Homology by BLASTX


BLASTX 2.2.4 [Aug-26-2002]
Query= T01C3_9
         (1626 letters)

Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
           1,967,186 sequences; 661,712,633 total letters


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|17563674|ref|NP_506692.1| putative nuclear protein, with a co...  1053   0.0
gi|25342797|pir||E89308 protein T01C3.8 [imported] - Caenorhabdi...   882   0.0
gi|39583362|emb|CAE66336.1| Hypothetical protein CBG11587 [Caeno...   206   1e-51
gi|29250376|gb|EAA41871.1| GLP_158_51952_55209 [Giardia lamblia ...    42   0.056
gi|6323135|ref|NP_013207.1| Midasin, pseudo-hexameric assembly o...    40   0.16
gi|20069961|ref|NP_613165.1| vp80 capsid [Mamestra configurata n...    40   0.21
gi|33331793|gb|AAQ11101.1| P87/VP80 [Mamestra configurata nucleo...    40   0.21
gi|46228528|gb|EAK89398.1| hypothetical protein cgd8_1960 [Crypt...    39   0.36
gi|40789293|ref|NP_776123.2| centromere protein E; kinesin 10; k...    39   0.36
gi|20807912|ref|NP_623083.1| Chromosome segregation ATPases [The...    37   1.1
gi|19387225|gb|AAL87143.1| DEAD box RNA helicase Vasa [Melanotae...    37   1.4
gi|19387223|gb|AAL87142.1| DEAD box RNA helicase Vasa [Pantodon ...    37   1.8
gi|14318554|ref|NP_116687.1| Chromosome segregation and condensa...    37   1.8
gi|6521014|dbj|BAA88059.1| Vasa [Oncorhynchus mykiss]                  37   1.8
gi|50293017|ref|XP_448941.1| unnamed protein product [Candida gl...    37   1.8
gi|19387227|gb|AAL87144.1| DEAD box RNA helicase Vasa [Oncorhync...    37   1.8
gi|32406694|ref|XP_323960.1| predicted protein [Neurospora crass...    36   3.1
gi|7525093|ref|NP_051117.1| ycf1 [Arabidopsis thaliana] >gnl|BL_...    36   3.1
gi|28076951|ref|NP_081583.1| golgi phosphoprotein 2 [Mus musculu...    36   3.1
gi|23619170|ref|NP_705132.1| hypothetical protein [Plasmodium fa...    36   3.1
gi|37590208|gb|AAH59032.1| Cenpe protein [Mus musculus]                36   3.1
gi|23509848|ref|NP_702515.1| dynein beta chain, putative [Plasmo...    36   3.1
gi|37533452|ref|NP_921028.1| putative reverse transcriptase [Ory...    35   4.0
gi|39104462|dbj|BAD04052.1| vasa homologue [Leucopsarion petersii]     35   4.0
gi|19387219|gb|AAL87140.1| DEAD box RNA helicase Vasa [Hyphessob...    35   6.8
gi|23619226|ref|NP_705188.1| hypothetical protein [Plasmodium fa...    34   8.9
gi|23612858|ref|NP_704397.1| hypothetical protein [Plasmodium fa...    34   8.9
gi|3682|emb|CAA36211.1| unnamed protein product [Saccharomyces c...    34   8.9


>gi|17563674|ref|NP_506692.1| putative nuclear protein, with a coiled
            coil domain (62.2 kD) (5P483) [Caenorhabditis elegans]
 gi|7506841|pir||T24287 hypothetical protein T01C3.8 - Caenorhabditis
            elegans
 gi|5824589|emb|CAB01665.2| Hypothetical protein T01C3.8
            [Caenorhabditis elegans]
          Length = 541

 Score = 1053 bits (2722), Expect = 0.0
 Identities = 527/527 (100%), Positives = 527/527 (100%)
 Frame = +1

Query: 1    MDNSNGIGICSMGVVNAFDLDGLGNARRSCFSVKEARAHNPEWGPAASREEVAYVRSSET 180
            MDNSNGIGICSMGVVNAFDLDGLGNARRSCFSVKEARAHNPEWGPAASREEVAYVRSSET
Sbjct: 1    MDNSNGIGICSMGVVNAFDLDGLGNARRSCFSVKEARAHNPEWGPAASREEVAYVRSSET 60

Query: 181  GSLQITRKLMKFSISGRRGYSPWRTLQDALYCSLGRFHNGEHLFCIHSGPNHEFYYGQPI 360
            GSLQITRKLMKFSISGRRGYSPWRTLQDALYCSLGRFHNGEHLFCIHSGPNHEFYYGQPI
Sbjct: 61   GSLQITRKLMKFSISGRRGYSPWRTLQDALYCSLGRFHNGEHLFCIHSGPNHEFYYGQPI 120

Query: 361  LHSIDRFRSHRKPFPRCIIITTDGKRSKSVMRGLLNKRRSSNSTRPNTHITNLDTTELSN 540
            LHSIDRFRSHRKPFPRCIIITTDGKRSKSVMRGLLNKRRSSNSTRPNTHITNLDTTELSN
Sbjct: 121  LHSIDRFRSHRKPFPRCIIITTDGKRSKSVMRGLLNKRRSSNSTRPNTHITNLDTTELSN 180

Query: 541  EFMTSNRSRVFIGSFKKIKEYIDKLKNEMEQLDDFISVLRFVIINNAEKLKGNSEFADSL 720
            EFMTSNRSRVFIGSFKKIKEYIDKLKNEMEQLDDFISVLRFVIINNAEKLKGNSEFADSL
Sbjct: 181  EFMTSNRSRVFIGSFKKIKEYIDKLKNEMEQLDDFISVLRFVIINNAEKLKGNSEFADSL 240

Query: 721  GRLAQTFESSLTRFIFAYHFSSSVASLTETLEFCKGKMERPVLIEADNPRVRDVFSNIEC 900
            GRLAQTFESSLTRFIFAYHFSSSVASLTETLEFCKGKMERPVLIEADNPRVRDVFSNIEC
Sbjct: 241  GRLAQTFESSLTRFIFAYHFSSSVASLTETLEFCKGKMERPVLIEADNPRVRDVFSNIEC 300

Query: 901  KLVRPISEIASLLPTQESTLENNNISPAIVSQYLTESTQKLKILTMLIKKERDARAADNG 1080
            KLVRPISEIASLLPTQESTLENNNISPAIVSQYLTESTQKLKILTMLIKKERDARAADNG
Sbjct: 301  KLVRPISEIASLLPTQESTLENNNISPAIVSQYLTESTQKLKILTMLIKKERDARAADNG 360

Query: 1081 RSGRRDKPRRERILVITRTTETCIRVMMYLRLKMQTLAVNLRYNIHKITTCDSEEDVEKR 1260
            RSGRRDKPRRERILVITRTTETCIRVMMYLRLKMQTLAVNLRYNIHKITTCDSEEDVEKR
Sbjct: 361  RSGRRDKPRRERILVITRTTETCIRVMMYLRLKMQTLAVNLRYNIHKITTCDSEEDVEKR 420

Query: 1261 NFEFRTGNLDVLVIDWRSIRAVHRGAVDTIVMFDSPHPLYFQTIMETELQNLASIIGVKL 1440
            NFEFRTGNLDVLVIDWRSIRAVHRGAVDTIVMFDSPHPLYFQTIMETELQNLASIIGVKL
Sbjct: 421  NFEFRTGNLDVLVIDWRSIRAVHRGAVDTIVMFDSPHPLYFQTIMETELQNLASIIGVKL 480

Query: 1441 KLYMIIDQNKDFRLVREYLKFLECNKTRAPTWFRDLYQKYLADRQSR 1581
            KLYMIIDQNKDFRLVREYLKFLECNKTRAPTWFRDLYQKYLADRQSR
Sbjct: 481  KLYMIIDQNKDFRLVREYLKFLECNKTRAPTWFRDLYQKYLADRQSR 527


>gi|25342797|pir||E89308 protein T01C3.8 [imported] - Caenorhabditis
            elegans
          Length = 648

 Score =  882 bits (2278), Expect = 0.0
 Identities = 471/539 (87%), Positives = 480/539 (88%), Gaps = 25/539 (4%)
 Frame = +1

Query: 40   VVNAFDLDGLGNARRSCFSVKEARAHNPEWGPAASREEVAYVRSSETGSLQITRKLMKFS 219
            VVNAFDLDGLGNARRSCFSVKEARAHNPEWGPAASREEVAYVRSSETGSLQITRKLMKFS
Sbjct: 99   VVNAFDLDGLGNARRSCFSVKEARAHNPEWGPAASREEVAYVRSSETGSLQITRKLMKFS 158

Query: 220  ISGRRGYSPWRTLQDALYCSLGRFH--NGEH---LFCIHSG----PNHEFYYGQPILHS- 369
            I   R + P    ++    S+      +GEH   L+   SG     N  F + Q  + S
Sbjct: 159  I---RSFDPVVNSENTFIFSVAAEATVHGEHCKMLYIAVSGVFTTANICFAFIQAQITSF 215

Query: 370  ---------------IDRFRSHRKPFPRCIIITTDGKRSKSVMRGLLNKRRSSNSTRPNT 504
                           I   +   KPFPRCIIITTDGKRSKSVMRGLLNKRRSSNSTRPNT
Sbjct: 216  TTDNPSCTPSTDFVRIGLAKLVEKPFPRCIIITTDGKRSKSVMRGLLNKRRSSNSTRPNT 275

Query: 505  HITNLDTTELSNEFMTSNRSRVFIGSFKKIKEYIDKLKNEMEQLDDFISVLRFVIINNAE 684
            HITNLDTTELSNEFMTSNRSRVFIGSFKKIKEYIDKLKNEMEQLDDFISVLRFVIINNAE
Sbjct: 276  HITNLDTTELSNEFMTSNRSRVFIGSFKKIKEYIDKLKNEMEQLDDFISVLRFVIINNAE 335

Query: 685  KLKGNSEFADSLGRLAQTFESSLTRFIFAYHFSSSVASLTETLEFCKGKMERPVLIEADN 864
            KLKGNSEFADSLGRLAQTFESSLTRFIFAYHFSSSVASLTETLEFCKGKMERPVLIEADN
Sbjct: 336  KLKGNSEFADSLGRLAQTFESSLTRFIFAYHFSSSVASLTETLEFCKGKMERPVLIEADN 395

Query: 865  PRVRDVFSNIECKLVRPISEIASLLPTQESTLENNNISPAIVSQYLTESTQKLKILTMLI 1044
            PRVRDVFSNIECKLVRPISEIASLLPTQESTLENNNISPAIVSQYLTESTQKLKILTMLI
Sbjct: 396  PRVRDVFSNIECKLVRPISEIASLLPTQESTLENNNISPAIVSQYLTESTQKLKILTMLI 455

Query: 1045 KKERDARAADNGRSGRRDKPRRERILVITRTTETCIRVMMYLRLKMQTLAVNLRYNIHKI 1224
            KKERDARAADNGRSGRRDKPRRERILVITRTTETCIRVMMYLRLKMQTLAVNLRYNIHKI
Sbjct: 456  KKERDARAADNGRSGRRDKPRRERILVITRTTETCIRVMMYLRLKMQTLAVNLRYNIHKI 515

Query: 1225 TTCDSEEDVEKRNFEFRTGNLDVLVIDWRSIRAVHRGAVDTIVMFDSPHPLYFQTIMETE 1404
            TTCDSEEDVEKRNFEFRTGNLDVLVIDWRSIRAVHRGAVDTIVMFDSPHPLYFQTIMETE
Sbjct: 516  TTCDSEEDVEKRNFEFRTGNLDVLVIDWRSIRAVHRGAVDTIVMFDSPHPLYFQTIMETE 575

Query: 1405 LQNLASIIGVKLKLYMIIDQNKDFRLVREYLKFLECNKTRAPTWFRDLYQKYLADRQSR 1581
            LQNLASIIGVKLKLYMIIDQNKDFRLVREYLKFLECNKTRAPTWFRDLYQKYLADRQSR
Sbjct: 576  LQNLASIIGVKLKLYMIIDQNKDFRLVREYLKFLECNKTRAPTWFRDLYQKYLADRQSR 634



 Score =  121 bits (303), Expect = 6e-26
 Identities = 58/58 (100%), Positives = 58/58 (100%)
 Frame = +2

Query: 221 SVAAEATVHGEHCKMLYIAVSGVFTTANICFAFIQAQITSFTTDNPSCTPSTDFVRIG 394
           SVAAEATVHGEHCKMLYIAVSGVFTTANICFAFIQAQITSFTTDNPSCTPSTDFVRIG
Sbjct: 175 SVAAEATVHGEHCKMLYIAVSGVFTTANICFAFIQAQITSFTTDNPSCTPSTDFVRIG 232




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