Homology by BLASTX


BLASTX 2.2.4 [Aug-26-2002]
Query= Y39B6A_16
         (1290 letters)

Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
           1,967,186 sequences; 661,712,633 total letters


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|25151559|ref|NP_741666.1| putative protein (48.8 kD) (5T487) ...   825   0.0
gi|39579705|emb|CAE56251.1| Hypothetical protein CBG23892 [Caeno...   249   1e-64
gi|34365962|gb|AAA98022.2| Hypothetical protein F31E8.5 [Caenorh...   102   2e-20
gi|17565638|ref|NP_507770.1| putative secreted or extracellular ...   100   6e-20
gi|25354232|pir||D87971 protein Y43F8A.2 [imported] - Caenorhabd...   100   6e-20
gi|17533599|ref|NP_495393.1| putative cytoplasmic protein (2H94)...    91   6e-17
gi|39590236|emb|CAE65974.1| Hypothetical protein CBG11159 [Caeno...    91   8e-17
gi|39582966|emb|CAE73031.1| Hypothetical protein CBG20400 [Caeno...    88   4e-16
gi|42454124|ref|ZP_00154031.1| hypothetical protein Rick101101 [...    36   2.3
gi|15892978|ref|NP_360692.1| unknown [Rickettsia conorii str. Ma...    36   2.3
gi|34581328|ref|ZP_00142808.1| hypothetical protein [Rickettsia ...    36   2.3
gi|39592771|emb|CAE62385.1| Hypothetical protein CBG06471 [Caeno...    35   2.9
gi|27363891|ref|NP_759419.1| GTP binding protein [Vibrio vulnifi...    34   6.6
gi|41016999|sp|Q7MNE7|ENGA_VIBVY GTP-binding protein engA              34   6.6
gi|37678954|ref|NP_933563.1| predicted GTP-binding protein [Vibr...    34   6.6
gi|28897386|ref|NP_796991.1| GTP-binding protein [Vibrio parahae...    34   6.6
gi|28261781|ref|NP_783294.1| Ycf2 [Atropa belladonna] >gnl|BL_OR...    34   8.6
gi|28261760|ref|NP_783274.1| Ycf2 [Atropa belladonna] >gnl|BL_OR...    34   8.6
gi|11466000|ref|NP_054542.1| Ycf2 [Nicotiana tabacum] >gnl|BL_OR...    34   8.6


>gi|25151559|ref|NP_741666.1| putative protein (48.8 kD) (5T487)
            [Caenorhabditis elegans]
 gi|11359781|pir||T45040 hypothetical protein Y39B6B.n [imported] -
            Caenorhabditis elegans
 gi|15209325|emb|CAC51049.1| Hypothetical protein Y39B6A.31
            [Caenorhabditis elegans]
          Length = 429

 Score =  825 bits (2132), Expect = 0.0
 Identities = 406/429 (94%), Positives = 406/429 (94%)
 Frame = +1

Query: 1    MFGTKKTGGLFLXXXXXXXXTSSSFAQDSSTDDPTTQAAPLNVTTEREMPFPLNSLQGSY 180
            MFGTKKTGGLFL        TSSSFAQDSSTDDPTTQAAPLNVTTEREMPFPLNSLQGSY
Sbjct: 1    MFGTKKTGGLFLVVMVMMMMTSSSFAQDSSTDDPTTQAAPLNVTTEREMPFPLNSLQGSY 60

Query: 181  KLTNMRTADHPPTLATIWDLAGVDFDIVAWPPKECAAVHVYFIDAKFKGAVLHIVEDIVK 360
            KLTNMRTADHPPTLATIWDLAGVDFDIVAWPPKECAAVHVYFIDAKFKGAVLHIVEDIVK
Sbjct: 61   KLTNMRTADHPPTLATIWDLAGVDFDIVAWPPKECAAVHVYFIDAKFKGAVLHIVEDIVK 120

Query: 361  KSPFVKFYPQIGRIDVKPTQDGNVLEGTFNQRHAISFTHLNSSTYSVELANNFVDKINKY 540
            KSPFVKFYPQIGRIDVKPTQDGNVLEGTFNQRHAISFTHLNSSTYSVELANNFVDKINKY
Sbjct: 121  KSPFVKFYPQIGRIDVKPTQDGNVLEGTFNQRHAISFTHLNSSTYSVELANNFVDKINKY 180

Query: 541  NGIKTKQSVQMELSGRLAFVVTNSRFCFAHITRDRQNTFYTSLFDFDSFSKNQNRMAKYL 720
            NGIKTKQSVQMELSGRLAFVVTNSRFCFAHITRDRQNTFYTSLFDFDSFSKNQNRMAKYL
Sbjct: 181  NGIKTKQSVQMELSGRLAFVVTNSRFCFAHITRDRQNTFYTSLFDFDSFSKNQNRMAKYL 240

Query: 721  STFEEPEGVHSLFKPPVNXXXXXXXXXXXXXXXKPPVIQTMSKMRSQLKVCTGYSTRSRN 900
            STFEEPEGVHSLFKPPVN               KPPVIQTMSKMRSQLKVCTGYSTRSRN
Sbjct: 241  STFEEPEGVHSLFKPPVNLDKGLLKSVDLLSVLKPPVIQTMSKMRSQLKVCTGYSTRSRN 300

Query: 901  PLKKAFGLITVDSWKVSEENAQLPKRYSSFYVDIGERCSWIRLWITNIEKFDSYNNSMKL 1080
            PLKKAFGLITVDSWKVSEENAQLPKRYSSFYVDIGERCSWIRLWITNIEKFDSYNNSMKL
Sbjct: 301  PLKKAFGLITVDSWKVSEENAQLPKRYSSFYVDIGERCSWIRLWITNIEKFDSYNNSMKL 360

Query: 1081 DETIDFFFDQQFYVGPDSDKARPLAGHSGQINRLSIRRHWFGDDNKHLDKDVQAVQLSYG 1260
            DETIDFFFDQQFYVGPDSDKARPLAGHSGQINRLSIRRHWFGDDNKHLDKDVQAVQLSYG
Sbjct: 361  DETIDFFFDQQFYVGPDSDKARPLAGHSGQINRLSIRRHWFGDDNKHLDKDVQAVQLSYG 420

Query: 1261 RDQGPALPY 1287
            RDQGPALPY
Sbjct: 421  RDQGPALPY 429




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