +
Sbjct: 756 NMWCRSIIEHNNNRLAINVGTIKQLVHVRIAVGTEYVLKDNGFVLK-------------- 801
Query: 2656 KQWSSPQQXXXXXXXXXXXXXXXENSRVLADLPMKQAYPKQSIVWITDPKFALFGMPGMV 2835
K W++ + + M++ +P++S+V++ +F M +V
Sbjct: 802 KLWNTIDTAYPAQTIIQDLQDIMAKQKPY--IEMEEMFPRESVVFLRATEF-YGSMGNVV 858
Query: 2836 NGFSNEKSADCRIEVIGMSTQNKVDKMEALRKKMEQKSLRWMGGYDCARQCQVDTRLFAR 3015
+ + K R V +V + Q + D A + L +
Sbjct: 859 DVSGSTKRVQARFLVYEEPDLGQVYNVH------RQSLQGYRNANDTAAMLGISVGLLLQ 912
Query: 3016 ITGTMFLWNEPRERVEKGQQISSSDSK-INCGLALKYSRRDLCVADYTDRTEHTNQRGVT 3192
+TG++ + G + + D K +N GL L+ +D Y +
Sbjct: 913 LTGSILV-------APGGHRALNVDEKSLNIGLRLRMISKDEEAVGYCRK---------V 956
Query: 3193 NKVWFYTNLATRLVSEYRRKFPDVWKYLETIGLTQQDDVYYTEDIWSNEKTREKRFGELS 3372
NK W +++ +L+ +Y + P ++ E + +++ +V++ D++ + E + EL
Sbjct: 957 NKTWLFSDKTVKLMQQYMERAPGLF---EKLDCSRKTNVHFETDLFG--EGNEGKLQELY 1011
Query: 3373 EFLGGLPSLEAEQLKCGTVYADRQLITEI-EMILAEPDEKKPVMNKYMMAPGALFRYELY 3549
++L + +E+ CG + + + I + E I +P + + P L+R +
Sbjct: 1012 DWLKVQEHVNSERRSCGIILLEEKAIEALAETIDKYQTLHQPKVQTMFVDPKELYRPGMK 1071
Query: 3550 NGKVHADPAADFQILDRVALM 3612
N K+ DP+A F++LDR+ ++
Sbjct: 1072 NAKM-IDPSAHFELLDRIIVV 1091
>gi|34865790|ref|XP_217233.2| similar to 5-3 exonuclease [Rattus
norvegicus]
Length = 1787
Score = 676 bits (1745), Expect = 0.0
Identities = 456/1283 (35%), Positives = 642/1283 (49%), Gaps = 82/1283 (6%)
Frame = +1
Query: 1 MGVPKFYRWTSERYPCLSEVINESQ----------------------------------- 75
MGVPKFYRW SERYPCLSEV+ E Q
Sbjct: 1 MGVPKFYRWISERYPCLSEVVKEHQVGELRPWRKKWARGPLRCGTPAFQLPVVLVSGRKG 60
Query: 76 ------------IPEFDNLYLDMNGIIHNCSHPNDDDVTFRITEDEIFVNIFAYIENLYN 219
IPEFDNLYLDMNGIIH CSHPNDDDV FRI++D+IF +IF Y+E L+
Sbjct: 61 GREGRPRVGGLQIPEFDNLYLDMNGIIHQCSHPNDDDVHFRISDDKIFTDIFHYLEVLFR 120
Query: 220 LIRPQKVFFMAVDGVAPRAKMNQQRARRFMYVEELLLAGKKEIWSARTAHTQLAKALENG 399
+I+P+KVFFMAVDGVAPRAKMNQQR RRF SA+ A ++ KA+E G
Sbjct: 121 IIKPRKVFFMAVDGVAPRAKMNQQRGRRFR--------------SAKEAEDKIKKAIEKG 166
Query: 400 EIMPSEARFDSNCITPGTYFMTRLHQKLDDWIKTKSATDSRWQGRKIILSGHNVPGEGEH 579
E +P+EARFDSNCITPGT FM RLH+ L ++ K +TD WQG I SGH PGEGEH
Sbjct: 167 ETLPTEARFDSNCITPGTEFMARLHEHLKYFVNMKISTDKSWQGVTIYFSGHETPGEGEH 226
Query: 580 KIMDFIRTERAGSSYDPNTRHCMYGLDADLIMLGIVSHEPHFSLLREEVTFNTRPRKNDN 759
KIM+FIR+E+A +DPNTRHC+YGLDADLIMLG+ SHE HFSLLREEV F +
Sbjct: 227 KIMEFIRSEKAKPDHDPNTRHCLYGLDADLIMLGLTSHEAHFSLLREEVRFGGK------ 280
Query: 760 KATKKPKRTDSDVKKFXXXXXXXXREYLAWEFADVKDSLPFEYEMERIVDDWILLGLLVG 939
K + + F REY+ +EF+ +K+ + F+Y++E+I+DDWIL+G LVG
Sbjct: 281 ---KTQRVCAPEETTFHLLHLSLMREYIDYEFSALKEKITFKYDIEKIIDDWILMGFLVG 337
Query: 940 NDFLPHLPNIHIHDDALPLLYSTYKKVLPTLDGYINEAGYLNLSRFEAFLAELALNDKTS 1119
NDF+PHLP++HI+ DALPLLY TY +LP L GYINE+G+LNL RFE +L +L+ D+
Sbjct: 338 NDFIPHLPHLHINHDALPLLYGTYIAILPELGGYINESGHLNLPRFERYLVKLSDFDREH 397
Query: 1120 FMERLEDEQFMESKRIRVVDPEQQELAEPELVAFESSDVXXXXXXXXXXXXXXXXXXXXX 1299
F E D ++ ESK E A E A D
Sbjct: 398 FSEVFVDLKWFESKVGNKYLNEAAGAAAEE--AKSCKDKRKGQENSLSWAALDKREGEGV 455
Query: 1300 XXXXXFVSDHEEDGDDLEPGSGSDELLLSNLDAQLLEDEFNDELATLALSGMN----DAD 1467
F + E+D L E EF T ++ M +
Sbjct: 456 ASRDNFEDETEDD--------------------DLFETEFRQYKRTYYMTKMGVDVVSDE 495
Query: 1468 FANDVEACWTKTINNQFKRHKKTYYSDKLRYKNISKQQLREQAEGYVRAIQWNLHYYYHG 1647
F D AC+ + I Q+ H YY Y W+ +Y
Sbjct: 496 FLADQAACYVQAI--QWILH---YY--------------------YHGVQSWSWYY---- 526
Query: 1648 CVSWSWFYPHHYAPFISDVRGFVGMRMEFELSEPFHPFEQLLAVLPEASADCLPRPLREL 1827
P+HYAPF+SD+R +++ FEL +PF PFEQLLAVLP AS LP + L
Sbjct: 527 --------PYHYAPFLSDIRNISTLKIHFELGKPFKPFEQLLAVLPSASKTLLPTCYQHL 578
Query: 1828 MSSDPAKSPICDFYPANFETDLNGKRNEWEAVVLIPFIEEKRLLEAIEAKRSRLTSEENA 2007
M+S+ SPI ++YP +F+TDLNGK+ EWEAVVLIPFI+EKRLLEA+E L EE
Sbjct: 579 MTSE--DSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEERK 636
Query: 2008 RNSHGSHIQC---------ISSPEPPNSQGQWR--TVRSEIPQDSFRIPRSQVKWGLLPN 2154
RN H + C SSP P R T I D++R+ ++ K +
Sbjct: 637 RNQHSECLMCWYDSDTEFTYSSPWPEKFPAIERCSTRYKIISLDAWRVDINKNK--ITRV 694
Query: 2155 VKMDVYFPGFPTMKHLSHLGELRFANCNIFGMASRKESMVLK--VENERAHTDIIELGSE 2328
+ +YF GFPT+KH+ H L+ + +F +SR E+M+L+ V E I + S
Sbjct: 695 DQKALYFCGFPTLKHIKHKFFLKKSGVQVFQQSSRGENMMLEITVNAEPDELSIENIASS 754
Query: 2329 LCDEEVCIDWPILKVAKIDSIWGGDDKI------------VRKCDDEIIVKDMSEEEKRQ 2472
+ + V ++WP L+ A++ ++ G+ K + K V +S++E+
Sbjct: 755 VLGKSVFVNWPHLEEARVVAVSDGETKFYMEEPPGTQKVYLGKTAPPCKVIQLSDKEQSN 814
Query: 2473 WQAHANQLTEHLMTRFAIEIAAQKDSKGKHIRPAVAWVRKFTGLVYEAQGGGKEPSVLKA 2652
W ++E + R I I + AV + + TG Y+ G+ ++
Sbjct: 815 WTKEIQGISEQYLRRKGIMI---------NETSAVVYAQLLTGRRYQVNQNGE----VRL 861
Query: 2653 CKQWSS---PQQXXXXXXXXXXXXXXXENSRVLADLPMKQAYPKQSIVWITDPKFALFGM 2823
KQWS P N + L DL +P +S+V++ + +G
Sbjct: 862 EKQWSKQSLPFVYQTIVKDVRAFDSRFSNIKTLDDL-----FPPRSVVFMLGTPY--YGC 914
Query: 2824 PGMVNGFSNEKSADCRIEVIGMSTQNKVDKMEALRKKMEQKSLRWMGGYDCARQCQVDTR 3003
G V S + + RI V+ ++AL + + S+++ GY A + V
Sbjct: 915 TGEVQD-SGDVITEGRIRVVFSIPCE--PNLDALIQNQHKYSIKYNPGYVLAGRLGVSGY 971
Query: 3004 LFARITGTMFLWNEPRERVEKGQQISSSDSKINCGLALKYSRRDLCVADYTDRTEHTNQR 3183
L +R TG++F+ R D K N GL LK+++++ V YT R
Sbjct: 972 LVSRFTGSIFIGRGSRRN-------PHGDHKANVGLNLKFNKKNEEVPGYTKR------- 1017
Query: 3184 GVTNKVWFYTNLATRLVSEYRRKFPDVWKYLETIGLTQQDDVYYTEDIWSNE-KTREKRF 3360
W Y++ A +L++EY + P+++ Y I Q+DV+Y +DIW E ++ ++
Sbjct: 1018 --VGSEWMYSSAAEQLLAEYIERAPELFSY---IAQNSQEDVFYEDDIWPGESESGAEKV 1072
Query: 3361 GELSEFLGGLPSLEAEQLKCGTVYADRQLITEIEMILAEPDEKKPVMN-KYMMAPGALFR 3537
E+ +L G P + C D ++ +IE + + ++K + + P LFR
Sbjct: 1073 QEIITWLKGHPVSTLSRSSCDLHILDAAIVEKIEEEVEKCKQRKNNKKVRVTVKPHLLFR 1132
Query: 3538 -YELYNGKVHADPAADFQILDRV 3603
E +G + D A+F++ DRV
Sbjct: 1133 PLEQQHGAI-PDRDAEFRLFDRV 1154
>gi|47216611|emb|CAG10909.1| unnamed protein product [Tetraodon
nigroviridis]
Length = 1574
Score = 674 bits (1740), Expect = 0.0
Identities = 414/1109 (37%), Positives = 594/1109 (53%), Gaps = 28/1109 (2%)
Frame = +1
Query: 1 MGVPKFYRWTSERYPCLSEVINESQIPEFDNLYLDMNGIIHNCSHPNDDDVTFRITEDEI 180
MGVPKFYRW SERYPCLSE++ E QIPEFDNLYLDMNGIIH CSHPND+DV FRI+E++I
Sbjct: 1 MGVPKFYRWISERYPCLSEIVKEHQIPEFDNLYLDMNGIIHQCSHPNDEDVHFRISEEKI 60
Query: 181 FVNIFAYIENLYNLIRPQKVFFMAVDGVAPRAKMNQQRARRFMYVEELLLAGKKEIWSAR 360
F +IF Y+E L+ +I+P+KVFFMAVDGVAPRAKMNQQR RRF SA+
Sbjct: 61 FADIFHYVEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFR--------------SAK 106
Query: 361 TAHTQLAKALENGEIMPSEARFDSNCITPGTYFMTRLHQKLDDWIKTKSATDSRWQGRKI 540
A ++ KAL+ GE++P+EARFDSNCITPGT FM RL ++L+ ++ +K +TD WQ ++
Sbjct: 107 EAEEKIKKALDKGEVLPTEARFDSNCITPGTDFMARLQEQLEYFVHSKLSTDKLWQNVRV 166
Query: 541 ILSGHNVPGEGEHKIMDFIRTERAGSSYDPNTRHCMYGLDADLIMLGIVSHEPHFSLLRE 720
LSGH PGEGEHKIM+FIR+E G +DPNTRHC+YGLDADLIMLG+ SHEP+FSLLRE
Sbjct: 167 YLSGHETPGEGEHKIMEFIRSENNGPGHDPNTRHCLYGLDADLIMLGLTSHEPNFSLLRE 226
Query: 721 EVTFNTRPRKNDNKATKKPKRTDSDVKKFXXXXXXXXREYLAWEFADVKDSLPFEYEMER 900
EV F K K P+ T F REY+ +EF+ +++ L Y++ER
Sbjct: 227 EVRFG---GKKSQKRITAPEET-----TFHLLHLSLMREYIDYEFSVLRNHLGSTYDLER 278
Query: 901 IVDDWILLGLLVGNDFLPHLPNIHIHDDALPLLYSTYKKVLPTLDGYINEAGYLNLSRFE 1080
I+DDWIL+G L+GNDF+PHLP++HI DALPLLY TY VLP+L GY+NE G LNL FE
Sbjct: 279 IIDDWILMGFLIGNDFIPHLPHLHISHDALPLLYKTYISVLPSLGGYLNENGNLNLKNFE 338
Query: 1081 AFLAELALNDKTSFMERLEDEQFMESKRIRVVDPEQQELAEPELVAFESSDVXXXXXXXX 1260
+L +L+ D+ F E D ++ ESK E LA + A +++D
Sbjct: 339 KYLEKLSEFDREHFSEVFVDLKWFESKVGNKYLNEAAGLAAEKEAASKAADQQEAAPGLT 398
Query: 1261 XXXXXXXXXXXXXXXXXXFVSDHEEDGDDLEPGSGSDELLLSNLDAQLLEDEFNDELATL 1440
E+ GD+ E + L E EF
Sbjct: 399 AA---------------------EKPGDEEEE------------EEDLFETEF------- 418
Query: 1441 ALSGMNDADFANDVEACWTKTINNQFKRHKKTYYSDKLRYKNISKQQLREQAEGYVRAIQ 1620
Q+KR TYY K+ +S L QA YV IQ
Sbjct: 419 -----------------------RQYKR---TYYMTKMGVDVVSDDFLALQARCYVEGIQ 452
Query: 1621 WNLHYYYHGCVSWSWFYPHHYAPFISDVRGFVGMRMEFELSEPFHPFEQLLAVLPEASAD 1800
W LHYYYHG SWSW+YP+HYAPF+SD++ +++ F+L +PF PF+QLLAVLP AS +
Sbjct: 453 WILHYYYHGVQSWSWYYPYHYAPFLSDIKNVAELKLTFDLEKPFMPFQQLLAVLPAASME 512
Query: 1801 CLPRPLRELMSSDPAKSPICDFYPANFETDLNGKRNEWEAVVLIPFIEEKRLLEAIEAKR 1980
LP R LM+S+ SPI ++YP +F+TDLNGK+ EWEAVVLIPFI+E R
Sbjct: 513 LLPEAYRHLMTSE--NSPIIEYYPHDFKTDLNGKQQEWEAVVLIPFIDEVRTHTHTHTHT 570
Query: 1981 S---------RLTSEENAR--NSHGSHIQCISSPEPPNSQGQWRTVRSEIPQDSFRIPRS 2127
LT AR + H +H S + + + IP D++++P +
Sbjct: 571 HTHTHLTLTLTLTLLACARCGSVHTTHTMSPSGSGRSSDATWQQRGKEHIPMDAWQVPLN 630
Query: 2128 QVKWGLLPNVKMDVYFPGFPTMKHLSHLGELRFANCNIFGMASRKESMVLKV-ENERAHT 2304
V+ + + +YF GFPT++H+ H + +F +SR E+ +L + + A T
Sbjct: 631 HVRRAI---DRSALYFCGFPTLQHIKHKFYRKKIGVVVFQQSSRGENTILDILPSNEADT 687
Query: 2305 DIIELGSELCDEEVCIDWPILKVAKIDSIWGGDDKIVRKCDDE----------------I 2436
++ EL V ++WP L+ A+I ++ GD VR C +E
Sbjct: 688 VCDDVALELLGISVFVNWPHLEEARIVAVSDGD---VRFCLEEPPGVQRLYSRASTPPPT 744
Query: 2437 IVKDMSEEEKRQWQAHANQLTEHLMTRFAIEIAAQKDSKGKHIRPAVAWVRKFTGLVYEA 2616
V +S++E+++W +TEH + R I + + + + + TG Y
Sbjct: 745 KVTCLSDKEQKEWLKDVQGITEHFLRRKGIVV---------NETAVLLYGQLLTGQKYVP 795
Query: 2617 QGGGKEPSVLKACKQWSSPQQXXXXXXXXXXXXXXXENSRVLADLPMKQAYPKQSIVWIT 2796
+ G V++ KQW+ +Q S + +++ +P + V++
Sbjct: 796 KANG----VVEVEKQWA--KQVLPFAYQTVVKDIKAIYSSLPCYKSLEELFPPTTTVFMV 849
Query: 2797 DPKFALFGMPGMVNGFSNEKSADCRIEVIGMSTQNKVDKMEALRKKMEQKSLRWMGGYDC 2976
+ +G G V S++ D R+ V+ ++E L + + +++ GY
Sbjct: 850 GNPY--YGAMGEVQD-SSDVIKDGRVRVVFNIPHE--PQLETLIQNQHKYCVKYSPGYVL 904
Query: 2977 ARQCQVDTRLFARITGTMFLWNEPRERVEKGQQISSSDSKINCGLALKYSRRDLCVADYT 3156
A + + + L +R +G++F+ ++ + + N GL LK+++++ V YT
Sbjct: 905 ASRLGISSNLVSRFSGSIFIGRGSKKD-------PCGEHRSNIGLNLKFNKKNEEVPGYT 957
Query: 3157 DRTEHTNQRGVTNKVWFYTNLATRLVSEY 3243
RTE K W Y+ +++EY
Sbjct: 958 KRTE---------KEWLYSAAVEEVLAEY 977