Homology by BLASTX


BLASTX 2.2.4 [Aug-26-2002]
Query= Y38F2AL_4
         (1221 letters)

Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
           1,967,186 sequences; 661,712,633 total letters


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|17543168|ref|NP_500189.1| putative protein family member, wit...   679   0.0
gi|47271166|gb|AAF59478.2| Hypothetical protein Y38F2AL.1 [Caeno...   567   e-160
gi|39594191|emb|CAE70301.1| Hypothetical protein CBG16822 [Caeno...   463   e-129
gi|17550608|ref|NP_508863.1| predicted CDS, putative endoplasmic...   144   5e-33
gi|39597996|emb|CAE68688.1| Hypothetical protein CBG14602 [Caeno...   143   9e-33
gi|17562478|ref|NP_505843.1| putative N-myristoylated protein fa...   132   2e-29
gi|17562480|ref|NP_505844.1| putative N-myristoylated protein fa...   132   2e-29
gi|25375065|pir||A89208 protein K10D6.2b [imported] - Caenorhabd...   132   2e-29
gi|17562476|ref|NP_505842.1| putative N-myristoylated protein fa...   132   2e-29
gi|38422266|emb|CAB54276.3| Hypothetical protein K10D6.2c [Caeno...   132   2e-29
gi|7505728|pir||T23580 hypothetical protein K10D6.2a - Caenorhab...   132   2e-29
gi|39591969|emb|CAE75189.1| Hypothetical protein CBG23133 [Caeno...   131   3e-29
gi|17543940|ref|NP_502746.1| putative protein family member, wit...    96   1e-18
gi|39583534|emb|CAE73992.1| Hypothetical protein CBG21625 [Caeno...    96   2e-18
gi|17562890|ref|NP_506087.1| predicted CDS, putative protein fam...    50   1e-04
gi|7495087|pir||T15364 hypothetical protein C01C10.1 - Caenorhab...    50   1e-04
gi|17550016|ref|NP_509257.1| CLaudin-like in Caenorhabditis (29....    50   1e-04
gi|39594102|emb|CAE70212.1| Hypothetical protein CBG16690 [Caeno...    50   1e-04
gi|39592233|emb|CAE75454.1| Hypothetical protein CBG23449 [Caeno...    46   0.002
gi|39594103|emb|CAE70213.1| Hypothetical protein CBG16691 [Caeno...    42   0.038
gi|17568655|ref|NP_510166.1| metridin-like ShK toxin family memb...    40   0.15
gi|31239543|ref|XP_320185.1| ENSANGP00000011153 [Anopheles gambi...    37   0.72
gi|17533069|ref|NP_495476.1| putative endoplasmic reticulum prot...    35   2.7
gi|23480918|gb|EAA17353.1| hypothetical protein [Plasmodium yoel...    35   3.6
gi|16763332|ref|NP_458949.1| subunit R of type I restriction-mod...    35   3.6
gi|16767770|ref|NP_463385.1| endonuclease R [Salmonella typhimur...    35   3.6
gi|15408742|dbj|BAB64145.1| P0443D08.25 [Oryza sativa (japonica ...    34   8.0
gi|16132171|ref|NP_418770.1| host restriction; endonuclease R; e...    34   8.0
gi|41752|emb|CAA29791.1| unnamed protein product [Escherichia coli]    34   8.0


>gi|17543168|ref|NP_500189.1| putative protein family member, with at
            least 5 transmembrane domains (4D91) [Caenorhabditis
            elegans]
          Length = 406

 Score =  679 bits (1752), Expect = 0.0
 Identities = 337/406 (83%), Positives = 337/406 (83%)
 Frame = +1

Query: 1    MVPSLVSPRAQRINGMRVARPLRESARTFKVVEVGLVFTVFITXXXXXXXXXXXXHHVVR 180
            MVPSLVSPRAQRINGMRVARPLRESARTFKVVEVGLVFTVFIT            HHVVR
Sbjct: 1    MVPSLVSPRAQRINGMRVARPLRESARTFKVVEVGLVFTVFITSSSPLKLSFFSLHHVVR 60

Query: 181  NPQNPTPNSSKMIIIEVPPYCLPIFLPNSLFFPFFQPDGXXXXXXXXXXXXXXXXIVRRM 360
            NPQNPTPNSSKMIIIEVPPYCLPIFLPNSLFFPFFQPDG                IVRRM
Sbjct: 61   NPQNPTPNSSKMIIIEVPPYCLPIFLPNSLFFPFFQPDGLLSASLIHLLFSFSLFIVRRM 120

Query: 361  SSGADXXXXXXXXXXXXXXXXXXXXXIAAILTPSWQIVNLREYGSIHEHGLWLDCTRHSR 540
            SSGAD                     IAAILTPSWQIVNLREYGSIHEHGLWLDCTRHSR
Sbjct: 121  SSGADLGRKGSLFLSLLFSFIGAGLSIAAILTPSWQIVNLREYGSIHEHGLWLDCTRHSR 180

Query: 541  DGNHILQRYATVTEPLHCVYKFDYDKYSGTFELEDDNSPVGEVNRHKFYGWHTSTMILLG 720
            DGNHILQRYATVTEPLHCVYKFDYDKYSGTFELEDDNSPVGEVNRHKFYGWHTSTMILLG
Sbjct: 181  DGNHILQRYATVTEPLHCVYKFDYDKYSGTFELEDDNSPVGEVNRHKFYGWHTSTMILLG 240

Query: 721  FALLTTGLSTFIGACACCHSXXXXXXXXXXXXXXXXXXXXEGIFFFYSHRADNRFIKGIV 900
            FALLTTGLSTFIGACACCHS                    EGIFFFYSHRADNRFIKGIV
Sbjct: 241  FALLTTGLSTFIGACACCHSSLALFFTIITLLTTLLSAIAEGIFFFYSHRADNRFIKGIV 300

Query: 901  GTYEQRVGTAFFLQMAAAFCHLISFLIAMLFTYFSFASSKDSDGFSIQRSSRTNVTNIGR 1080
            GTYEQRVGTAFFLQMAAAFCHLISFLIAMLFTYFSFASSKDSDGFSIQRSSRTNVTNIGR
Sbjct: 301  GTYEQRVGTAFFLQMAAAFCHLISFLIAMLFTYFSFASSKDSDGFSIQRSSRTNVTNIGR 360

Query: 1081 PENCRSIEFDAPLMYPPQTPISGFRAASYMDDKPVIAESMPELGHR 1218
            PENCRSIEFDAPLMYPPQTPISGFRAASYMDDKPVIAESMPELGHR
Sbjct: 361  PENCRSIEFDAPLMYPPQTPISGFRAASYMDDKPVIAESMPELGHR 406




[DB home][top]