Homology by BLASTX


BLASTX 2.2.4 [Aug-26-2002]
Query= R102_3
         (378 letters)

Database: /home/niguts/usr02/tshini/ykclst/db/nr.seq
           1,967,186 sequences; 661,712,633 total letters


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|17541950|ref|NP_501975.1| putative cytoplasmic protein family...   231   2e-60
gi|25348080|pir||C88817 protein R102.2 [imported] - Caenorhabdit...   207   5e-53
gi|39581867|emb|CAE60761.1| Hypothetical protein CBG04448 [Caeno...   175   2e-43
gi|17541948|ref|NP_501974.1| putative protein family member (4L4...   160   7e-39
gi|17559876|ref|NP_504945.1| predicted CDS, putative cytoplasmic...   155   2e-37
gi|17543336|ref|NP_502810.1| predicted CDS, putative cytoplasmic...   154   5e-37
gi|17543334|ref|NP_502811.1| predicted CDS, putative protein (4P...    54   8e-09
gi|32453022|gb|AAP82658.1| Hypothetical protein F09E10.7a [Caeno...    32   3.0
gi|17551552|ref|NP_508285.1| putative cytoplasmic protein of anc...    32   3.0
gi|32453023|gb|AAP82659.1| Hypothetical protein F09E10.7b [Caeno...    32   3.0
gi|18071242|ref|NP_542287.1| unknown [Sinorhizobium meliloti pha...    32   3.9
gi|39596375|emb|CAE70013.1| Hypothetical protein CBG16427 [Caeno...    31   6.6
gi|46128383|ref|XP_388745.1| hypothetical protein FG08569.1 [Gib...    31   6.6
gi|7487572|pir||T00443 hypothetical protein T30B22.29 - Arabidop...    30   8.6
gi|50731877|ref|XP_418398.1| PREDICTED: similar to zinc transpor...    30   8.6
gi|46320193|ref|ZP_00220585.1| COG4319: Ketosteroid isomerase ho...    30   8.6
gi|25409048|pir||H84914 probable WD-40 repeat protein [imported]...    30   8.6
gi|22135972|gb|AAM91568.1| putative WD-40 repeat protein [Arabid...    30   8.6
gi|42570440|ref|NP_850474.2| transducin family protein / WD-40 r...    30   8.6


>gi|17541950|ref|NP_501975.1| putative cytoplasmic protein family
           member (13.7 kD) (4L453) [Caenorhabditis elegans]
 gi|7506539|pir||T24104 hypothetical protein R102.2 - Caenorhabditis
           elegans
 gi|5824565|emb|CAA94356.2| Hypothetical protein R102.2
           [Caenorhabditis elegans]
          Length = 125

 Score =  231 bits (590), Expect = 2e-60
 Identities = 113/125 (90%), Positives = 113/125 (90%)
 Frame = +1

Query: 1   MSKAEFQKFHDEMKALKNAGKHDEXXXXXXXXXXXXIGPLHDPCTADEAAKLAQSDKMAA 180
           MSKAEFQKFHDEMKALKNAGKHDE            IGPLHDPCTADEAAKLAQSDKMAA
Sbjct: 1   MSKAEFQKFHDEMKALKNAGKHDEFAKKFAAKDAVFIGPLHDPCTADEAAKLAQSDKMAA 60

Query: 181 LVKADFDVKIDEVTQIGDVVVERCSISAKLPTGDKNGWSLTVWVKEGGAWKIRNSCITFK 360
           LVKADFDVKIDEVTQIGDVVVERCSISAKLPTGDKNGWSLTVWVKEGGAWKIRNSCITFK
Sbjct: 61  LVKADFDVKIDEVTQIGDVVVERCSISAKLPTGDKNGWSLTVWVKEGGAWKIRNSCITFK 120

Query: 361 APIPQ 375
           APIPQ
Sbjct: 121 APIPQ 125




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