Homology by BLASTX


BLASTX 2.2.4 [Aug-26-2002]
Query= T19B10_5
         (378 letters)

Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
           1,967,186 sequences; 661,712,633 total letters


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|17564394|ref|NP_505851.1| prion-like Q/N-rich domain protein ...    77   8e-14
gi|17564392|ref|NP_505850.1| prion-like Q/N-rich domain protein ...    47   9e-05
gi|39591974|emb|CAE75194.1| Hypothetical protein CBG23140 [Caeno...    40   0.011


>gi|17564394|ref|NP_505851.1| prion-like Q/N-rich domain protein
           PQN-70, Prion-like Q/N-rich domain protein (13.6 kD)
           (pqn-70) [Caenorhabditis elegans]
 gi|7507943|pir||T24982 hypothetical protein T19B10.4b -
           Caenorhabditis elegans
 gi|3879922|emb|CAA98546.1| C. elegans PQN-70 protein (corresponding
           sequence T19B10.4b) [Caenorhabditis elegans]
          Length = 125

 Score = 77.0 bits (188), Expect = 8e-14
 Identities = 52/125 (41%), Positives = 52/125 (41%)
 Frame = -1

Query: 378 MGSSGMGVDANGKPIKRQPTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRQH 199
           MGSSGMGVDANGKPIKRQPTT                                   NRQH
Sbjct: 1   MGSSGMGVDANGKPIKRQPTTNNNNKKAGNNSNNQKKGNNQNNKNNKNQNGGNRNQNRQH 60

Query: 198 HXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRRNGSGKDTMDHRLTMWDKE 19
           H                                      NRRNGSGKDTMDHRLTMWDKE
Sbjct: 61  HQPPMMQMVPPFGPMGPGGPGGPGFMGPPNGNMNFFNGQNRRNGSGKDTMDHRLTMWDKE 120

Query: 18  LLEIT 4
           LLEIT
Sbjct: 121 LLEIT 125




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