Homology by BLASTX
BLASTX 2.2.4 [Aug-26-2002]
Query= R107_8
(3192 letters)
Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
1,967,186 sequences; 661,712,633 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|17554664|ref|NP_499005.1| CLIP-associating protein 2 family m... 1972 0.0
gi|345364|pir||S30876 hypothetical protein R107.6 - Caenorhabdit... 1961 0.0
gi|39590667|emb|CAE65037.1| Hypothetical protein CBG09877 [Caeno... 1072 0.0
gi|39582028|emb|CAE64459.1| Hypothetical protein CBG09173 [Caeno... 711 0.0
gi|17552110|ref|NP_498649.1| CLIP-associating protein 2 family m... 706 0.0
gi|280555|pir||S28293 hypothetical protein ZC84.3 - Caenorhabdit... 476 e-132
gi|17556793|ref|NP_499034.1| CLIP-associating protein 2 family m... 462 e-128
gi|39585127|emb|CAE62778.1| Hypothetical protein CBG06947 [Caeno... 460 e-128
gi|280556|pir||S28294 hypothetical protein ZC84.3a - Caenorhabdi... 441 e-122
gi|47216132|emb|CAG10006.1| unnamed protein product [Tetraodon n... 228 7e-58
gi|38073278|ref|XP_355227.1| CLASP1 [Mus musculus] 166 3e-39
gi|46309515|ref|NP_996955.1| hypothetical protein zgc:77279 [Dan... 158 9e-37
gi|16758540|ref|NP_446174.1| CLIP-associating protein 2 [Rattus ... 153 3e-35
gi|26335757|dbj|BAC31579.1| unnamed protein product [Mus musculus] 151 8e-35
gi|42656712|ref|XP_291057.4| CLIP-associating protein 2 [Homo sa... 150 2e-34
gi|7513045|pir||T00386 hypothetical protein KIAA0627 - human (fr... 150 2e-34
gi|7513102|pir||T00387 KIAA0622 protein - human (fragment) >gnl|... 148 9e-34
gi|31563537|ref|NP_056097.1| CLIP-associating protein 1; multipl... 148 9e-34
gi|20810065|gb|AAH29035.1| CLASP2 protein [Homo sapiens] 144 1e-32
gi|21749825|dbj|BAC03667.1| unnamed protein product [Homo sapiens] 144 1e-32
gi|47219190|emb|CAG11208.1| unnamed protein product [Tetraodon n... 140 1e-31
gi|50732912|ref|XP_418824.1| PREDICTED: similar to KIAA0627 prot... 130 3e-28
gi|50750878|ref|XP_426599.1| PREDICTED: similar to CLIP-associat... 129 3e-28
gi|33438165|dbj|BAC41436.2| mKIAA0627 protein [Mus musculus] 127 2e-27
gi|38090140|ref|XP_135174.3| CLIP-associating protein CLASP2 [Mu... 125 5e-27
gi|47214380|emb|CAG00861.1| unnamed protein product [Tetraodon n... 124 2e-26
gi|48098291|ref|XP_394024.1| similar to CLIP-associating protein... 117 2e-24
gi|31198601|ref|XP_308248.1| ENSANGP00000009334 [Anopheles gambi... 115 7e-24
gi|26327099|dbj|BAC27293.1| unnamed protein product [Mus musculus] 115 9e-24
gi|50370265|gb|AAH75708.1| Unknown (protein for IMAGE:4910518) [... 104 1e-20
gi|13508653|emb|CAC35163.1| CLIP-associating protein CLASP1 [Mus... 104 2e-20
gi|34980884|gb|AAH57312.1| Unknown (protein for IMAGE:6824890) [... 104 2e-20
gi|26354994|dbj|BAB24639.2| unnamed protein product [Mus musculus] 104 2e-20
gi|28972317|dbj|BAC65612.1| mKIAA0622 protein [Mus musculus] 104 2e-20
gi|34879404|ref|XP_222568.2| similar to CLIP-associating protein... 104 2e-20
gi|24667856|ref|NP_524651.2| CG32435-PA [Drosophila melanogaster... 103 2e-20
gi|7527326|dbj|BAA94248.1| microtubule associated-protein orbit ... 103 2e-20
gi|50603946|gb|AAH77460.1| Unknown (protein for IMAGE:4679959) [... 99 6e-19
gi|6808437|emb|CAB70852.1| hypothetical protein [Homo sapiens] 97 2e-18
gi|34364809|emb|CAE45842.1| hypothetical protein [Homo sapiens] 97 2e-18
gi|15079369|gb|AAH11530.1| Unknown (protein for IMAGE:3874558) [... 97 2e-18
gi|50370047|gb|AAH76002.1| Unknown (protein for IMAGE:7054863) [... 96 4e-18
gi|13508539|emb|CAC35161.1| CLASP2 [Mus musculus] 95 1e-17
gi|25411970|pir||B84586 hypothetical protein At2g20190 [imported... 86 6e-15
gi|38346560|emb|CAE04721.2| OSJNBa0043L24.9 [Oryza sativa (japon... 86 6e-15
gi|42570286|ref|NP_849997.2| CLIP-associating protein (CLASP) -r... 86 6e-15
gi|38567848|emb|CAE05691.2| OSJNBb0002J11.18 [Oryza sativa (japo... 85 1e-14
gi|26348761|dbj|BAC38020.1| unnamed protein product [Mus musculus] 79 9e-13
gi|21619136|gb|AAH32563.1| CLASP1 protein [Homo sapiens] 72 6e-11
gi|47200862|emb|CAF88184.1| unnamed protein product [Tetraodon n... 70 3e-10
gi|20072391|gb|AAH26688.1| Clasp2 protein [Mus musculus] 68 2e-09
gi|10437147|dbj|BAB14995.1| unnamed protein product [Homo sapiens] 67 3e-09
gi|17550660|ref|NP_510464.1| putative nuclear protein family mem... 65 1e-08
gi|31198603|ref|XP_308249.1| ENSANGP00000011035 [Anopheles gambi... 63 5e-08
gi|47847664|dbj|BAD21445.1| CLIP-associating protein 1-like [Ory... 61 2e-07
gi|47848182|dbj|BAD22009.1| CLIP-associating protein-like [Oryza... 60 4e-07
gi|32415842|ref|XP_328399.1| hypothetical protein [Neurospora cr... 54 2e-05
gi|29251092|gb|EAA42576.1| GLP_487_14754_11830 [Giardia lamblia ... 53 4e-05
gi|26330031|dbj|BAC28754.1| unnamed protein product [Mus musculus] 49 8e-04
gi|12836868|dbj|BAB23842.1| unnamed protein product [Mus musculu... 49 8e-04
gi|46123627|ref|XP_386367.1| hypothetical protein FG06191.1 [Gib... 49 0.001
gi|39580870|emb|CAE73868.1| Hypothetical protein CBG21458 [Caeno... 46 0.006
gi|48716880|dbj|BAD23576.1| unknown protein [Oryza sativa (japon... 45 0.008
gi|45735800|dbj|BAD13163.1| unknown protein [Oryza sativa (japon... 45 0.008
gi|7507460|pir||T24690 hypothetical protein T08D2.8 - Caenorhabd... 43 0.042
gi|15925644|ref|NP_373178.1| hypothetical protein SAV2654 [Staph... 42 0.12
gi|18029287|gb|AAL56465.1| similar to importin beta [Oikopleura ... 42 0.12
gi|49487433|ref|YP_044654.1| putative cell wall-anchored protein... 41 0.21
gi|21284304|ref|NP_647392.1| ORFID:MW2575~hypothetical protein, ... 41 0.21
gi|17534309|ref|NP_494220.1| microtubule Associated Protein (2C5... 40 0.36
gi|33300513|emb|CAE18042.1| Hypothetical protein Y53C12A.7 [Caen... 39 1.0
gi|45181620|gb|AAS55465.1| ORF2 [Klebsiella pneumoniae] 38 1.4
gi|47230298|emb|CAG10712.1| unnamed protein product [Tetraodon n... 38 1.8
gi|27469167|ref|NP_765804.1| streptococcal hemagglutinin protein... 38 1.8
gi|50548365|ref|XP_501652.1| hypothetical protein [Yarrowia lipo... 38 1.8
gi|22788805|ref|NP_690517.1| hypothetical protein K06A9.1a [Heli... 38 1.8
gi|31211711|ref|XP_314825.1| ENSANGP00000011098 [Anopheles gambi... 38 1.8
gi|31233052|ref|XP_318809.1| ENSANGP00000010194 [Anopheles gambi... 38 1.8
gi|50260606|gb|EAL23259.1| hypothetical protein CNBA3750 [Crypto... 37 2.3
gi|7513069|pir||T00356 hypothetical protein KIAA0690 - human (fr... 37 3.0
gi|15987121|ref|NP_055994.1| KIAA0690 [Homo sapiens] >gnl|BL_ORD... 37 3.0
gi|40789092|ref|NP_955518.1| expressed sequence AA408556 [Mus mu... 36 5.1
gi|19704032|ref|NP_603594.1| Alanyl-tRNA synthetase [Fusobacteri... 36 6.7
gi|25407398|pir||F85075 hypothetical protein AT4g07680 [imported... 36 6.7
gi|29249819|gb|EAA41323.1| GLP_163_41378_38205 [Giardia lamblia ... 36 6.7
gi|7460853|pir||T03824 probable immediate early protein 2 - huma... 36 6.7
gi|25145189|ref|NP_497509.2| yeast translation activator GCN1 li... 36 6.7
gi|17543898|ref|NP_502737.1| MEGF6 (4P83) [Caenorhabditis elegan... 35 8.8
gi|34763053|ref|ZP_00144027.1| Alanyl-tRNA synthetase [Fusobacte... 35 8.8
gi|39597912|emb|CAE68604.1| Hypothetical protein CBG14482 [Caeno... 35 8.8
gi|32563705|ref|NP_871899.1| putative protein, with 5 coiled coi... 35 8.8
>gi|17554664|ref|NP_499005.1| CLIP-associating protein 2 family
member, CLASP family of microtubule-binding proteins
CLS-2 (cls-2) [Caenorhabditis elegans]
gi|732211|sp|P32744|YNH6_CAEEL Hypothetical protein R107.6 in
chromosome III
gi|25395900|pir||E88546 protein R107.6 [imported] - Caenorhabditis
elegans
gi|3879037|emb|CAA78472.1| Hypothetical protein R107.6
[Caenorhabditis elegans]
Length = 1063
Score = 1972 bits (5109), Expect = 0.0
Identities = 1021/1063 (96%), Positives = 1021/1063 (96%)
Frame = +1
Query: 1 MTNPCRAISQFALDTECLFCVCKLLDFLILSIFAFFHNIYIFQMSRVISRSTPGGTCIVS 180
MTNPCRAISQFALDTECLFCVCKLLDFLILSIFAFFHNIYIFQMSRVISRSTPGGTCIVS
Sbjct: 1 MTNPCRAISQFALDTECLFCVCKLLDFLILSIFAFFHNIYIFQMSRVISRSTPGGTCIVS 60
Query: 181 KDDFLKSFEEVPKMEISSPSDFKEKLDQTIETLSKGQEDWNKRMNKLKQIRSMVVHGEDV 360
KDDFLKSFEEVPKMEISSPSDFKEKLDQTIETLSKGQEDWNKRMNKLKQIRSMVVHGEDV
Sbjct: 61 KDDFLKSFEEVPKMEISSPSDFKEKLDQTIETLSKGQEDWNKRMNKLKQIRSMVVHGEDV 120
Query: 361 IGREQLLSQLVRLTDCLDLSVKDLRSQILREAAITCGFLFKRFGTDVRQIAERCLPSAFA 540
IGREQLLSQLVRLTDCLDLSVKDLRSQILREAAITCGFLFKRFGTDVRQIAERCLPSAFA
Sbjct: 121 IGREQLLSQLVRLTDCLDLSVKDLRSQILREAAITCGFLFKRFGTDVRQIAERCLPSAFA 180
Query: 541 QVAVSTKVMATCGAVLTLFIVEFIQTKQIFTCIASYSTSKDKNQRRQLCALLEIVLEHWN 720
QVAVSTKVMATCGAVLTLFIVEFIQTKQIFTCIASYSTSKDKNQRRQLCALLEIVLEHWN
Sbjct: 181 QVAVSTKVMATCGAVLTLFIVEFIQTKQIFTCIASYSTSKDKNQRRQLCALLEIVLEHWN 240
Query: 721 EKIKRTVLPQIGELIKAAICDADPETRVAGRKAFSKLDALHSTEADKLFASVDSSKQKML 900
EKIKRTVLPQIGELIKAAICDADPETRVAGRKAFSKLDALHSTEADKLFASVDSSKQKML
Sbjct: 241 EKIKRTVLPQIGELIKAAICDADPETRVAGRKAFSKLDALHSTEADKLFASVDSSKQKML 300
Query: 901 RXXXXXXXXXXXXXERGTAPFRSKLSAGSIGGIRNAPNISSKFLAQRSASAIDTKQVTRM 1080
R ERGTAPFRSKLSAGSIGGIRNAPNISSKFLAQRSASAIDTKQVTRM
Sbjct: 301 RASDAASSSTSINSERGTAPFRSKLSAGSIGGIRNAPNISSKFLAQRSASAIDTKQVTRM 360
Query: 1081 ATSVSRTPNIRPMTTRTLSKIDTSPGGSKFARPTVGALGSRTSSNLRARGSVPTXXXXXX 1260
ATSVSRTPNIRPMTTRTLSKIDTSPGGSKFARPTVGALGSRTSSNLRARGSVPT
Sbjct: 361 ATSVSRTPNIRPMTTRTLSKIDTSPGGSKFARPTVGALGSRTSSNLRARGSVPTSQPGSR 420
Query: 1261 XXXXXXXXXATEAFPAEMQRVKSNLGSNSFVSSLSAEEATKLQKAMNTAKESLRQPSRND 1440
ATEAFPAEMQRVKSNLGSNSFVSSLSAEEATKLQKAMNTAKESLRQPSRND
Sbjct: 421 NGSPPRRPSATEAFPAEMQRVKSNLGSNSFVSSLSAEEATKLQKAMNTAKESLRQPSRND 480
Query: 1441 DDEFLLPKRPTPQKATPQKSALDTSRVEEVIRACSSTSANEKREGIKMLAGIVSEPNLSN 1620
DDEFLLPKRPTPQKATPQKSALDTSRVEEVIRACSSTSANEKREGIKMLAGIVSEPNLSN
Sbjct: 481 DDEFLLPKRPTPQKATPQKSALDTSRVEEVIRACSSTSANEKREGIKMLAGIVSEPNLSN 540
Query: 1621 AEIKSLGAVLNRLLGESTNQIVLESISSFVKTHHPRLSDWXXXXXXXXXXXXXXEMTLNS 1800
AEIKSLGAVLNRLLGESTNQIVLESISSFVKTHHPRLSDW EMTLNS
Sbjct: 541 AEIKSLGAVLNRLLGESTNQIVLESISSFVKTHHPRLSDWLKLGLGKLFAKKGAEMTLNS 600
Query: 1801 KKQISTTISCILSSFDPTLQLKSTCELVCDPIHLMSPKSRVVLLEYLNELLGKYMERGSS 1980
KKQISTTISCILSSFDPTLQLKSTCELVCDPIHLMSPKSRVVLLEYLNELLGKYMERGSS
Sbjct: 601 KKQISTTISCILSSFDPTLQLKSTCELVCDPIHLMSPKSRVVLLEYLNELLGKYMERGSS 660
Query: 1981 FNTKEMKATILKMFSWMADQRNEQLITPHGEKVLCSLFALNNADFSALFNDFNPDYRDWA 2160
FNTKEMKATILKMFSWMADQRNEQLITPHGEKVLCSLFALNNADFSALFNDFNPDYRDWA
Sbjct: 661 FNTKEMKATILKMFSWMADQRNEQLITPHGEKVLCSLFALNNADFSALFNDFNPDYRDWA 720
Query: 2161 YKVLQSHGHDQHVPQQDAVSEEACVRATISTTAAQIEDFVVSRNLDMTPVKSPSTRAISS 2340
YKVLQSHGHDQHVPQQDAVSEEACVRATISTTAAQIEDFVVSRNLDMTPVKSPSTRAISS
Sbjct: 721 YKVLQSHGHDQHVPQQDAVSEEACVRATISTTAAQIEDFVVSRNLDMTPVKSPSTRAISS 780
Query: 2341 GFKRVDAEPLRPLSSEMNSQHRDEELSFNESFDRLKLNSTTHLIDDTSEQSKYVASKLAQ 2520
GFKRVDAEPLRPLSSEMNSQHRDEELSFNESFDRLKLNSTTHLIDDTSEQSKYVASKLAQ
Sbjct: 781 GFKRVDAEPLRPLSSEMNSQHRDEELSFNESFDRLKLNSTTHLIDDTSEQSKYVASKLAQ 840
Query: 2521 ISGDMGAQQYEGLLSIQTMLCEGSFTLWEQNFAKLLIAVFDVLSKSESDANKKVALRVLT 2700
ISGDMGAQQYEGLLSIQTMLCEGSFTLWEQNFAKLLIAVFDVLSKSESDANKKVALRVLT
Sbjct: 841 ISGDMGAQQYEGLLSIQTMLCEGSFTLWEQNFAKLLIAVFDVLSKSESDANKKVALRVLT 900
Query: 2701 KMCTSQASRLFDSTEMAICKVLDAAVNSQDGTMNVTADDCLKTLATHLPLAKVVNISQLI 2880
KMCTSQASRLFDSTEMAICKVLDAAVNSQDGTMNVTADDCLKTLATHLPLAKVVNISQLI
Sbjct: 901 KMCTSQASRLFDSTEMAICKVLDAAVNSQDGTMNVTADDCLKTLATHLPLAKVVNISQLI 960
Query: 2881 LNEEKAQEPKASLVLKMMTRLFEGLQADELSPVVDDLAPCVIKSYDSPSSAVRKTAVYCL 3060
LNEEKAQEPKASLVLKMMTRLFEGLQADELSPVVDDLAPCVIKSYDSPSSAVRKTAVYCL
Sbjct: 961 LNEEKAQEPKASLVLKMMTRLFEGLQADELSPVVDDLAPCVIKSYDSPSSAVRKTAVYCL 1020
Query: 3061 VAMVNKLGMKTMEPHLQNLSSGKLNLVQVYVNRAMSSSSHSHV 3189
VAMVNKLGMKTMEPHLQNLSSGKLNLVQVYVNRAMSSSSHSHV
Sbjct: 1021 VAMVNKLGMKTMEPHLQNLSSGKLNLVQVYVNRAMSSSSHSHV 1063
>gi|345364|pir||S30876 hypothetical protein R107.6 - Caenorhabditis
elegans
Length = 1080
Score = 1961 bits (5081), Expect = 0.0
Identities = 1021/1080 (94%), Positives = 1021/1080 (94%), Gaps = 17/1080 (1%)
Frame = +1
Query: 1 MTNPCRAISQFALDTECLFCVCKLLDFLILSIFAFFHNIYIFQMSRVISRSTPGGTCIVS 180
MTNPCRAISQFALDTECLFCVCKLLDFLILSIFAFFHNIYIFQMSRVISRSTPGGTCIVS
Sbjct: 1 MTNPCRAISQFALDTECLFCVCKLLDFLILSIFAFFHNIYIFQMSRVISRSTPGGTCIVS 60
Query: 181 KDDFLKSFEEVPKMEISSPSDFKEKLDQTIETLSKGQEDWNKRMNKLKQIRSMVVHGEDV 360
KDDFLKSFEEVPKMEISSPSDFKEKLDQTIETLSKGQEDWNKRMNKLKQIRSMVVHGEDV
Sbjct: 61 KDDFLKSFEEVPKMEISSPSDFKEKLDQTIETLSKGQEDWNKRMNKLKQIRSMVVHGEDV 120
Query: 361 IGREQLLSQLVRLTDCLDLSVKDLRSQILREAAITCGFLFKRFGTDVRQIAERCLPSAFA 540
IGREQLLSQLVRLTDCLDLSVKDLRSQILREAAITCGFLFKRFGTDVRQIAERCLPSAFA
Sbjct: 121 IGREQLLSQLVRLTDCLDLSVKDLRSQILREAAITCGFLFKRFGTDVRQIAERCLPSAFA 180
Query: 541 QVAVSTKVMATCGAVLTLFIVEFIQTKQIFTCIASYSTSKDKNQRRQLCALLEIVLEHWN 720
QVAVSTKVMATCGAVLTLFIVEFIQTKQIFTCIASYSTSKDKNQRRQLCALLEIVLEHWN
Sbjct: 181 QVAVSTKVMATCGAVLTLFIVEFIQTKQIFTCIASYSTSKDKNQRRQLCALLEIVLEHWN 240
Query: 721 EKIKRTVLPQIGELIKAAICDADPETRVAGRKAFSKLDALHSTEADKLFASVDSSKQKML 900
EKIKRTVLPQIGELIKAAICDADPETRVAGRKAFSKLDALHSTEADKLFASVDSSKQKML
Sbjct: 241 EKIKRTVLPQIGELIKAAICDADPETRVAGRKAFSKLDALHSTEADKLFASVDSSKQKML 300
Query: 901 RXXXXXXXXXXXXXERGTAPFRSKLSAGSIGGIRNAPNISSKFLAQRSASAIDTKQVTRM 1080
R ERGTAPFRSKLSAGSIGGIRNAPNISSKFLAQRSASAIDTKQVTRM
Sbjct: 301 RASDAASSSTSINSERGTAPFRSKLSAGSIGGIRNAPNISSKFLAQRSASAIDTKQVTRM 360
Query: 1081 ATSVSRTPNIRPMTTRTLSKIDTSPGGSKFARPTVGALGSRTSSNLRARGSVPTXXXXXX 1260
ATSVSRTPNIRPMTTRTLSKIDTSPGGSKFARPTVGALGSRTSSNLRARGSVPT
Sbjct: 361 ATSVSRTPNIRPMTTRTLSKIDTSPGGSKFARPTVGALGSRTSSNLRARGSVPTSQPGSR 420
Query: 1261 XXXXXXXXXATEAFPAEMQRVKSNLGSNSFVSSLSAEEATKLQKAMNTAKESLRQPSRND 1440
ATEAFPAEMQRVKSNLGSNSFVSSLSAEEATKLQKAMNTAKESLRQPSRND
Sbjct: 421 NGSPPRRPSATEAFPAEMQRVKSNLGSNSFVSSLSAEEATKLQKAMNTAKESLRQPSRND 480
Query: 1441 DDEFLLPKRPTPQKATPQKSALDTSRVEEVIRACSSTSANEKREGIKMLAGIVSEPNLSN 1620
DDEFLLPKRPTPQKATPQKSALDTSRVEEVIRACSSTSANEKREGIKMLAGIVSEPNLSN
Sbjct: 481 DDEFLLPKRPTPQKATPQKSALDTSRVEEVIRACSSTSANEKREGIKMLAGIVSEPNLSN 540
Query: 1621 AEIKSLGAVLNRLLGESTNQIVLESISSFVKTHHPRLSDWXXXXXXXXXXXXXXEMTLNS 1800
AEIKSLGAVLNRLLGESTNQIVLESISSFVKTHHPRLSDW EMTLNS
Sbjct: 541 AEIKSLGAVLNRLLGESTNQIVLESISSFVKTHHPRLSDWLKLGLGKLFAKKGAEMTLNS 600
Query: 1801 KKQISTTISCILSSFDPTLQLKSTCELVCDPIHLMSPKSRVVLLEYLNELLGKYMERGSS 1980
KKQISTTISCILSSFDPTLQLKSTCELVCDPIHLMSPKSRVVLLEYLNELLGKYMERGSS
Sbjct: 601 KKQISTTISCILSSFDPTLQLKSTCELVCDPIHLMSPKSRVVLLEYLNELLGKYMERGSS 660
Query: 1981 FNTKEMKATILKMFSWMADQRNEQLITPHGEKVLCSLFALNNADFSALFNDFNPDYRDWA 2160
FNTKEMKATILKMFSWMADQRNEQLITPHGEKVLCSLFALNNADFSALFNDFNPDYRDWA
Sbjct: 661 FNTKEMKATILKMFSWMADQRNEQLITPHGEKVLCSLFALNNADFSALFNDFNPDYRDWA 720
Query: 2161 YKVLQSHGHDQHVPQQDAVSEEACVRATISTTAAQIEDFVVSRNLDMTPVKSPSTRAISS 2340
YKVLQSHGHDQHVPQQDAVSEEACVRATISTTAAQIEDFVVSRNLDMTPVKSPSTRAISS
Sbjct: 721 YKVLQSHGHDQHVPQQDAVSEEACVRATISTTAAQIEDFVVSRNLDMTPVKSPSTRAISS 780
Query: 2341 GFKRVDAEPLRPLSSEMNSQHRDEELSFNESFDRLKLNSTTHLIDDTSEQSKYVASKLAQ 2520
GFKRVDAEPLRPLSSEMNSQHRDEELSFNESFDRLKLNSTTHLIDDTSEQSKYVASKLAQ
Sbjct: 781 GFKRVDAEPLRPLSSEMNSQHRDEELSFNESFDRLKLNSTTHLIDDTSEQSKYVASKLAQ 840
Query: 2521 ISGDMGAQQYEGLLSIQTMLCEGSFTLWEQNFAKLLIAVFDVLSKSESDANKKVALRVLT 2700
ISGDMGAQQYEGLLSIQTMLCEGSFTLWEQNFAKLLIAVFDVLSKSESDANKKVALRVLT
Sbjct: 841 ISGDMGAQQYEGLLSIQTMLCEGSFTLWEQNFAKLLIAVFDVLSKSESDANKKVALRVLT 900
Query: 2701 KMCTSQASRLFDSTEMAICKVLDAAVNSQDGTMNVTADDCLKTLATHLPLAKVVNISQLI 2880
KMCTSQASRLFDSTEMAICKVLDAAVNSQDGTMNVTADDCLKTLATHLPLAKVVNISQLI
Sbjct: 901 KMCTSQASRLFDSTEMAICKVLDAAVNSQDGTMNVTADDCLKTLATHLPLAKVVNISQLI 960
Query: 2881 LNEEKAQEPKASLVLKMMTRLFEGLQADELSPVVDDLAPCVIK----------------- 3009
LNEEKAQEPKASLVLKMMTRLFEGLQADELSPVVDDLAPCVIK
Sbjct: 961 LNEEKAQEPKASLVLKMMTRLFEGLQADELSPVVDDLAPCVIKVTIYQTSQFINEIFTLQ 1020
Query: 3010 SYDSPSSAVRKTAVYCLVAMVNKLGMKTMEPHLQNLSSGKLNLVQVYVNRAMSSSSHSHV 3189
SYDSPSSAVRKTAVYCLVAMVNKLGMKTMEPHLQNLSSGKLNLVQVYVNRAMSSSSHSHV
Sbjct: 1021 SYDSPSSAVRKTAVYCLVAMVNKLGMKTMEPHLQNLSSGKLNLVQVYVNRAMSSSSHSHV 1080
>gi|39590667|emb|CAE65037.1| Hypothetical protein CBG09877
[Caenorhabditis briggsae]
Length = 865
Score = 1072 bits (2772), Expect = 0.0
Identities = 547/776 (70%), Positives = 635/776 (81%), Gaps = 3/776 (0%)
Frame = +1
Query: 130 MSRVISRSTPGGTCIVSKDDFLKSFEEVPKMEISSPSDFKEKLDQTIETLSKGQEDWNKR 309
MSRV+SR+ PGG C+V+KDDFLKSF +V K+ +SS +D K K DQ I LSK QEDWNKR
Sbjct: 1 MSRVVSRTVPGGACVVNKDDFLKSFNDVDKVSVSSLADAKSKFDQVIAILSKSQEDWNKR 60
Query: 310 MNKLKQIRSMVVHGEDVIGREQLLSQLVRLTDCLDLSVKDLRSQILREAAITCGFLFKRF 489
+L+ IRS+V++ EDVIGR+QLL QLVRL DCLDLSVKDLRSQILREAAITC FLF+++
Sbjct: 61 RTQLQIIRSIVINCEDVIGRDQLLGQLVRLADCLDLSVKDLRSQILREAAITCSFLFEKY 120
Query: 490 GTDVRQIAERCLPSAFAQVAVSTKVMATCGAVLTLFIVEFIQTKQIFTCIASYSTSKDKN 669
G DV QIAERCLP+AF+Q+AVSTKVMAT GA LTLF+V+++QTKQIFTC+ +YSTSKDKN
Sbjct: 121 GNDVHQIAERCLPTAFSQLAVSTKVMATSGATLTLFLVQYVQTKQIFTCLTTYSTSKDKN 180
Query: 670 QRRQLCALLEIVLEHWNEKIKRTVLPQIGELIKAAICDADPETRVAGRKAFSKLDALHST 849
QRRQLC LLEIV+EHWN+K+K+++LPQI ELIK+AI DADPETR AGRKAF+KLDA+HS
Sbjct: 181 QRRQLCVLLEIVIEHWNDKLKKSILPQIMELIKSAISDADPETRAAGRKAFNKLDAIHSE 240
Query: 850 EADKLFASVDSSKQKMLRXXXXXXXXXXXXXERGTAPFRSKLSAGSIGGIRNAPNISSKF 1029
EADKLFASVD++KQKMLR ERG+APFRSKLSAGS+GG+RN PNISSKF
Sbjct: 241 EADKLFASVDANKQKMLRASDAASSSTSVNSERGSAPFRSKLSAGSVGGMRNVPNISSKF 300
Query: 1030 LAQRSASAIDTKQVTRMATSVSRTPNIRPMTTRTLSKIDTSPGGSKFARPTVGALGSRTS 1209
LAQRSASAIDTKQVTRM TSVSRTPN RPMTTRTLSK+DTSPGGSKFARPTVG LG RT+
Sbjct: 301 LAQRSASAIDTKQVTRMTTSVSRTPNTRPMTTRTLSKVDTSPGGSKFARPTVGTLGPRTT 360
Query: 1210 SNLRARGSVPTXXXXXXXXXXXXXXXATEAFPAEMQRVKSNLGSNSFVSSLSAEEATKLQ 1389
SNLRARGSVPT T P EMQRVKSNLGS+SFVSSL+ ++A LQ
Sbjct: 361 SNLRARGSVPTSQPGSRNGSPPRRPSTTGTLPMEMQRVKSNLGSSSFVSSLTPDQAESLQ 420
Query: 1390 KAMNTAKESLRQPSRNDDDEFLLPKRPTPQKATPQKSALDTSRVEEVIRACSSTSANEKR 1569
KAMNTAKESL QPSR +DDEFLLPKR + TPQKSA+D SRVE VIRAC STSANEKR
Sbjct: 421 KAMNTAKESLGQPSRTEDDEFLLPKR---KPKTPQKSAVDISRVEAVIRACVSTSANEKR 477
Query: 1570 EGIKMLAGIVSEPNLSNAEIKSLGAVLNRLLGESTNQIVLESISSFVKTHHPRLSDWXXX 1749
+GIKML+ IVSEPNLS E+K++G VLNRLLGE+TN +VLES++SFVK HH RLS+W
Sbjct: 478 DGIKMLSIIVSEPNLSQIELKNIGQVLNRLLGEATNPVVLESVASFVKAHHSRLSEWLKL 537
Query: 1750 XXXXXXXXXXXEMTLNSKKQISTTISCILSSFDPTLQLKSTCELVCDPIHLMSPKSRVVL 1929
EM KK I TTI+ ILSSFDP LQLK+TCEL+CDPIHL+SPK+RV L
Sbjct: 538 GLGKMFAKKGSEMMPIMKKHIVTTINAILSSFDPALQLKATCELMCDPIHLLSPKARVAL 597
Query: 1930 LEYLNELLGKYMERGSSFNTKEMKATILKMFSWMADQRNEQLITPHGEKVLCSLFALNNA 2109
LEYL +LL K+MERGS FNTKE+KATILKMFSWM+DQRN Q I PHGEKVLC LFALN A
Sbjct: 598 LEYLTDLLEKHMERGSPFNTKEVKATILKMFSWMSDQRNMQQIVPHGEKVLCGLFALNAA 657
Query: 2110 DFSALFNDFNPDYRDWAYKVLQSHGHDQHVPQQDAVS--EEACVRATISTTAAQIEDFVV 2283
DFSALFNDFNPDYR+WAY++LQ+HGH+QH P ++ S + VRA IS TAAQIEDFVV
Sbjct: 658 DFSALFNDFNPDYREWAYRILQAHGHNQHAPAPESPSPVRDQQVRANISNTAAQIEDFVV 717
Query: 2284 SRNLDMTPVKSPSTRA-ISSGFKRVDAEPLRPLSSEMNSQHRDEELSFNESFDRLK 2448
+RN +++ KSP++R ++SGFKR DAEPLRPL S+MN+Q D ++S NESFDRLK
Sbjct: 718 ARNFELSAEKSPTSRGMLTSGFKRTDAEPLRPLESDMNTQRMD-DISINESFDRLK 772
>gi|39582028|emb|CAE64459.1| Hypothetical protein CBG09173
[Caenorhabditis briggsae]
Length = 1346
Score = 711 bits (1835), Expect = 0.0
Identities = 416/1048 (39%), Positives = 607/1048 (57%), Gaps = 37/1048 (3%)
Frame = +1
Query: 145 SRSTPGGTCIVSKDDFLKSFEEVPKMEISSPSDFKEKLDQTIETLSKGQEDWNKRMNKLK 324
S P C ++ DDF K+F VPK+ I S SD +EKL+ L EDW+KR N+LK
Sbjct: 331 SSCAPAAQCAITLDDFKKAFNAVPKISIYSNSDVREKLETANSVLRNANEDWSKRANQLK 390
Query: 325 QIRSMVVHGEDVIGREQLLSQLVRLTDCLDLSVKDLRSQILREAAITCGFLFKRFGTDVR 504
IRS++++ +D I + LLS + L D L+ S++DLRSQI+REAAITC FLF+ FG DVR
Sbjct: 391 LIRSVILNSDDSIDQRLLLSLINELADALEFSIRDLRSQIVREAAITCSFLFEHFGMDVR 450
Query: 505 QIAERCLPSAFAQVAVSTKVMATCGAVLTLFIVEFIQTKQIFTCIASYSTSKDKNQRRQL 684
+AE LP+A AQVAVSTK+MA+ A LT+FIV+ IQT+QIF + STSK K QRRQL
Sbjct: 451 NVAECVLPAALAQVAVSTKIMASSAATLTVFIVQKIQTRQIFQTLFDLSTSKSKEQRRQL 510
Query: 685 CALLEIVLEHWNEKIKRTVLPQIGELIKAAICDADPETRVAGRKAFSKLDALHSTEADKL 864
LLE ++ W+ K+K+ +L I +L++ AICDAD ETRVAGRKAF+KL+ LH AD++
Sbjct: 511 ANLLETLISSWDLKVKQPILKSISQLVQNAICDADGETRVAGRKAFAKLEQLHGAAADQI 570
Query: 865 FASVDSSKQKMLRXXXXXXXXXXXXXERGTAPFRSKLSAGSIGGIRNAP-----NISSKF 1029
F +D +KQKMLR G + S L++ + P NIS KF
Sbjct: 571 FRELDPAKQKMLRD--------------GVSSSSSSLNSDRDNNNQKQPQQPQQNISQKF 616
Query: 1030 LAQRSASAIDTK-QVTRMATSVSRTPNIRPMTTRTLSKIDTSPGGSKFARPTVGALG-SR 1203
L+QRSASA+D K QV +A P+ RP +++ S S F+ G SR
Sbjct: 617 LSQRSASALDNKSQVLSIAKPQQSNPS-RPTAMPVNNRLPKSSTSSSFSAVRSSGYGQSR 675
Query: 1204 TSSNLRARGSVPTXXXXXXXXXXXXXXXATEAFPAEMQRVKSNLGSNSFVSSLSAEEATK 1383
+ G +T +QRV SNLGS+SFV+SL+ E+A+
Sbjct: 676 AKTPSDGFGGTNFNNNNNNNNKSSSSSPSTSTHQTPIQRVASNLGSSSFVASLTQEQASS 735
Query: 1384 LQKAMNTAKESLRQPSRNDDDEFLLPK-RPTPQKATPQKSAL------------------ 1506
LQ AM+ AK+ + + N+DDEFLL + R TP K T ++L
Sbjct: 736 LQNAMDLAKDEMSK--NNEDDEFLLAEVRKTPPKETSPPASLYARGYGNGSNGSNNSSNN 793
Query: 1507 DTSRVEEVIRACSSTSANEKREGIKMLAGIVSEPNLSNAEIKSLGAVLNRLLGESTNQI- 1683
VE +++AC+S+S NEKR+ I L+ + + NL + E K++G L+RLL E +
Sbjct: 794 SIQSVEHILKACTSSSINEKRDAIISLSQKLLDRNLDSLECKNIGDTLSRLLAEGNTTLI 853
Query: 1684 --VLESISSFVKTHHPRLSDWXXXXXXXXXXXXXXEMTLNSKKQISTTISCILSSFDPTL 1857
+LE+IS FVK H+ +L W + N K +S+T L++FDP+
Sbjct: 854 ISILETISIFVKCHYKKLDGWLKLALGKLFAKMGADSLPNVKSALSSTQKMFLTTFDPST 913
Query: 1858 QLKSTCELVCDPIHLMSPKSRVVLLEYLNELL-------GKYMERGSSFNTKEMKATILK 2016
QLK C+ +CDP+HL++PKSR+ LLEY+ L + +ER + +T +A + K
Sbjct: 914 QLKEVCDFMCDPVHLLAPKSRLALLEYICLLFEEIWPEDPRCLERQTQLDTPYTRAAVRK 973
Query: 2017 MFSWMADQRNEQLITPHGEKVLCSLFALNNADFSALFNDFNPDYRDWAYKVLQSHGHDQH 2196
MF+WM D R ++ P E+++C+LFALN ADF+ +F D P+ RDWAY++LQ +G Q
Sbjct: 974 MFAWMFDPRIGAILMPACERLVCALFALNAADFTMIFGDLPPECRDWAYRILQLNGQQQS 1033
Query: 2197 VPQQDAVSEEACVRATISTTAAQIEDFVVSRNLDMTPVKSPSTRAISSGFKRVDAEPLRP 2376
+Q + +E ++ F+ + + +A+S+G + V
Sbjct: 1034 AQRQQIMEKE--------YVNLFLKKFL---KIQIFQHDQQQLQAMSAGSREVRKSLGEA 1082
Query: 2377 LSSEMNSQHRDEELSFNESFDRLKLNSTTHLIDDTSEQSKYVASKLAQISGDMGAQQY-E 2553
S + E + + T HL + EQ+ Y+ +++ + + E
Sbjct: 1083 SFSTYEATRVPEPQDYRK--------PTVHLAKNHVEQAAYIRNQMDLMRDFQKPDRVNE 1134
Query: 2554 GLLSIQTMLCEGSFTLWEQNFAKLLIAVFDVLSKSESDANKKVALRVLTKMCTSQASRLF 2733
+ ++ M+CEGSFTLW Q F +LL ++ +LS KK+A+R+L KMCT+QA++LF
Sbjct: 1135 AMANLHGMMCEGSFTLWNQFFDELLDEIYQILSTLSQSIRKKLAMRILQKMCTAQATKLF 1194
Query: 2734 DSTEMAICKVLDAAVNSQDGTMNVTADDCLKTLATHLPLAKVVNISQLILNEEKAQEPKA 2913
DSTE+AI KVL A S+D TM+V A+DCL+ LATHLPL ++V IS+ IL+++ + +
Sbjct: 1195 DSTEIAISKVLQCACTSEDNTMSVAAEDCLRILATHLPLPRIVQISRRILSQDD-DDQRG 1253
Query: 2914 SLVLKMMTRLFEGLQADELSPVVDDLAPCVIKSYDSPSSAVRKTAVYCLVAMVNKLGMKT 3093
L+LKM+TR+F+ + DEL +VDD+APC + +YDS SS+VRK AV+ LVA+V ++GM
Sbjct: 1254 VLILKMLTRMFQDIDVDELHMIVDDVAPCFVSAYDSTSSSVRKCAVFGLVALVQRVGMPR 1313
Query: 3094 MEPHLQNLSSGKLNLVQVYVNRAMSSSS 3177
+E HL+ L++ KLNL+ +YV RA SS S
Sbjct: 1314 LETHLRKLNATKLNLIDLYVGRAKSSES 1341
>gi|17552110|ref|NP_498649.1| CLIP-associating protein 2 family member
(3I603) [Caenorhabditis elegans]
gi|15487557|gb|AAK85441.2| Hypothetical protein C07H6.3
[Caenorhabditis elegans]
Length = 1378
Score = 706 bits (1823), Expect = 0.0
Identities = 424/1071 (39%), Positives = 609/1071 (56%), Gaps = 60/1071 (5%)
Frame = +1
Query: 145 SRSTPGGTCIVSKDDFLKSFEEVPKMEISSPSDFKEKLDQTIETLSKGQEDWNKRMNKLK 324
S P C ++ DDF KSF VPK I S D +EKL+ L EDW+KR N+LK
Sbjct: 340 SSCAPAAQCAITLDDFKKSFTAVPKTTIYSNHDIREKLELANLVLRNANEDWSKRANQLK 399
Query: 325 QIRSMVVHGEDVIGREQLLSQLVRLTDCLDLSVKDLRSQILREAAITCGFLFKRFGTDVR 504
IRS++++ ++ I R L+S + L D L+ S++DLRSQI+REAA+TC FLF+ FG +V+
Sbjct: 400 LIRSIIINCDENIDRSLLISIINELADALEFSIRDLRSQIVREAAVTCSFLFETFGMEVK 459
Query: 505 QIAERCLPSAFAQVAVSTKVMATCGAVLTLFIVEFIQTKQIFTCIASYSTSKDKNQRRQL 684
+AE LP+A AQVAVSTKV+A+ A LT+FIV+ IQT+QIFT ++ S+SK K QRRQL
Sbjct: 460 NVAECVLPAALAQVAVSTKVIASSAATLTVFIVQKIQTRQIFTTLSELSSSKAKEQRRQL 519
Query: 685 CALLEIVLEHWNEKIKRTVLPQIGELIKAAICDADPETRVAGRKAFSKLDALHSTEADKL 864
+LE ++ W+ K K+ +L QI +L++ AICDAD ETRVAGRKAF+KL+ LH T AD +
Sbjct: 520 AVVLETLIASWDLKSKQPILKQIAQLVQNAICDADGETRVAGRKAFAKLEQLHGTTADLI 579
Query: 865 FASVDSSKQKMLRXXXXXXXXXXXXXERGTAPFRSKLSAGSIGGIRNAPNISSKFLAQRS 1044
F +D +KQKMLR + N NIS KFL+QRS
Sbjct: 580 FRELDPAKQKMLRDGVSSSSSSLNSDRDNNNQKQQP----------NQQNISQKFLSQRS 629
Query: 1045 ASAIDTK---QVTRMATSVSRTPNIRPMTTRTLSKIDTSPGGSKFARPTVGALGSRTSSN 1215
ASA+D V T++ P PM R L K TS S G S T +
Sbjct: 630 ASAVDKSIQLSVKPQTTAIPSRPTAMPMNNR-LPKSSTSTSFSAVRSSGYGQNQSTTPNR 688
Query: 1216 LRA-----RGSVPTXXXXXXXXXXXXXXXATEAFPAEMQRVKSNLGSNSFVSSLSAEEAT 1380
+ GS P +T +QRV SNLGS+SFV+SL+ E+A
Sbjct: 689 AKTPSDGFAGSSPHYTNGNNNNKSSSSSPSTSTHQTPIQRVASNLGSSSFVASLTQEQAN 748
Query: 1381 KLQKAMNTAKESLRQPSRNDDDEFLLPK-RPTPQKATPQK--------SALDTS------ 1515
LQ AMNTAK+ + + N+DDEFLL + R TP K P+ S LD+S
Sbjct: 749 CLQNAMNTAKDEMSK--NNEDDEFLLDEIRKTPPKEVPRSYNNSPFKPSNLDSSVHRSYN 806
Query: 1516 ---------------------RVEEVIRACSSTSANEKREGIKMLAGIVSEPNLSNAEIK 1632
+E +++AC+S+S NEKR+ I L ++++PNL E K
Sbjct: 807 NNSPFRPSSGSVGSGSNGSVQSIEHILKACTSSSLNEKRDAIVNLNQVITDPNLCQLECK 866
Query: 1633 SLGAVLNRLLGESTNQIV---LESISSFVKTHHPRLSDWXXXXXXXXXXXXXXEMTLNSK 1803
++G L+RLL E N ++ L++IS F+K + +L +W + N K
Sbjct: 867 NIGDTLSRLLAEGNNTLIISILDTISIFIKFQYKKLDNWLKLALGKLFAKMGADALPNVK 926
Query: 1804 KQISTTISCILSSFDPTLQLKSTCELVCDPIHLMSPKSRVVLLEYLNELLGKY------- 1962
+S+T L++FDPT QLK+ C+ +CDP+HL+SPKSR+ LLEY+ L +
Sbjct: 927 SALSSTQKMFLTTFDPTFQLKAVCDFMCDPVHLLSPKSRLALLEYICLLFEEIWPEDPRC 986
Query: 1963 MERGSSFNTKEMKATILKMFSWMADQRNEQLITPHGEKVLCSLFALNNADFSALFNDFNP 2142
+ER + +T +A I KMF+WM D R ++ P E+++C+LFALN ADF+ +F +
Sbjct: 987 LERQTHLDTPYTRAAIRKMFAWMFDPRIGAILMPACERLVCALFALNAADFTMIFGELPS 1046
Query: 2143 DYRDWAYKVLQSHGHDQHVPQQDAVSEEACVRATISTTAAQIEDFVVSRN-----LDMTP 2307
+ RDWAY++LQ +G + Q + +E E F+ + N LD
Sbjct: 1047 ECRDWAYRILQLNGQQNN---QKPIEKEK-------------ERFISNNNYKPCPLDNEE 1090
Query: 2308 VKSPSTRAISSGFKRVDAEPLRPLSSEMNSQHRDEELSFNESFDRLKLNSTTHLIDDTSE 2487
++ P + S + E R S+ + + S D ST HL + +
Sbjct: 1091 IEKPIMKTTYSTY-----ESTRKEYSQTERIATENQYSTPPPPDYR--TSTAHLAKNHVD 1143
Query: 2488 QSKYVASKLAQISGDMGAQQY-EGLLSIQTMLCEGSFTLWEQNFAKLLIAVFDVLSKSES 2664
Q+ Y+ ++L I A + E + ++ M+CEGSFTLW Q F +LL +++ +LS
Sbjct: 1144 QAAYIRNQLDAIRDFEKADKLNEAMANLHGMMCEGSFTLWNQFFDELLDSIYQILSTFSQ 1203
Query: 2665 DANKKVALRVLTKMCTSQASRLFDSTEMAICKVLDAAVNSQDGTMNVTADDCLKTLATHL 2844
KK+ALR+L KMCT+QA++LFDSTE+AI KVL A S D TM V A+DCL+ LA+HL
Sbjct: 1204 SIRKKLALRILQKMCTAQATKLFDSTEIAISKVLQCACTSDDNTMGVAAEDCLRILASHL 1263
Query: 2845 PLAKVVNISQLILNEEKAQEPKASLVLKMMTRLFEGLQADELSPVVDDLAPCVIKSYDSP 3024
PL +VV IS+ IL+++ + + L+LKM+TR+F+ + +EL +V+D+APC + +Y+S
Sbjct: 1264 PLTRVVLISRRILSQDD-DDQRGVLILKMLTRMFQDIDIEELHLIVNDVAPCFVTAYESM 1322
Query: 3025 SSAVRKTAVYCLVAMVNKLGMKTMEPHLQNLSSGKLNLVQVYVNRAMSSSS 3177
SS VRK AV+ LVA+V ++GM+ MEPHL+ L++ KLNL+ +YV RA SS S
Sbjct: 1323 SSTVRKCAVFGLVALVQRVGMQRMEPHLRTLNASKLNLIDLYVGRAKSSES 1373