Homology by BLASTX
BLASTX 2.2.4 [Aug-26-2002]
Query= T11F9_14
(1539 letters)
Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
1,967,186 sequences; 661,712,633 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|17564284|ref|NP_505916.1| involved in lipopolysaccharide bios... 702 0.0
gi|39592042|emb|CAE75262.1| Hypothetical protein CBG23225 [Caeno... 559 e-158
gi|16131489|ref|NP_418075.1| involved in lipopolysaccharide bios... 89 2e-16
gi|15804162|ref|NP_290201.1| involved in lipopolysaccharide bios... 87 1e-15
gi|24114888|ref|NP_709398.1| involved in lipopolysaccharide bios... 83 2e-14
gi|13123728|gb|AAK12949.1| unknown [Campylobacter jejuni] 78 5e-13
gi|46487349|gb|AAS99070.1| Tgh003 [Campylobacter jejuni] 72 3e-11
gi|23489940|gb|EAA21830.1| similar to sentrin/SUMO-specific prot... 39 0.34
gi|16767739|ref|NP_463354.1| putative type II restriction enzyme... 36 2.2
gi|50745372|ref|XP_420083.1| PREDICTED: similar to chromosome 17... 35 3.7
gi|37806421|dbj|BAC99971.1| hypothetical protein [Oryza sativa (... 35 3.7
gi|50291639|ref|XP_448252.1| unnamed protein product [Candida gl... 35 3.7
gi|39584087|emb|CAE66493.1| Hypothetical protein CBG11773 [Caeno... 35 4.8
gi|46139583|ref|XP_391482.1| hypothetical protein FG11306.1 [Gib... 35 6.3
gi|15925470|ref|NP_373004.1| hypothetical protein SAV2480 [Staph... 35 6.3
gi|23500642|ref|NP_700082.1| secretion protein, putative [Brucel... 34 8.3
gi|27468956|ref|NP_765593.1| conserved hypothetical protein [Sta... 34 8.3
gi|17988726|ref|NP_541359.1| ACRIFLAVIN RESISTANCE PROTEIN E [Br... 34 8.3
gi|18309048|ref|NP_560982.1| amylopullulanase [Clostridium perfr... 34 8.3
gi|23612554|ref|NP_704115.1| cysteine repeat modular protein 2 h... 34 8.3
gi|9631444|ref|NP_048275.1| ORF MSV204 ALI motif gene family pro... 34 8.3
>gi|17564284|ref|NP_505916.1| involved in lipopolysaccharide
biosynthesis (79.3 kD) (5L974) [Caenorhabditis elegans]
gi|7507679|pir||T23108 hypothetical protein T11F9.12 - Caenorhabditis
elegans
gi|3878074|emb|CAA20938.1| Hypothetical protein T11F9.12
[Caenorhabditis elegans]
gi|3879697|emb|CAA98537.1| Hypothetical protein T11F9.12
[Caenorhabditis elegans]
Length = 688
Score = 702 bits (1812), Expect = 0.0
Identities = 370/512 (72%), Positives = 370/512 (72%)
Frame = -1
Query: 1539 DPNRHRYGQDRIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTEPATRSLLPLIVLRKF 1360
DPNRHRYGQDRI TEPATRSLLPLIVLRKF
Sbjct: 177 DPNRHRYGQDRIHHQHHHHHHHTTTTPSTTTSTTTTTTVAPTTTEPATRSLLPLIVLRKF 236
Query: 1359 LQPRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIFQMYYIXXXXXXXXXXQKL 1180
LQPR IFQMYYI QKL
Sbjct: 237 LQPRVLIVSITTSIIIIIELTLIFILIHVIICPILSIHILIFQMYYIQPRRNPQPQPQKL 296
Query: 1179 ERKPLLQPLKETTPRRXXXXXXXXXXXXXXHYSSTVRPXXXXTRESELDRWGFXXXXXXX 1000
ERKPLLQPLKETTPRR HYSSTVRP TRESELDRWGF
Sbjct: 297 ERKPLLQPLKETTPRRHHHGHHHHGTHHHHHYSSTVRPTTTTTRESELDRWGFVESVEDL 356
Query: 999 XXXXXXXXXXXXXXXXXXXXTXXXXXXXXXXXXXXXXXXXXPRHRQPEPTQVPAKRVERE 820
T PRHRQPEPTQVPAKRVERE
Sbjct: 357 SSEEVKSSLPSTTTPRSTTTTEEPMKFEEVVPEVVPEKPEVPRHRQPEPTQVPAKRVERE 416
Query: 819 VTLVTGFLDIGRGDWDIYRRPLETYHKFMETLLTLENNFVVFTDESSYDFVVKTRTKLGL 640
VTLVTGFLDIGRGDWDIYRRPLETYHKFMETLLTLENNFVVFTDESSYDFVVKTRTKLGL
Sbjct: 417 VTLVTGFLDIGRGDWDIYRRPLETYHKFMETLLTLENNFVVFTDESSYDFVVKTRTKLGL 476
Query: 639 MDKTKVHKITLDDLPLYSYINEAKKIINDELNNETFYRTIADLDMKTHPESISAEYNIVV 460
MDKTKVHKITLDDLPLYSYINEAKKIINDELNNETFYRTIADLDMKTHPESISAEYNIVV
Sbjct: 477 MDKTKVHKITLDDLPLYSYINEAKKIINDELNNETFYRTIADLDMKTHPESISAEYNIVV 536
Query: 459 NSKTHFLHNVTMENPFNSEHFVWLDAGYGHANENHFPYSYKWQPALPDGKISLIKVTPYF 280
NSKTHFLHNVTMENPFNSEHFVWLDAGYGHANENHFPYSYKWQPALPDGKISLIKVTPYF
Sbjct: 537 NSKTHFLHNVTMENPFNSEHFVWLDAGYGHANENHFPYSYKWQPALPDGKISLIKVTPYF 596
Query: 279 DEVSSYDLKRLYRKNVALLSGGFIAGDKHAIGQLHSIIHRKFIQLIYQNHVDDDQTLLTL 100
DEVSSYDLKRLYRKNVALLSGGFIAGDKHAIGQLHSIIHRKFIQLIYQNHVDDDQTLLTL
Sbjct: 597 DEVSSYDLKRLYRKNVALLSGGFIAGDKHAIGQLHSIIHRKFIQLIYQNHVDDDQTLLTL 656
Query: 99 AVNSFPQLFHIVLGDWFDAFRLFASDPEVQMG 4
AVNSFPQLFHIVLGDWFDAFRLFASDPEVQMG
Sbjct: 657 AVNSFPQLFHIVLGDWFDAFRLFASDPEVQMG 688