Homology by BLASTX
BLASTX 2.2.4 [Aug-26-2002]
Query= R10E8_2
(1023 letters)
Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
1,967,186 sequences; 661,712,633 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|17563088|ref|NP_507568.1| putative mitochondrial protein fami... 626 e-178
gi|34555885|emb|CAB04643.2| Hypothetical protein R10E8.1 [Caenor... 580 e-164
gi|17563090|ref|NP_507570.1| putative cytoplasmic protein family... 251 2e-65
gi|17561576|ref|NP_507457.1| predicted CDS, putative protein fam... 244 2e-63
gi|50507783|emb|CAB04645.2| Hypothetical protein R10E8.2 [Caenor... 244 3e-63
gi|17563098|ref|NP_507572.1| protein of unknown function DUF38 a... 100 5e-20
gi|25354037|pir||D89407 protein R10E8.6 [imported] - Caenorhabdi... 100 5e-20
gi|50470582|emb|CAA16306.3| Hypothetical protein Y20C6A.1 [Caeno... 72 2e-11
gi|32566899|ref|NP_507397.2| protein of unknown function DUF38 a... 71 5e-11
gi|7509472|pir||T22376 hypothetical protein Y20C6A.1 - Caenorhab... 71 5e-11
gi|17562486|ref|NP_507377.1| putative cytoplasmic protein family... 65 2e-09
gi|17564014|ref|NP_506829.1| predicted CDS, protein of unknown f... 65 2e-09
gi|32566828|ref|NP_872158.1| cyclin-like F-box family member (5S... 64 6e-09
gi|39590024|emb|CAE61022.1| Hypothetical protein CBG04764 [Caeno... 63 1e-08
gi|39596276|emb|CAE69914.1| Hypothetical protein CBG16271 [Caeno... 62 2e-08
gi|39582869|emb|CAE71645.1| Hypothetical protein CBG18616 [Caeno... 62 2e-08
gi|39590174|emb|CAE61172.1| Hypothetical protein CBG04940 [Caeno... 62 3e-08
gi|7510422|pir||T27342 hypothetical protein Y6G8.2 - Caenorhabdi... 62 3e-08
gi|17565246|ref|NP_507455.1| protein of unknown function DUF38 a... 62 3e-08
gi|17531399|ref|NP_496885.1| protein of unknown function DUF38 a... 60 6e-08
gi|17559794|ref|NP_507565.1| putative protein family member (30.... 59 2e-07
gi|17565416|ref|NP_507566.1| putative cytoplasmic protein family... 58 4e-07
gi|17563094|ref|NP_507569.1| predicted CDS, putative protein fam... 57 7e-07
gi|50507813|emb|CAB07204.2| Hypothetical protein F47H4.2 [Caenor... 56 1e-06
gi|17561144|ref|NP_507396.1| protein of unknown function DUF38 a... 56 1e-06
gi|17562492|ref|NP_507378.1| predicted CDS, putative cytoplasmic... 55 2e-06
gi|39590109|emb|CAE61107.1| Hypothetical protein CBG04864 [Caeno... 55 3e-06
gi|17536141|ref|NP_494089.1| putative cytoplasmic protein family... 53 1e-05
gi|39582930|emb|CAE72995.1| Hypothetical protein CBG20341 [Caeno... 52 3e-05
gi|17561156|ref|NP_507395.1| predicted CDS, putative cytoplasmic... 52 3e-05
gi|17558534|ref|NP_507452.1| predicted CDS, cyclin-like F-box an... 52 3e-05
gi|39589971|emb|CAE60969.1| Hypothetical protein CBG04701 [Caeno... 50 8e-05
gi|17533921|ref|NP_494273.1| putative cytoplasmic protein family... 50 1e-04
gi|49035157|gb|AAT48620.1| Hypothetical protein F42G2.4a [Caenor... 49 1e-04
gi|32564782|ref|NP_872001.1| cyclin-like F-box and Protein of un... 49 1e-04
gi|7503264|pir||T32285 hypothetical protein F42G2.4 - Caenorhabd... 49 1e-04
gi|39587817|emb|CAE67835.1| Hypothetical protein CBG13419 [Caeno... 49 1e-04
gi|49035158|gb|AAT48621.1| Hypothetical protein F42G2.4b [Caenor... 49 1e-04
gi|25148588|ref|NP_494270.2| cyclin-like F-box and Protein of un... 49 1e-04
gi|39590113|emb|CAE61111.1| Hypothetical protein CBG04868 [Caeno... 48 4e-04
gi|39582417|emb|CAE74801.1| Hypothetical protein CBG22632 [Caeno... 47 0.001
gi|17560982|ref|NP_507061.1| protein of unknown function DUF38 a... 46 0.001
gi|17558050|ref|NP_503929.1| cyclin-like F-box and Protein of un... 46 0.001
gi|39582866|emb|CAE71642.1| Hypothetical protein CBG18613 [Caeno... 45 0.002
gi|17555928|ref|NP_499435.1| putative cytoplasmic protein family... 45 0.002
gi|39590091|emb|CAE61089.1| Hypothetical protein CBG04842 [Caeno... 44 0.006
gi|39588757|emb|CAE58281.1| Hypothetical protein CBG01388 [Caeno... 44 0.006
gi|17532539|ref|NP_494092.1| protein of unknown function DUF38 a... 44 0.008
gi|39587823|emb|CAE67841.1| Hypothetical protein CBG13427 [Caeno... 43 0.013
gi|39587340|emb|CAE74994.1| Hypothetical protein CBG22887 [Caeno... 43 0.013
gi|32699248|gb|AAB70969.2| Hypothetical protein C08E3.10 [Caenor... 43 0.013
gi|17531641|ref|NP_494015.1| cyclin-like F-box and Protein of un... 43 0.013
gi|7508625|pir||T28991 hypothetical protein T28A11.21 - Caenorha... 42 0.030
gi|32567140|ref|NP_503905.2| predicted CDS, cyclin-like F-box an... 42 0.030
gi|17533287|ref|NP_494269.1| predicted CDS, putative cytoplasmic... 42 0.030
gi|39582408|emb|CAE74792.1| Hypothetical protein CBG22623 [Caeno... 42 0.030
gi|17532541|ref|NP_494091.1| protein of unknown function DUF38 a... 41 0.050
gi|17556779|ref|NP_497368.1| predicted CDS, cyclin-like F-box an... 40 0.066
gi|39579280|emb|CAE56953.1| Hypothetical protein CBG24803 [Caeno... 40 0.066
gi|39588236|emb|CAE68161.1| Hypothetical protein CBG13818 [Caeno... 40 0.066
gi|17566470|ref|NP_507896.1| feminization Of Germline FOG-2, cyc... 40 0.086
gi|17566466|ref|NP_507893.1| cyclin-like F-box and Protein of un... 40 0.11
gi|17540810|ref|NP_500353.1| protein of unknown function DUF38 a... 40 0.11
gi|39587359|emb|CAE75013.1| Hypothetical protein CBG22915 [Caeno... 39 0.15
gi|39590098|emb|CAE61096.1| Hypothetical protein CBG04851 [Caeno... 38 0.33
gi|39587353|emb|CAE75007.1| Hypothetical protein CBG22908 [Caeno... 38 0.33
gi|39582868|emb|CAE71644.1| Hypothetical protein CBG18615 [Caeno... 38 0.43
gi|7507461|pir||T33394 hypothetical protein T08E11.1 - Caenorhab... 38 0.43
gi|39582411|emb|CAE74795.1| Hypothetical protein CBG22626 [Caeno... 38 0.43
gi|25148484|ref|NP_494090.2| protein of unknown function DUF38 a... 37 0.56
gi|17531633|ref|NP_494010.1| cyclin-like F-box and Protein of un... 37 0.56
gi|39589974|emb|CAE60972.1| Hypothetical protein CBG04704 [Caeno... 37 0.73
gi|39582867|emb|CAE71643.1| Hypothetical protein CBG18614 [Caeno... 36 1.2
gi|39590114|emb|CAE61112.1| Hypothetical protein CBG04869 [Caeno... 36 1.2
gi|17557506|ref|NP_504892.1| cyclin-like F-box and Protein of un... 36 1.6
gi|17556594|ref|NP_497378.1| predicted CDS, cyclin-like F-box an... 36 1.6
gi|17540812|ref|NP_500352.1| protein of unknown function DUF38 a... 36 1.6
gi|39589945|emb|CAE60943.1| Hypothetical protein CBG04669 [Caeno... 36 1.6
gi|39587355|emb|CAE75009.1| Hypothetical protein CBG22910 [Caeno... 35 2.1
gi|39590092|emb|CAE61090.1| Hypothetical protein CBG04843 [Caeno... 35 2.1
gi|17566468|ref|NP_507895.1| cyclin-like F-box and Protein of un... 35 2.8
gi|17555028|ref|NP_497303.1| cyclin-like F-box and Protein of un... 35 2.8
gi|17510235|ref|NP_493038.1| cyclin-like F-box and Protein of un... 35 2.8
gi|39580079|emb|CAE56839.1| Hypothetical protein CBG24664 [Caeno... 35 2.8
gi|17566462|ref|NP_507892.1| cyclin-like F-box and Protein of un... 35 3.6
gi|17556719|ref|NP_497375.1| predicted CDS, cyclin-like F-box an... 35 3.6
gi|32565233|ref|NP_494134.2| protein of unknown function DUF38 a... 34 4.7
gi|7511049|pir||T32415 hypothetical protein ZK250.5 - Caenorhabd... 34 4.7
gi|45916657|ref|ZP_00195632.2| COG0642: Signal transduction hist... 34 4.7
gi|50740411|ref|XP_419454.1| PREDICTED: similar to thyroid adeno... 34 4.7
gi|17563092|ref|NP_507567.1| cyclin-like F-box and Protein of un... 34 4.7
gi|47606781|sp|Q09336|YOF9_CAEEL Hypothetical protein ZK1290.9 i... 34 4.7
gi|23502947|ref|NP_699074.1| sensory box histidine kinase, putat... 34 6.2
gi|17988310|ref|NP_540944.1| ALKALINE PHOSPHATASE SYNTHESIS SENS... 34 6.2
gi|17540364|ref|NP_500327.1| putative cytoplasmic protein family... 33 8.0
gi|7500383|pir||T21695 hypothetical protein F33C8.2 - Caenorhabd... 33 8.0
gi|17567309|ref|NP_510401.1| cyclin-like F-box and Protein of un... 33 8.0
gi|17567431|ref|NP_510444.1| predicted CDS, putative protein (XP... 33 8.0
>gi|17563088|ref|NP_507568.1| putative mitochondrial protein family
member (5S724) [Caenorhabditis elegans]
gi|7506581|pir||T24143 hypothetical protein R10E8.1 - Caenorhabditis
elegans
Length = 340
Score = 626 bits (1615), Expect = e-178
Identities = 320/340 (94%), Positives = 320/340 (94%)
Frame = -1
Query: 1023 MCTCKCRFRLRKKTIXXXXXXXXXLAKREQDVDVNCSVASLALKTLKLTQIVIIRTTLLE 844
MCTCKCRFRLRKKTI LAKREQDVDVNCSVASLALKTLKLTQIVIIRTTLLE
Sbjct: 1 MCTCKCRFRLRKKTILNLTTCLNCLAKREQDVDVNCSVASLALKTLKLTQIVIIRTTLLE 60
Query: 843 TSISANYVVFKDGKQNPQEFMYKKTGNGCTFEFEGRKEIFKNQDYLALFFSHLKTILFPY 664
TSISANYVVFKDGKQNPQEFMYKKTGNGCTFEFEGRKEIFKNQDYLALFFSHLKTILFPY
Sbjct: 61 TSISANYVVFKDGKQNPQEFMYKKTGNGCTFEFEGRKEIFKNQDYLALFFSHLKTILFPY 120
Query: 663 TIISELSFSLVNNDVESGARTLEAIKNTLSSKKPSLKINELVFSFSGQPMFAPAIAITET 484
TIISELSFSLVNNDVESGARTLEAIKNTLSSKKPSLKINELVFSFSGQPMFAPAIAITET
Sbjct: 121 TIISELSFSLVNNDVESGARTLEAIKNTLSSKKPSLKINELVFSFSGQPMFAPAIAITET 180
Query: 483 LDSGPLKSIHLSTDKEEEMDCDGLTKLPHWKRIKSLLIEGFIVSAPLEHFLHLPEVTITM 304
LDSGPLKSIHLSTDKEEEMDCDGLTKLPHWKRIKSLLIEGFIVSAPLEHFLHLPEVTITM
Sbjct: 181 LDSGPLKSIHLSTDKEEEMDCDGLTKLPHWKRIKSLLIEGFIVSAPLEHFLHLPEVTITM 240
Query: 303 QSITIFNXXXXXXXXXXXKSEKKFVLKYKLDDGEIADNVHAVFEQASSTCEGIIKQWVYP 124
QSITIFN KSEKKFVLKYKLDDGEIADNVHAVFEQASSTCEGIIKQWVYP
Sbjct: 241 QSITIFNLKLLKKHFLGLKSEKKFVLKYKLDDGEIADNVHAVFEQASSTCEGIIKQWVYP 300
Query: 123 KNGNMEIRVEYRQHHGFKDHKFTFIALRESQEQSILLTVD 4
KNGNMEIRVEYRQHHGFKDHKFTFIALRESQEQSILLTVD
Sbjct: 301 KNGNMEIRVEYRQHHGFKDHKFTFIALRESQEQSILLTVD 340